Citations

Mayo Clinic

Clear

1992 citation(s) found for "Vu, Joshua".

Validating drug repurposing signals using electronic health records: a case study of metformin associated with reduced cancer mortality
Xu, Hua , Aldrich, Melinda C. , Peterson, Neeraja B. , Levy, Mia , Shah, Anushi, Han, Xue, Ruan, Xiaoyang , Jiang, Min , Li, Ying , Julien, Jamii St., Friedman, Carol, Roden, Dan M. , Denny, Joshua C. , Chen, Qingxia , Liu, Hongfang , Dai, Qi , Han, Xue, Warner, Jeremy L. , Roden, Dan M. , Denny, Joshua C

Journal of the American Medical Informatics Association | July 23, 2014 | Volume: 22 | Issue: 1 | Pages: 179-191

10.1136/amiajnl-2014-002649 | PMID 25053577 Get It

Abstract Objectives Drug repurposing, which finds new indications for existing drugs, has received great attention recently. The goal of our work is to assess the feasibility of using electronic health records (EHRs) and automated informatics methods to efficiently validate a recent drug repurposing association of metformin with reduced cancer mortality. Methods By linking two large EHRs from Vanderbilt University Medical Center and Mayo Clinic to their tumor registries, we constructed a cohort including 32 415 adults with a cancer diagnosis at Vanderbilt and 79 258 cancer patients at Mayo from 1995 to 2010. Using automated informatics methods, we further identified type 2 diabetes patients within the cancer cohort and determined their drug exposure information, as well as other covariates such as smoking status. We then estimated HRs for all-cause mortality and their associated 95% CIs using stratified Cox proportional hazard models. HRs were estimated according to metformin exposure, adjusted for age at diagnosis, sex, race, body mass index, tobacco use, insulin use, cancer type, and non-cancer Charlson comorbidity index. Results Among all Vanderbilt cancer patients, metformin was associated with a 22% decrease in overall mortality compared to other oral hypoglycemic medications (HR 0.78; 95% CI 0.69 to 0.88) and with a 39% decrease compared to type 2 diabetes patients on insulin only (HR 0.61; 95% CI 0.50 to 0.73). Diabetic patients on metformin also had a 23% improved survival compared with non-diabetic patients (HR 0.77; 95% CI 0.71 to 0.85). These associations were replicated using the Mayo Clinic EHR data. Many site-specific cancers including breast, colorectal, lung, and prostate demonstrated reduced mortality with metformin use in at least one EHR. Conclusions EHR data suggested that the use of metformin was associated with decreased mortality after a cancer diagnosis compared with diabetic and non-diabetic cancer patients not on metformin, indicating its potential as a chemotherapeutic regimen. This study serves as a model for robust and inexpensive validation studies for drug repurposing signals using EHR data.
What Is the Gold Standard for Comprehensive Interinstitutional Communication of Perioperative Information for Thyroid Cancer Patients? A Comparison of Existing Electronic Health Records with the Current American Thyroid Association Recommendations
Reis, Laura L. Dos, Tuttle, R. Michael , Alon, Eran E. , Bergman, Donald A., Bernet, Victor , Brett, Elise M., Cobin, Rhoda H., Doherty, Gerard M. , Harris, Jeffrey , Klopper, Joshua , Lupo, Mark A. , Milas, Mira , Macháč, Josef, Orloff, Lisa A. , Randolph, Gregory W. , Ross, Douglas S. , Smallridge, Robert C., Terris, David J. , Mehra, Saral , Scherl, Sophie, Clain, Jason B. , Urken, Mark L. , Lee, Stephanie L. , Mechanick, Jeffrey I. , Randolph, Gregory William , Tufano, Ralph Patrick

Thyroid® | July 18, 2014 | Volume: 24 | Issue: 10 | Pages: 1466-1472

10.1089/thy.2014.0209 | PMID 25036190 Get It

Background: Appropriate management of well-differentiated thyroid cancer requires treating clinicians to have access to critical elements of the patient's presentation, surgical management, postoperative course, and pathologic assessment. Electronic health records (EHRs) provide an effective method for the storage and transmission of patient information, although most commercially available EHRs are not intended to be disease-specific. In addition, there are significant challenges for the sharing of relevant clinical information when providers involved in the care of a patient with thyroid cancer are not connected by a common EHR. In 2012, the American Thyroid Association (ATA) defined the critical elements for optimal interclinician communication in a position paper entitled, “The Essential Elements of Interdisciplinary Communication of Perioperative Information for Patients Undergoing Thyroid Cancer Surgery.” Summary: We present a field-by-field comparison of the ATA's essential elements as applied to three contemporary electronic reporting systems: the Thyroid Surgery e-Form from Memorial Sloan-Kettering Cancer Center (MSKCC), the Alberta WebSMR from the University of Calgary, and the Thyroid Cancer Care Collaborative (TCCC). The MSKCC e-form fulfills 21 of 32 intraoperative fields and includes an additional 14 fields not specifically mentioned in the ATA's report. The Alberta WebSMR fulfills 45 of 82 preoperative and intraoperative fields outlined by the ATA and includes 13 additional fields. The TCCC fulfills 117 of 120 fields outlined by the ATA and includes 23 additional fields. Conclusions: Effective management of thyroid cancer is a highly collaborative, multidisciplinary effort. The patient information that factors into clinical decisions about thyroid cancer is complex. For these reasons, EHRs are particularly favorable for the management of patients with thyroid cancer. The MSKCC Thyroid Surgery e-Form, the Alberta WebSMR, and the TCCC each meet all of the general recommendations for effective reporting of the specific domains that they cover in the management of thyroid cancer, as recommended by the ATA. However, the TCCC format is the most comprehensive. The TCCC is a new Web-based disease-specific database to enhance communication of patient information between clinicians in a Health Insurance Portability and Accountability Act (HIPAA)-compliant manner. We believe the easy-to-use TCCC format will enhance clinician communication while providing portability of thyroid cancer information for patients.
Dixon‐type and subtraction‐type contrast‐enhanced magnetic resonance angiography: A theoretical and experimental comparison of SNR and CNR
Stinson, Eric G. , Trzasko, Joshua D. , Weavers, Paul T., Riederer, Stephen J.

Magnetic Resonance in Medicine | July 17, 2014 | Volume: 74 | Issue: 1 | Pages: 81-92

10.1002/mrm.25374 | PMID 25043453 Get It

PurposeThe purpose of this work is to compare the behavior of the signal‐to‐noise ratio (SNR) and contrast‐to‐noise ratio (CNR) in contrast‐enhanced MR angiography with background suppression performed by either a Dixon‐type or subtraction‐type method.Theory and MethodsTheoretical expressions for the SNR and CNR for both background suppression techniques were derived. The theoretical Dixon:subtraction SNR and CNR ratios were compared to empirical ratios measured from phantom and in vivo studies for Dixon techniques utilizing one, two, and three echoes. Specifically, the SNR and CNR ratios were compared as the concentration of contrast material in the blood changed.ResultsEmpirical measurements of the SNR and CNR ratios compared favorably with the ratios predicted by theory. As the contrast concentration was reduced, the SNR advantage of the Dixon techniques increased asymptotically. In the ideal case, the SNR improvement over subtraction contrast‐enhanced MR angiography was at least twofold for one‐ and two‐echo Dixon techniques and at least a factor of for the three‐echo Dixon technique.ConclusionExpressions showing a contrast concentration‐dependent SNR and CNR improvement of at least a factor of two when Dixon‐type contrast‐enhanced MR angiography is used in place of subtraction‐type contrast‐enhanced MR angiography were derived and validated with phantom and in vivo experiments. Magn Reson Med 74:81–92, 2015. © 2014 Wiley Periodicals, Inc.
Response to Letters Regarding Article, “Stroke or Transient Ischemic Attack in Patients With Transvenous Pacemaker or Defibrillator and Echocardiographically Detected Patent Foramen Ovale”
Friedman, Paul A. , Noheria, Amit , Ackerman, Michael J. , Asirvatham, Samuel J. , Aakre, Christopher A. , Vaidya, Vaibhav R. , Bdeir, Sami, Slusser, Joshua P. , Hodge, David O. , DeSimone, Christopher V. , DeSimone, Daniel C. , Patel, Nikhil A. , Rabinstein, Alejandro A. , Asirvatham, Samuel J

Circulation | July 7, 2014 | Volume: 130 | Issue: 2 | Pages: No page available

10.1161/circulationaha.114.009351 | PMID 25001630 Get It

Histopathological findings in cutaneous small-vessel vasculitis associated with solid-organ malignancy
Podjasek, Joshua O., Wetter, David A. , Wieland, Carilyn N. , Camilleri, Michael , Lohse, Christine M.

British Journal of Dermatology | June 24, 2014 | Volume: 171 | Issue: 6 | Pages: 1397-1401

10.1111/bjd.13202 | PMID 24958433 Get It

scikit-image: image processing in Python
Schönberger, Johannes L., Nunez-Iglesias, Juan , Boulogne, François , Warner, Joshua , Yager, Neil , Gouillart, Emmanuelle , Warner, Joshua D, Walt, Stéfan van der , Yu, Tony

PeerJ | June 19, 2014 | Volume: 2 | Issue: No issue available | Pages: e453

10.7717/peerj.453 | PMID 25024921 Get It

Pooling Prospective Studies to Investigate the Etiology of Second Cancers
Black, Amanda , Gibson, Todd M. , Park, Yikyung , Weinstein, Stephanie J. , Andreotti, Gabriella , Purdue, Mark P. , Fraumeni, Joseph F., Hartge, Patricia, Tucker, Margaret A. , Hoover, Robert N. , Cerhan, James R. , Zeleniuch‐Jacquotte, Anne , Curtis, Rochelle E. , Elena, Joanne W. , González, Amy Berrington de , Morton, Lindsay M. , Shiels, Meredith S. , Robien, Kim , Albanes, Demetrius , Freeman, Laura E. Beane , Sampson, Joshua N. , Cerhan, James R , Morton, Lindsay M , Berrington de Gonzalez, Amy , Gibson, Todd , Zeleniuch-Jacquotte, Anne

Cancer Epidemiology, Biomarkers & Prevention | May 15, 2014 | Volume: 23 | Issue: 8 | Pages: 1598-1608

10.1158/1055-9965.epi-14-0191 | PMID 24832874 Get It

Abstract Background: With over 13 million cancer survivors in the United States today, second cancers are of rapidly growing importance. However, data on nontreatment risk factors for second cancers are sparse. We explored the feasibility of pooling data from cohort studies of cancer incidence to investigate second cancer etiology. Methods: We combined data from five prospective studies including more than 800,000 individuals. We compared study designs and populations; evaluated availability of and ability to harmonize risk factor data; compared incidence and survival for common first primary malignancies and incidence of second primary malignancies; and estimated sample size requirements. Results: Overall, 96,513 incident, first primary malignancies were diagnosed during 1985 to 2009. Incidence rates and survival following the first primary varied among the cohorts, but most of the heterogeneity could be explained by characteristics of the study populations (age, sex, smoking, and screening rates). A total of 7,890 second primary cancers (excluding original primary site) were identified, yielding sufficient statistical power (≥80%) for detecting modest associations with risk of all second cancers among survivors of common first primary malignancies (e.g., colorectal cancer); however, there were insufficient events for studying survivors of rarer cancers or identifying risk factors for specific second cancers. Conclusions: Pooling data from cohort studies to investigate nontreatment risk factors for second primary cancers seems feasible but there are important methodologic issues—some of which are barriers to specific research questions—that require special attention. Impact: Increased understanding of nontreatment risk factors for second cancers will provide valuable prevention and surveillance information. Cancer Epidemiol Biomarkers Prev; 23(8); 1598–608. ©2014 AACR.
Hepatic Uterus-Like Mass Misdiagnosed as Hepatic Abscess
Sopha, Sabrina C., Rosado, Flavia, Smith, J. Joshua , Merchant, Nipun B. , Shi, Chanjuan , Rosado, Flavia G N, Smith, J Joshua

International Journal of Surgical Pathology | May 14, 2014 | Volume: 23 | Issue: 2 | Pages: 134-139

10.1177/1066896914534465 | PMID 24827588 Get It

Background. Hepatic endometriosis/uterus-like mass is rare and may be overlooked during hepatic cyst workups. We report a case of uterus-like mass, misdiagnosed as hepatic abscess. Case Report: A 47-year-old woman developed abdominal pain and vomiting. Infectious colitis with hepatic abscess was diagnosed, and remained antibiotic-refractory. Fine-needle aspiration and core biopsies showed benign contents. The patient presented to our institution with symptoms and normal blood work. Laparoscopic excision demonstrated a 1.4-cm cyst composed of endometrial glands (estrogen receptor+ and progesterone receptor+) and stroma (CD10+) with smooth muscle actin (SMA+), arranged in an organoid fashion. The patient, status-post hysterectomy, had no history or symptoms of endometriosis. Conclusion. This rare case illustrates the merit of considering uterus-like mass/endometriosis in the differential diagnosis of antibiotic-refractory hepatic cysts. Cyst heterogeneity may confound needle biopsy. We report the first instance of a hepatic uterus-like mass, with a review of related entities, postulated histogenesis, and important clinical associations.
Bone Marrow Mononuclear Cell Therapy for Acute Myocardial Infarction
Simari, Robert D., Pepine, Carl J. , Henry, Timothy D. , Spoon, Daniel B., Yeh, ED, Hare, Joshua M. , Schulman, Ivonne Hernandez , Anderson, R. David , Lambert, Charles , Sayre, Shelly L., Taylor, Doris A. , Ebert, Ray F. , Moyé, Lemuel A., Traverse, Jay H. , Bolli, Roberto

Circulation Research | May 8, 2014 | Volume: 114 | Issue: 10 | Pages: 1564-1568

10.1161/circresaha.114.303720 | PMID 24812350 Get It

To understand the role of bone marrow mononuclear cells in the treatment of acute myocardial infarction, this overview offers a retrospective examination of strengths and limitations of 3 contemporaneous trials with attention to critical design features and provides an analysis of the combined data set and implications for future directions in cell therapy for acute myocardial infarction.