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920 citation(s) found for "Xu, Cheng".

Pleiotropic effects of genetic risk variants for other cancers on colorectal cancer risk: PAGE, GECCO and CCFR consortia
Kocarnik, Jonathan , Lindor, Noralane M. , Chang‐Claude, Jenny , Caberto, Christian, Love, Shelly-Ann, Slattery, Martha L. , Hindorff, Lucia A. , Park, Sungshim Lani, Schumacher, Fredrick R. , Hoffmeister, Michael , Duggan, David , Hou, Lifang , Carlson, Chris , Carty, Cara L. , Mann, Sue, Giovannucci, Edward L. , Fuchs, Charles S. , Jenkins, Mark A. , Haile, Robert W. , Conti, David V. , Potter, John D. , Caan, Bette J. , Hayes, Richard B. , Berndt, Sonja I. , Küry, Sébastien , Bezieau, Stéphane , Ambite, José Luis , Kumaraguruparan, Gowri, Richardson, Danielle , Goodloe, Robert, Dilks, Holli H., Baker, Paxton, Zanke, Brent W., Lemire, Mathieu , Gallinger, Steven , Jiao, Shuo , Harrison, Tabitha A. , Seminara, Daniela, Haiman, Christopher A. , Hutter, Carolyn M., Crawford, Dana C. , Heiss, Gerardo , Brenner, Hermann , Bush, William S. , Casey, Graham , Peters, Ulrike , Cheng, Iona C. , Dumitrescu, Logan , Avery, Christy L. , Chan, Andrew T. , Baron, John A. , Kraft, Peter , Butler, Anne Marie E. , Monroe, Kristine R. , Lin, Yi , Ma, Jing , Newcomb, Polly A. , Hopper, John L. , Campbell, Peter T. , Schoen, Robert E. , Chanock, Stephen Jacob , Hsu, Li , Kooperberg, Charles , Wilkens, Lynne R. , White, Emily E. , Hudson, Thomas J , Marchand, Loı̈c Le , Hoffmeister, Michael , Jenkins, Mark A , Haile, Robert W , Harrison, Tabitha A , Potter, John D , Kury, Sebastien , Brenner, Hermann , Hayes, Richard B , Bézieau, Stéphane , Conti, David V , Hou, Lifang , Caan, Bette J , Bush, William S

Gut | August 10, 2013 | Volume: 63 | Issue: 5 | Pages: 800-807

10.1136/gutjnl-2013-305189 | PMID 23935004 Get It

Objective Genome-wide association studies have identified a large number of single nucleotide polymorphisms (SNPs) associated with a wide array of cancer sites. Several of these variants demonstrate associations with multiple cancers, suggesting pleiotropic effects and shared biological mechanisms across some cancers. We hypothesised that SNPs previously associated with other cancers may additionally be associated with colorectal cancer. In a large-scale study, we examined 171 SNPs previously associated with 18 different cancers for their associations with colorectal cancer. Design We examined 13 338 colorectal cancer cases and 40 967 controls from three consortia: Population Architecture using Genomics and Epidemiology (PAGE), Genetic Epidemiology of Colorectal Cancer (GECCO), and the Colon Cancer Family Registry (CCFR). Study-specific logistic regression results, adjusted for age, sex, principal components of genetic ancestry, and/or study specific factors (as relevant) were combined using fixed-effect meta-analyses to evaluate the association between each SNP and colorectal cancer risk. A Bonferroni-corrected p value of 2.92×10 −4 was used to determine statistical significance of the associations. Results Two correlated SNPs—rs10090154 and rs4242382—in Region 1 of chromosome 8q24, a prostate cancer susceptibility region, demonstrated statistically significant associations with colorectal cancer risk. The most significant association was observed with rs4242382 (meta-analysis OR=1.12; 95% CI 1.07 to 1.18; p=1.74×10 −5 ), which also demonstrated similar associations across racial/ethnic populations and anatomical sub-sites. Conclusions This is the first study to clearly demonstrate Region 1 of chromosome 8q24 as a susceptibility locus for colorectal cancer; thus, adding colorectal cancer to the list of cancer sites linked to this particular multicancer risk region at 8q24.
Can pillar suturing promote efficacy of adenotonsillectomy for pediatric osas? A prospective randomized controlled trial
Chiu, Po‐Han, Ramar, Kannan , Chen, Kuang‐Chao, Tsai, Yih‐Jeng , Lin, Chia‐Mo, Chiang, Yuh‐Chyun, Lu, Chia‐Ying, Chiang, Rayleigh Ping‐Ying , Chiu, Po-Han

The Laryngoscope | August 5, 2013 | Volume: 123 | Issue: 10 | Pages: 2573-2577

10.1002/lary.24011 | PMID 23918531 Get It

Objectives/Hypothesis Pediatric obstructive sleep apnea syndrome ( OSAS ) is a common disorder with serious clinical implications if left untreated. The recommended initial treatment for pediatric patients with obstructive sleep apnea syndrome ( OSAS ) is adenotonsillectomy. However, recent reports have shown variable surgical results with adenotonsillectomy in the treatment of pediatric OSAS . Study Design Prospective, controlled study. Methods From April 2007 to August 2010, 24 participants were assigned alternatively to either adenotonsillectomy with pillar suturing (intervention group) or adenotonsillectomy alone (control group). Result The average improvement in apnea hypopnea index ( AHI ) was 42.6% in the control group and 79.9% in the intervention group ( P =0.037). The success rate was 50% in the control group and 91.6% in the intervention group ( P =0.034). Six patients (50%) in the intervention group achieved complete resolution of pediatric OSAS , as defined by an AHI <1/hour, compared to 2 patients (16.7%) in the control group ( P =0.097). Conclusion Adenotonsillectomy with pillar suturing showed significant improvement in treating pediatric patients with OSAS compared to adenotonsillectomy alone. The procedure is simple and safe. Level of Evidence 4. Laryngoscope , 123:2574–2578, 2013
Complex between α-bungarotoxin and an α7 nicotinic receptor ligand-binding domain chimaera
Huang, Sun , Li, Shu-Xing, Bren, Nina, Cheng, Kevin J. , Gomoto, Ryan, Chen, Lin , Sine, Steven M.

Biochemical Journal | June 27, 2013 | Volume: 454 | Issue: 2 | Pages: 303-310

10.1042/bj20130636 | PMID 23800261 Get It

To identify high-affinity interactions between long-chain α-neurotoxins and nicotinic receptors, we determined the crystal structure of the complex between α-btx (α-bungarotoxin) and a pentameric ligand-binding domain constructed from the human α7 AChR (acetylcholine receptor) and AChBP (acetylcholine-binding protein). The complex buries ~2000 Å2 (1 Å=0.1 nm) of surface area, within which Arg36 and Phe32 from finger II of α-btx form a π-cation stack that aligns edge-to-face with the conserved Tyr184 from loop-C of α7, while Asp30 of α-btx forms a hydrogen bond with the hydroxy group of Tyr184. These inter-residue interactions diverge from those in a 4.2 Å structure of α-ctx (α-cobratoxin) bound to AChBP, but are similar to those in a 1.94 Å structure of α-btx bound to the monomeric α1 extracellular domain, although compared with the monomer-bound complex, the α-btx backbone exhibits a large shift relative to the protein surface. Mutational analyses show that replacing Tyr184 with a threonine residue abolishes high-affinity α-btx binding, whereas replacing with a phenylalanine residue maintains high affinity. Comparison of the α-btx complex with that coupled to the agonist epibatidine reveals structural rearrangements within the binding pocket and throughout each subunit. The overall findings highlight structural principles by which α-neurotoxins interact with nicotinic receptors.
Numerical metrics for automated quantification of interstitial cell of Cajal network structural properties
Du, Peng , O’Grady, Greg, Archer, Rosalind , Farrugia, Gianrico , Gibbons, Simon J. , Cheng, Leo K. , Gao, Jerry Zeyu , Gibbons, S J

Journal of The Royal Society Interface | June 26, 2013 | Volume: 10 | Issue: 86 | Pages: 20130421

10.1098/rsif.2013.0421 | PMID 23804441 Get It

Depletion of interstitial cells of Cajal (ICC) networks is known to occur in several gastrointestinal motility disorders. Although confocal microscopy can effectively image and visualize the spatial distribution of ICC networks, current descriptors of ICC depletion are limited to cell numbers and volume computations. Spatial changes in ICC network structural properties have not been quantified. Given that ICC generate electrical signals, the organization of a network may also affect physiology. In this study, six numerical metrics were formulated to automatically determine complex ICC network structural properties from confocal images: density , thickness , hole size , contact ratio , connectivity and anisotropy . These metrics were validated and applied in proof-of-concept studies to quantitatively determine jejunal ICC network changes in mouse models with decreased ( 5-HT 2 B receptor knockout (KO)) and normal ( Ano1 KO) ICC numbers, and during post-natal network maturation. Results revealed a novel remodelling phenomenon occurring during ICC depletion, namely a spatial rearrangement of ICC and the preferential longitudinal alignment. In the post-natal networks, an apparent pruning of the ICC network was demonstrated. The metrics developed here enabled the first detailed quantitative analyses of structural changes that may occur in ICC networks during depletion and development.
Computer Aided Quantification of Pathological Features for Flexor Tendon Pulleys on Microscopic Images
Liu, Yung-Chun , Chen, Hsin-Chen, Shih, Hui-Hsuan, Yang, Tai‐Hua , Yang, Hsiao‐Bai, Yang, Dee-Shan, Su, Fong‐Chin , Sun, Yung‐Nien , Yang, Hsiao‐Bai, Yang, Dee-Shan

Computational and Mathematical Methods in Medicine | June 6, 2013 | Volume: 2013 | Issue: No issue available | Pages: 1-9

10.1155/2013/914124 | PMID 23840282 Get It

Quantifying the pathological features of flexor tendon pulleys is essential for grading the trigger finger since it provides clinicians with objective evidence derived from microscopic images. Although manual grading is time consuming and dependent on the observer experience, there is a lack of image processing methods for automatically extracting pulley pathological features. In this paper, we design and develop a color-based image segmentation system to extract the color and shape features from pulley microscopic images. Two parameters which are the size ratio of abnormal tissue regions and the number ratio of abnormal nuclei are estimated as the pathological progression indices. The automatic quantification results show clear discrimination among different levels of diseased pulley specimens which are prone to misjudgments for human visual inspection. The proposed system provides a reliable and automatic way to obtain pathological parameters instead of manual evaluation which is with intra- and interoperator variability. Experiments with 290 microscopic images from 29 pulley specimens show good correspondence with pathologist expectations. Hence, the proposed system has great potential for assisting clinical experts in routine histopathological examinations.
Genome-Wide Association Study of Genetic Predictors of Overall Survival for Non–Small Cell Lung Cancer in Never Smokers
Wu, Xifeng , Ye, Yuanqing , Aakre, Jeremiah A. , Chang, Gee-Chen , Yang, Pan‐Chyr , Roth, Jack A. , Marks, Randolph S., Lippman, Scott M. , Deschamps, Claude, Su, Wu‐Chou , Wang, Wen‐Chang , Huang, Ming‐Shyan , Chang, David W. , Hong, Waun Ki , Hsiung, Chao A. , Wang, Liang , Pu, Xia , Chang, Joe Y. , Lu, Charles , Li, Yan , Pankratz, V. Shane , Minna, John Dorrance , Hildebrandt, Michelle A.T. , Yang, Ping

Cancer Research | May 24, 2013 | Volume: 73 | Issue: 13 | Pages: 4028-4038

10.1158/0008-5472.can-12-4033 | PMID 23704207 Get It

Abstract To identify the genetic factors that influence overall survival in never smokers who have non–small cell lung carcinoma (NSCLC), we conducted a consistency meta-analysis study using genome-wide association approaches for overall survival in 327 never smoker patients with NSCLC from The University of Texas MD Anderson Cancer Center (Houston, TX) and 293 cases from the Mayo Clinic (Rochester, MN). We then conducted a two-pronged validation of the top 25 variants that included additional validation in 1,256 patients with NSCLC from Taiwan and assessment of expression quantitative trait loci (eQTL) and differential expression of genes surrounding the top loci in 70 tumors and matched normal tissues. A total of 94 loci were significant for overall survival in both MD Anderson and Mayo studies in the consistency meta-analysis phase, with the top 25 variants reaching a P value of 10−6. Two variants of these 25 were also significant in the Taiwanese population: rs6901416 [HR, 1.44; 95% confidence interval (CI), 1.01–2.06] and rs10766739 (HR, 1.23; 95%CI, 1.00–1.51). These loci resulted in a reduction of median survival time of at least eight and five months in three populations, respectively. An additional six variants (rs4237904, rs7976914, rs4970833, rs954785, rs485411, and rs10906104) were validated through eQTL analysis that identified significant correlations with expression levels of six genes (LEMD3, TMBIM, ATXN7L2, SHE, ITIH2, and NUDT5, respectively) in normal lung tissue. These genes were also significantly differentially expressed between the tumor and normal lung tissue. These findings identify several novel, candidate prognostic markers for NSCLC in never smokers, with eQTL analysis suggesting a potential biologic mechanism for a subset of these observed associations. Cancer Res; 73(13); 4028–38. ©2013 AACR.
Safety of Sports for Athletes With Implantable Cardioverter-Defibrillators
Lampert, Rachel , Olshansky, Brian , Heidbüchel, Hein , Lawless, Christine E., Saarel, Elizabeth V. , Ackerman, Michael J. , Calkins, Hugh , Maron, Barry J. , Scheinman, Melvin M. , Wilkoff, Bruce L. , Zipes, Douglas P. , Berul, Charles I. , Cheng, Alan , Law, Ian H. , Loomis, Michele, Barth, Cheryl , Dziura, James , Cannom, David S. , Estes, N.A. Mark , Link, Mark S. , Marcus, Gregory M. , Brandt, Cynthia , Li, Fangyong , Olshansky, Brian , Law, Ian H , Zipes, Douglas P

Circulation | May 20, 2013 | Volume: 127 | Issue: 20 | Pages: 2021-2030

10.1161/circulationaha.112.000447 | PMID 23690453 Get It

Background— The risks of sports participation for implantable cardioverter-defibrillator (ICD) patients are unknown. Methods and Results— Athletes with ICDs (age, 10–60 years) participating in organized (n=328) or high-risk (n=44) sports were recruited. Sports-related and clinical data were obtained by phone interview and medical records. Follow-up occurred every 6 months. ICD shock data and clinical outcomes were adjudicated by 2 electrophysiologists. Median age was 33 years (89 subjects <20 years of age); 33% were female. Sixty were competitive athletes (varsity/junior varsity/traveling team). A pre-ICD history of ventricular arrhythmia was present in 42%. Running, basketball, and soccer were the most common sports. Over a median 31-month (interquartile range, 21–46 months) follow-up, there were no occurrences of either primary end point—death or resuscitated arrest or arrhythmia- or shock-related injury—during sports. There were 49 shocks in 37 participants (10% of study population) during competition/practice, 39 shocks in 29 participants (8%) during other physical activity, and 33 shocks in 24 participants (6%) at rest. In 8 ventricular arrhythmia episodes (device defined), multiple shocks were received: 1 at rest, 4 during competition/practice, and 3 during other physical activity. Ultimately, the ICD terminated all episodes. Freedom from lead malfunction was 97% at 5 years (from implantation) and 90% at 10 years. Conclusions— Many athletes with ICDs can engage in vigorous and competitive sports without physical injury or failure to terminate the arrhythmia despite the occurrence of both inappropriate and appropriate shocks. These data provide a basis for more informed physician and patient decision making in terms of sports participation for athletes with ICDs.
D(T)PACE as salvage therapy for aggressive or refractory multiple myeloma
Kukreti, Vishal , Panzarella, Tony , Reece, Donna , Stewart, Keith, Trieu, Young, Trudel, Suzanne , Chen, Christine I. , Gerrie, Alina S. , Mıkhael, Joseph , Cheng, Lu , Jiang, Haiyan

British Journal of Haematology | April 18, 2013 | Volume: 161 | Issue: 6 | Pages: 802-810

10.1111/bjh.12325 | PMID 23594335 Get It

SummaryDexamethasone ± thalidomide with infusion of cisplatin, doxorubicin, cyclophosphamide, and etoposide [D(T)PACE] is generally reserved as salvage therapy for aggressive multiple myeloma (MM) or plasma cell leukaemia (PCL) resistant to conventional therapies. The efficacy and durability of this potentially toxic regimen in this setting is unclear. We identified 75 patients who received D(T)PACE for relapsed/refractory MM at two tertiary care centres: Princess Margaret Hospital, Toronto and Mayo Clinic Arizona. At time of D(T)PACE, 16 patients had PCL and three patients had leptomeningeal disease. Patients were heavily pretreated (median three prior regimens, range 1–12; prior autologous stem cell transplant [ASCT] 33%). Overall response rate was 49% (very‐good partial response 16%, partial response 33%) with stable disease in an additional 36%. Median progression‐free survival (PFS) was 5·5 months (95% confidence interval [CI]:4·3–9·8); overall survival (OS) 14·0 months (95% CI:8·7–19·3). Thirty‐five patients proceeded to ASCT or clinical trial, with median PFS for this subset of 13·4 months (95% CI:7·7–20·1) and OS 20·5 months (95% CI:14·8–63·8). D(T)PACE is an effective salvage therapy for heavily pretreated MM patients. Although the overall response rate of 49% in this poor prognosis cohort is reasonable, the PFS is short, suggesting the best role for D(T)PACE is in bridging to definitive therapy, such as transplantation.
The International Criteria for Behçet's Disease (ICBD): a collaborative study of 27 countries on the sensitivity and specificity of the new criteria
(ITR‐ICBD), International Team for the Revision of the International Criteria for Behçet's Disease, Davatchi, Fereydoun , Assaad‐Khalil, Samir H. , Calamia, Kenneth , Sadeghi‐Abdollahi, Bahar, Schirmer, Michael , Tzellos, Thrasyvoulos , Zouboulis, Christos C. , Akhlagi, Massoomeh, Aldalaan, Abdullah M. , Alekberova, Z S , Altenburg, Andreas, Arromdee, Emvalee, Baltaci, M. , Benamour, S., Ghorbel, I. Ben, Boyvat, Ayşe , Carvalho, Luísa , Chen, W., Ben‐Chetrit, Eldad , Chams‐Davatchi, C., Correia, João , Crespo, Jorge , Dong, Yanqing , Paixão‐Duarte, F., Elmuntaser, K., Elonakov, A. V., Gil, Juca , Hayani, R.M., Houman, H., Isayeva, Ayat R., Jamshidi, Ahmadreza , Kaklamanis, P., Kumar, Anjali S. , Kyrgidis, Αthanassios , Madanat, W. , Nadji, Abdolhadi, Namba, Kenichi , Ohno, Shigeaki , Olivieri, Ilaria , Patto, José Vaz , Pipitone, Nicolò , Queiroz, Marisa Vieira de , Ramos, F., Resende, Carlos Xavier , Rosa, C. M., Salvarani, Carlo , Serra, Mauricio, Shahram, Farhad , Shams, H, Sharquie, Khalifa E. , Sliti‐Khanfir, M., Abreu, T. Tribolet de, Vasconcelos, Carlos , Vedes, Joana, Wechsler, B., Cheng, Y.K., Zhang, Z. , Ziaei, Naghmeh, (ITR‐ICBD), International Team for the Revision of the International Criteria for Behçet's Disease, Crook, Julia E. , Ali, Asad Abu Bakar , Bastos, Marcus Gomes , Dias, Cláudia Camila , Haghdoost, Ali Akbar , Ramos, F., Salvarani, Carlo , Abreu, T. Tribolet de, Cheng, Y.K., Kyrgidis, Athanassios , Zouboulis, Christos C

Journal of the European Academy of Dermatology and Venereology | February 26, 2013 | Volume: 28 | Issue: 3 | Pages: 338-347

10.1111/jdv.12107 | PMID 23441863 Get It

Abstract Objective Behçet's disease ( BD ) is a chronic, relapsing, inflammatory vascular disease with no pathognomonic test. Low sensitivity of the currently applied International Study Group ( ISG ) clinical diagnostic criteria led to their reassessment. Methods An International Team for the Revision of the International Criteria for BD (from 27 countries) submitted data from 2556 clinically diagnosed BD patients and 1163 controls with BD ‐mimicking diseases or presenting at least one major BD sign. These were randomly divided into training and validation sets. Logistic regression, ‘leave‐one‐country‐out’ cross‐validation and clinical judgement were employed to develop new International Criteria for BD ( ICBD ) with the training data. Existing and new criteria were tested for their performance in the validation set. Results For the ICBD , ocular lesions, oral aphthosis and genital aphthosis are each assigned 2 points, while skin lesions, central nervous system involvement and vascular manifestations 1 point each. The pathergy test, when used, was assigned 1 point. A patient scoring ≥4 points is classified as having BD . In the training set, 93.9% sensitivity and 92.1% specificity were assessed compared with 81.2% sensitivity and 95.9% specificity for the ISG criteria. In the validation set, ICBD demonstrated an unbiased estimate of sensitivity of 94.8% (95% CI : 93.4–95.9%), considerably higher than that of the ISG criteria (85.0%). Specificity (90.5%, 95% CI : 87.9–92.8%) was lower than that of the ISG ‐criteria (96.0%), yet still reasonably high. For countries with at least 90%‐of‐cases and controls having a pathergy test, adding 1 point for pathergy test increased the estimate of sensitivity from 95.5% to 98.5%, while barely reducing specificity from 92.1% to 91.6%. Conclusion The new proposed criteria derived from multinational data exhibits much improved sensitivity over the ISG criteria while maintaining reasonable specificity. It is proposed that the ICBD criteria to be adopted both as a guide for diagnosis and classification of BD .
Inhibition of p38 MAPK attenuates renal atrophy and fibrosis in a murine renal artery stenosis model
Wang, Diping, Warner, Gina M., Butters, Kim A., Lien, Karen, Gray, Catherine , Garovic, Vesna D. , Lerman, Lilach O. , Textor, Stephen C., Nath, Karl A. , Simari, Robert D., Grande, Joseph P. , Yin, Ping , Knudsen, Bruce E. , Cheng, Jingfei , Garovic, Vesna D

American Journal of Physiology-Renal Physiology | January 31, 2013 | Volume: 304 | Issue: 7 | Pages: F938-F947

10.1152/ajprenal.00706.2012 | PMID 23364805 Get It

Renal artery stenosis (RAS) is an important cause of chronic renal dysfunction. Recent studies have underscored a critical role for CCL2 (MCP-1)-mediated inflammation in the progression of chronic renal damage in RAS and other chronic renal diseases. In vitro studies have implicated p38 MAPK as a critical intermediate for the production of CCL2. However, a potential role of p38 signaling in the development and progression of chronic renal disease in RAS has not been previously defined. We sought to test the hypothesis that inhibition of p38 MAPK ameliorates chronic renal injury in mice with RAS. We established a murine RAS model by placing a cuff on the right renal artery and treated mice with the p38 inhibitor SB203580 or vehicle for 2 wk. In mice treated with vehicle, the cuffed kidney developed interstitial fibrosis, tubular atrophy, and interstitial inflammation. In mice treated with SB203580, the RAS-induced renal atrophy was reduced (70% vs. 39%, P < 0.05). SB203580 also reduced interstitial inflammation and extracellular matrix deposition but had no effect on the development of hypertension. SB203580 partially blocked the induction of CCL2, CCL7 (MCP-3), CC chemokine receptor 2 (CCR2), and collagen 4 mRNA expression in the cuffed kidneys. In vitro, blockade of p38 hindered both TNF-α and TGF-β-induced CCL2 upregulation. Based on these observations, we conclude that p38 MAPK plays a critical role in the induction of CCL2/CCL7/CCR2 system and the development of interstitial inflammation in RAS.