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McCollough, Cynthia H.

https://orcid.org/0000-0002-5346-332X

Mayo Clinic

Mayo Clinic

Citations 202

An interactive eye‐tracking system for measuring radiologists' visual fixations in volumetric CT images: Implementation and initial eye‐tracking accuracy validation
Gong, Hao , Hsieh, Scott S. , Holmes, David R. , Cook, David A. , Bartlett, David J. , Baffour, Francis , Takahashi, Hiroaki , Yu, Lifeng , Inoue, Akitoshi , Baffour, Francis I , Leng, Shuai , Yu, Lifeng , McCollough, Cynthia H. , Fletcher, Joel G. , Takahashi, Hiroaki

Medical Physics | September 17, 2021 | Volume: 48 | Issue: 11 | Pages: 6710-6723

10.1002/mp.15219 Get It

AbstractPurposeEye‐tracking approaches have been used to understand the visual search process in radiology. However, previous eye‐tracking work in computer tomography (CT) has been limited largely to single cross‐sectional images or video playback of the reconstructed volume, which do not accurately reflect radiologists' visual search activities and their interactivity with three‐dimensional image data at a computer workstation (e.g., scroll, pan, and zoom) for visual evaluation of diagnostic imaging targets. We have developed a platform that integrates eye‐tracking hardware with in‐house‐developed reader workstation software to allow monitoring of the visual search process and reader‐image interactions in clinically relevant reader tasks. The purpose of this work is to validate the spatial accuracy of eye‐tracking data using this platform for different eye‐tracking data acquisition modes.MethodsAn eye‐tracker was integrated with a previously developed workstation designed for reader performance studies. The integrated system captured real‐time eye movement and workstation events at 1000 Hz sampling frequency. The eye‐tracker was operated either in head‐stabilized mode or in free‐movement mode. In head‐stabilized mode, the reader positioned their head on a manufacturer‐provided chinrest. In free‐movement mode, a biofeedback tool emitted an audio cue when the head position was outside the data collection range (general biofeedback) or outside a narrower range of positions near the calibration position (strict biofeedback). Four radiologists and one resident were invited to participate in three studies to determine eye‐tracking spatial accuracy under three constraint conditions: head‐stabilized mode (i.e., with use of a chin rest), free movement with general biofeedback, and free movement with strict biofeedback. Study 1 evaluated the impact of head stabilization versus general or strict biofeedback using a cross‐hair target prior to the integration of the eye‐tracker with the image viewing workstation. In Study 2, after integration of the eye‐tracker and reader workstation, readers were asked to fixate on targets that were randomly distributed within a volumetric digital phantom. In Study 3, readers used the integrated system to scroll through volumetric patient CT angiographic images while fixating on the centerline of designated blood vessels (from the left coronary artery to dorsalis pedis artery). Spatial accuracy was quantified as the offset between the center of the intended target and the detected fixation using units of image pixels and the degree of visual angle.ResultsThe three head position constraint conditions yielded comparable accuracy in the studies using digital phantoms. For Study 1 involving the digital crosshairs, the median ± the standard deviation of offset values among readers were 15.2 ± 7.0 image pixels with the chinrest, 14.2 ± 3.6 image pixels with strict biofeedback, and 19.1 ± 6.5 image pixels with general biofeedback. For Study 2 using the random dot phantom, the median ± standard deviation offset values were 16.7 ± 28.8 pixels with use of a chinrest, 16.5 ± 24.6 pixels using strict biofeedback, and 18.0 ± 22.4 pixels using general biofeedback, which translated to a visual angle of about 0.8° for all three conditions. We found no obvious association between eye‐tracking accuracy and target size or view time. In Study 3 viewing patient images, use of the chinrest and strict biofeedback demonstrated comparable accuracy, while the use of general biofeedback demonstrated a slightly worse accuracy. The median ± standard deviation of offset values were 14.8 ± 11.4 pixels with use of a chinrest, 21.0 ± 16.2 pixels using strict biofeedback, and 29.7 ± 20.9 image pixels using general biofeedback. These corresponded to visual angles ranging from 0.7° to 1.3°.ConclusionsAn integrated eye‐tracker system to assess reader eye movement and interactive viewing in relation to imaging targets demonstrated reasonable spatial accuracy for assessment of visual fixation. The head‐free movement condition with audio biofeedback performed similarly to head‐stabilized mode.
CT Noise-Reduction Methods for Lower-Dose Scanning: Strengths and Weaknesses of Iterative Reconstruction Algorithms and New Techniques
Mohammadinejad, Payam , Mileto, Achille , Yu, Lifeng , Leng, Shuai , Guimarães, Luís , Missert, A. , Jensen, Corey T. , Gong, Hao , McCollough, Cynthia H. , Fletcher, Joel G. , Guimaraes, Luis S , Missert, Andrew D , Fletcher, Joel G , McCollough, Cynthia H , Leng, Shuai , Mohammadinejad, Payam , Yu, Lifeng

RadioGraphics | September 1, 2021 | Volume: 41 | Issue: 5 | Pages: 1493-1508

10.1148/rg.2021200196 Get It

Deep learning enabled ultra‐fast‐pitch acquisition in clinical X‐ray computed tomography
Gong, Hao , Ren, Liqiang , Hsieh, Scott S. , Yu, Lifeng , Gong, Hao , McCollough, Cynthia H. , Yu, Lifeng

Medical Physics | August 20, 2021 | Volume: 48 | Issue: 10 | Pages: 5712-5726

10.1002/mp.15176 Get It

AbstractObjectiveIn X‐raycomputed tomography (CT), many important clinical applications may benefit from a fast acquisition speed. The helical scan is the most widely used acquisition mode in clinical CT, where a fast helical pitch can improve the acquisition speed. However, on a typical single‐source helical CT (SSCT) system, the helical pitch p typically cannot exceed 1.5; otherwise, reconstruction artifacts will result from data insufficiency. The purpose of this work is to develop a deep convolutional neural network (CNN) to correct for artifacts caused by an ultra‐fast pitch, which can enable faster acquisition speed than what is currently achievable.MethodsA customized CNN (denoted as ultra‐fast‐pitch network (UFP‐net)) was developed to restore the underlying anatomical structure from the artifact‐corrupted post‐reconstruction data acquired from SSCT with ultra‐fast pitch (i.e., p ≥ 2). UFP‐net employed residual learning to capture the features of image artifacts. UFP‐net further deployed in‐house‐customized functional blocks with spatial‐domain local operators and frequency‐domain non‐local operators, to explore multi‐scale feature representation. Images of contrast‐enhanced patient exams (n = 83) with routine pitch setting (i.e., p < 1) were retrospectively collected, which were used as training and testing datasets. This patient cohort involved CT exams over different scan ranges of anatomy (chest, abdomen, and pelvis) and CT systems (Siemens Definition, Definition Flash, Definition AS+, Siemens Healthcare, Inc.), and the corresponding base CT scanning protocols used consistent settings of major scan parameters (e.g., collimation and pitch). Forward projection of the original images was calculated to synthesize helical CT scans with one regular pitch setting (p = 1) and two ultra‐fast‐pitch setting (p = 2 and 3). All patient images were reconstructed using the standard filtered‐back‐projection (FBP) algorithm. A customized multi‐stage training scheme was developed to incrementally optimize the parameters of UFP‐net, using ultra‐fast‐pitch images as network inputs and regular pitch images as labels. Visual inspection was conducted to evaluate image quality. Structural similarity index (SSIM) and relative root‐mean‐square error (rRMSE) were used as quantitative quality metrics.ResultsThe UFP‐net dramatically improved image quality over standard FBP at both ultra‐fast‐pitch settings. At p = 2, UFP‐net yielded higher mean SSIM (> 0.98) with lower mean rRMSE (< 2.9%), compared to FBP (mean SSIM < 0.93; mean rRMSE > 9.1%). Quantitative metrics at p = 3: UFP‐net—mean SSIM [0.86, 0.94] and mean rRMSE [5.0%, 8.2%]; FBP—mean SSIM [0.36, 0.61] and mean rRMSE [36.0%, 58.6%].ConclusionThe proposed UFP‐net has the potential to enable ultra‐fast data acquisition in clinical CT without sacrificing image quality. This method has demonstrated reasonable generalizability over different body parts when the corresponding CT exams involved consistent base scan parameters.
The utility of a dual-phase, dual-energy CT protocol in patients presenting with overt gastrointestinal bleeding
Mohammadinejad, Payam , Kwapisz, Lukasz , Fidler, Jeff L. , Sheedy, Shannon P. , Heiken, Jay P. , Wells, Michael , Froemming, Adam T. , Hansel, Stephanie L. , Lee, Yong S. , Halaweish, Ahmed F., Bruining, David H. , Wells, Michael L, Hansel, Stephanie L , Inoue, Akitoshi , Fletcher, Joel G , Mohammadinejad, Payam, Fidler, Jeff L. , Khandelwal, Ashish , McCollough, Cynthia H. , Fletcher, Joel G.

Acta Radiologica Open | July 27, 2021 | Volume: 10 | Issue: 7 | Pages: No page available

10.1177/20584601211030658 Get It

Background Due to their easy accessibility, CT scans have been increasingly used for investigation of gastrointestinal (GI) bleeding. Purpose To estimate the performance of a dual-phase, dual-energy (DE) GI bleed CT protocol in patients with overt GI bleeding in clinical practice and examine the added value of portal phase and DE images. Materials and Methods Consecutive patients with GI bleeding underwent a two-phase DE GI bleed CT protocol. Two gastroenterologists established the reference standard. Performance was estimated using clinical CT reports. Three GI radiologists rated confidence in GI bleeding in a subset of 62 examinations, evaluating first mixed kV arterial images, then after examining additional portal venous phase images, and finally after additional DE images (virtual non-contrast and virtual monoenergetic 50 keV images). Results 52 of 176 patients (29.5%) had GI bleeding by the reference standard. The overall sensitivity, specificity, and positive and negative predictive values of the CT GI bleed protocol for detecting GI bleeding were 65.4%, 89.5%, 72.3%, and 86.0%, respectively. In patients with GI bleeding, diagnostic confidence of readers increased after adding portal phase images to arterial phase images ( p = 0.002), without additional benefit from dual energy images. In patients without GI bleeding, confidence in luminal extravasation appropriately decreased after adding portal phase, and subsequently DE images ( p = 0.006, p = 0.018). Conclusion A two-phase DE GI bleed CT protocol had high specificity and negative predictive value in clinical practice. Portal venous phase images improved diagnostic confidence in comparison to arterial phase images alone. Dual-energy images further improved radiologist confidence in the absence of bleeding.
Comments on Computed Tomography for Evaluating Appendicitis
Jordan, David W. , Dauer, Lawrence T. , McCollough, Cynthia H.

JAMA Surgery | July 21, 2021 | Volume: 156 | Issue: 11 | Pages: 1072

10.1001/jamasurg.2021.3207 Get It

Full field-of-view, high-resolution, photon-counting detector CT: technical assessment and initial patient experience
Rajendran, Kishore , Petersilka, Martin, Henning, André , Shanblatt, Elisabeth R. , Marsh, Jeffrey F., Thorne, Jamison E. , Schmidt, Bernhard , Flohr, Thomas , Marsh, Jeffrey, Thorne, Jamison, Fletcher, Joel, McCollough, Cynthia, Rajendran, Kishore , Fletcher, Joel G. , McCollough, Cynthia H. , Leng, Shuai

Physics in Medicine & Biology | July 16, 2021 | Volume: 66 | Issue: 20 | Pages: 205019

10.1088/1361-6560/ac155e Get It

Abstract We report a comprehensive evaluation of a full field-of-view (FOV) photon-counting detector (PCD) computed tomography (CT) system using phantoms, and qualitatively assess image quality in patient examples. A whole-body PCD-CT system with 50 cm FOV, 5.76 cm z-detector coverage and two acquisition modes (standard: 144 × 0.4 mm collimation and ultra-high resolution (UHR): 120 × 0.2 mm collimation) was used in this study. Phantoms were scanned to assess image uniformity, CT number accuracy, noise power spectrum, spatial resolution, material decomposition and virtual monoenergetic imaging (VMI) performance. Four patients were scanned on the PCD-CT system with matched or lower radiation dose than their prior clinical CT scans performed using energy-integrating detector (EID) CT, and the potential clinical impact of PCD-CT was qualitatively evaluated. Phantom results showed water CT numbers within ±5 HU, and image uniformity measured between peripheral and central regions-of-interests to be within ±5 HU. For the UHR mode using a dedicated sharp kernel, the cut-off spatial frequency was 40 line-pairs cm −1 , which corresponds to a 125 μ m limiting in-plane spatial resolution. The full-width-at-half-maximum for the section sensitivity profile was 0.33 mm for the smallest slice thickness (0.2 mm) using the UHR mode. Material decomposition in a multi-energy CT phantom showed accurate material classification, with a root-mean-squared-error of 0.3 mg cc −1 for iodine concentrations (2–15 mg cc −1 ) and 14.2 mg cc −1 for hydroxyapatite concentrations (200 and 400 mg cc −1 ). The average percent error for CT numbers corresponding to the iodine concentrations in VMI (40–70 keV) was 2.75%. Patient PCD-CT images demonstrated better delineation of anatomy for chest and temporal bone exams performed with the UHR mode, which allowed the use of very sharp kernels not possible with EID-CT. VMI and virtual non-contrast images generated from a patient head CT angiography exam using the standard acquisition mode demonstrated the multi-energy capability of the PCD-CT system.
Energy‐integrating‐detector multi‐energy CT: Implementation and a phantom study
Ren, Liqiang , Allmendinger, Thomas , Halaweish, Ahmed F., Schmidt, Bernhard , Flohr, Thomas , Yu, Lifeng , McCollough, Cynthia H. , Yu, Lifeng

Medical Physics | May 14, 2021 | Volume: 48 | Issue: 9 | Pages: 4857-4871

10.1002/mp.14943 Get It

PurposeMulti‐energy computed tomography (MECT) has a great potential to enable many novel clinical applications such as simultaneous multi‐contrast imaging. The purpose of this study was to implement triple‐beam MECT on a traditional energy‐integrating‐detector (EID) CT platform (EID‐MECT).MethodsThis was accomplished by mounting a z‐axis split‐filter (0.05 mm Au, 0.6 mm Sn) on Tube A of a dual‐source EID CT scanner. With the two split x‐ray beams from Tube A and the third beam from Tube B, three beams with different x‐ray spectra can be simultaneously acquired. With Tube B operated at 70 or 80 kV and Tube A at 120 or 140 kV, four different triple‐beam configurations were calibrated for MECT measurements: 70/Au120/Sn120, 80/Au120/Sn120, 70/Au140/Sn140, and 80/Au140/Sn140 kV. Iodine (I), gadolinium (Gd), bismuth (Bi) samples, and their mixtures were prepared for 2 three‐material‐decomposition tasks and 1 four‐material‐decomposition task. For each task, samples were placed in a water phantom and scanned using each of the four triple‐beam configurations. For comparison, the same phantom was also scanned using three other dual‐energy CT (DECT) or MECT technologies: twin‐beam DECT (TB‐DECT), dual‐source DECT (DS‐DECT), and photon‐counting‐detector CT (PCD‐CT), all with optimal x‐ray spectrum settings and at equal volume CT dose index (CTDIvol). The phantom for four‐material decomposition (I/Gd/Bi/Water imaging) was scanned using the PCD‐CT only (140 kV with 25, 50, 75, and 90 keV). Image‐based material decomposition was performed to acquire material‐specific images, on which the mean basis material concentrations and noise levels were measured and compared across all triple‐beam configurations in EID‐MECT and various DECT/MECT systems.ResultsThe optimal triple‐beam configuration was task‐dependent with 70/Au120/Sn120, 70/Au140/Sn140, and 70/Au120/Sn120 kV for I/Gd/Water, I/Bi/Water, and I/Gd/Bi/Water material decomposition tasks, respectively. At equal radiation dose level, EID‐MECT provided comparable or better quantification accuracy in material‐specific images for all three material decomposition tasks, compared to EID‐based DECT and PCD‐CT systems. In terms of noise level comparison, EID‐MECT‐derived material‐specific images showed lower noise levels than TB‐DECT and DS‐DECT, but slightly higher than that from PCD‐CT in I/Gd/Water imaging. For I/Bi/Water imaging, EID‐MECT showed a comparable noise level to DS‐DECT, and a much lower noise level than TB‐DECT and PCD‐CT in all material‐specific images. For the four‐material decomposition task involving I/Gd/Bi/Water, the bismuth‐specific image derived from EID‐MECT was slightly noisier, but both iodine‐ and gadolinium‐specific images showed much lower noise levels in comparison to PCD‐CT.ConclusionsFor the first time, an EID‐based MECT system that can simultaneously acquire three x‐ray spectra measurements was implemented on a clinical scanner, which demonstrated comparable or better imaging performance than existing DECT and MECT systems.
Deep-learning-based direct synthesis of low-energy virtual monoenergetic images with multi-energy CT
Gong, Hao , Marsh, Jeffrey F., DSouza, Karen N. , Huber, Nathan R. , D'Souza, Karen N , Rajendran, Kishore , McCollough, Cynthia H , Leng, Shuai , Rajendran, Kishore , Fletcher, Joel G. , McCollough, Cynthia H. , Leng, Shuai

Journal of Medical Imaging | April 19, 2021 | Volume: 8 | Issue: 05 | Pages: No page available

10.1117/1.jmi.8.5.052104 Get It

Basal Ganglia Calcification Is Associated With Local and Systemic Metabolic Mechanisms in Adult Hypoparathyroidism
Zavatta, Guido , Tebben, Peter J. , McCollough, Cynthia H. , Yu, Lifeng , Vrieze, Thomas J., Clarke, B.L. , Vrieze, Thomas, Clarke, Bart L , McCollough, Cynthia H , Tebben, Peter , Yu, Lifeng

The Journal of Clinical Endocrinology & Metabolism | March 31, 2021 | Volume: 106 | Issue: 7 | Pages: 1900-1917

10.1210/clinem/dgab162 Get It

Abstract Context Hypoparathyroidism is characterized by low serum calcium, increased serum phosphorus, and inappropriately low or decreased serum parathyroid hormone, which may be associated with soft tissue calcification in the basal ganglia of the brain. Objective To assess the prevalence and factors involved in the pathophysiology of basal ganglia calcification (BGC) in the brain in chronic hypoparathyroidism and to evaluate proposed pathophysiologic mechanisms. Design Case-control study with retrospective review of medical records over 20 years. Setting Single academic medical center. Patients 142 patients with chronic hypoparathyroidism and computed tomography (CT) head scans followed between January 1, 2000 and July 9, 2020, and 426 age- and sex-matched controls with CT head scans over the same interval. Interventions None. Main Outcome Measures Demographic, biochemical, and CT head imaging findings, with semiquantitative assessment of volumetric BGC. Results The study found that 25.4% of 142 patients followed for a median of 17 years after diagnosis of chronic hypoparathyroidism had BGC, which developed at a younger age than in controls. BGC was 5.1-fold more common in nonsurgical patients and less common in postsurgical patients. Low serum calcium and low calcium/phosphate ratio correlated with BGC. Neither serum phosphorus nor calcium × phosphate product predicted BGC. Lower serum calcium was associated with greater volume of BGC. The extent of BGC varied widely, with nonsurgical patients generally having a greater volume and distribution of calcification. Conclusions BGC is associated with low serum calcium and low serum calcium/phosphate ratio, which may be related to severity of the disease, its etiology, or duration of treatment.
The feasibility of low iodine dynamic CT angiography with test bolus for evaluation of lower extremity peripheral artery disease
Inoue, Akitoshi , Vrtiska, Terri J., Lee, Yong S. , Vasconcelos, Rogerio N., Weber, Nikkole M. , Halaweish, Ahmed F., Duba, Irene , Williamson, Eric E. , Fletcher, Joel G , Inoue, Akitoshi , Leng, Shuai , McCollough, Cynthia H. , Fletcher, Joel G.

Vascular | January 18, 2021 | Volume: 29 | Issue: 6 | Pages: 927-937

10.1177/1708538120986304 Get It

Objective This study aims to determine if low iodine dynamic computed tomography angiography performed after a fixed delay or test bolus acquisition demonstrates high concordance with clinical computed tomography angiography (using a routine amount of iodinated contrast) to display lower extremity peripheral arterial disease. Methods After informed consent, low iodine dynamic computed tomography angiography examination (using either a fixed delay or test bolus) using 50 ml of iodine contrast media was performed. A subsequent clinical computed tomography angiography using standard iodine dose (115 or 145 ml) served as the reference standard. A vascular radiologist reviewed dynamic and clinical computed tomography angiography images to categorize the lumen into “not opacified”, “<50% stenosis”, “ 50 ̶70% stenosis”, “>70% stenosis”, and “occluded” for seven arterial segments in each lower extremity. Concordance between low iodine dynamic computed tomography angiography and the routine iodine reference standard was calculated. The clinical utility of 4D volume-rendered images was also evaluated. Results Sixty-eight patients (average age 66.1 ± 12.3 years, male; female = 49: 19) were enrolled, with 34 patients each undergoing low iodine dynamic computed tomography angiography using fixed delay and test bolus techniques, respectively. One patient assigned to the test bolus group did not undergo low iodine computed tomography angiography due to unavailable delayed time. The fixed delay was 13 s, with test bolus acquisition resulting in a mean variable delay prior to image acquisition of 19.5 s (range; 8–32 s). Run-off to the ankle was observed using low iodine dynamic computed tomography angiography following fixed delay and test bolus acquisition in 76.4% (26/34) and 100% (33/33) of patients, respectively ( p = 0.005). Considering extremities with run-off to the ankle and without severe artifact, the concordance rate between low iodine dynamic computed tomography angiography and the routine iodine reference standard was 86.8% (310/357) using fixed delay and 97.9% (425/434) using test bolus ( p < 0.001). 4D volume-rendered images using fixed delay and test bolus demonstrated asymmetric flow in 57.7% (15/26) and 58.1% (18/31) ( p = 0.978) of patients, and collateral blood flow in 11.5% (3/26) and 22.6% (7/31) of patients ( p = 0.319), respectively. Conclusion Low iodine dynamic computed tomography angiography with test bolus acquisition has a high concordance with routine peripheral computed tomography angiography performed with standard iodine dose, resulting in improved run-off to the ankle compared to dynamic computed tomography angiography performed after a fixed delay. This method is useful for minimizing iodine dose in patients at risk for contrast-induced nephropathy. 4D volume-rendered computed tomography angiography images provide useful dynamic information.