Citations

Mayo Clinic

Clear

708 citation(s) found for "Wu, Derek".

The Human Male Mammary Gland has Similar Epithelial Populations to Female but Distinct Composition and Transcriptional Properties
Ibañez-Rios, M. Iliana , Aalam, Syed Mohammed Musheer , Ritting, Megan L. , Jore, Ashlyn, Chaludia, Keyur, Emperumal, Chitra Priya , Jakub, James W, McLaughlin, Sarah A. , Degnim, Amy C, Boughey, Judy C. , Couch, Fergus J. , Sadanandam, Anguraj , Radisky, Derek, Knapp, David J.H.F., Degnim, Amy C. , Jakub, James W. , Boughey, JC , Couch, Fergus J. , Jakub, James W , Degnim, Amy C , Yadav, Siddhartha , Sadanandam, Anguraj , Sherman, Mark E , Radisky, Derek C , Knapp, David J H F , Kannan, Nagarajan , Musheer Aalam, Syed Mohammed , Yadav, Siddhartha , Sherman, Mark E. , Radisky, Derek C. , Knapp, David J. H. F. , Kannan, Nagarajan

No container title available | March 31, 2026 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.64898/2026.03.27.714915 | PMID 41959192 Get It

ABSTRACT The normal adult male breast has not been characterized at single-cell resolution, leaving the cellular basis of male breast cancer (MBC) biology undefined. Here we present an integrated single-cell RNA sequencing atlas of the adult human breast comprising 174,471 cells from 17 donors (3 male, 14 female), including 18,117 male-derived cells. This revealed that the male breast retains all three epithelial populations, basal (BC), luminal progenitor (LP), and luminal committed cells (LC), but with an increase in LC at the expense of BC and LP across all three male donors. Male LC were distinguished from female by elevated ESR1 and PGR mRNA, enrichment of RNA processing and ribosome biogenesis programs, reduced inflammatory cytokine and growth factor signaling, elevated estradiol gene set enrichment scores, and higher inferred activity of developmental patterning transcription factors. This pattern was observed across differential expression, gene ontology, ligand profiling, and regulon-based analyses, and was not restricted to sex chromosome-linked gene expression. This is consistent with the near-universal estrogen receptor (ER) positivity that characterizes MBC clinically. This atlas provides the first cellular and transcriptional reference for the normal male breast and a resource for investigating sex differences in mammary biology, germline susceptibility variant interpretation, and modeling breast malignancies.
Alternative Lead ECG Placements
Morales-Arteaga, José Luis , Meghdadi, Amin, Wu, Derek, Bhuiyan, Abdullah , Langleben, Nicole, Burak, Cengiz, Wilson, Emily, Pellerito, Ashley, Aristizábal, David, Razzaghi, Keanu, Gupta, Shyla, Baranchuk, Adrian, Farina, Juan M , Gupta, Shyla , Baranchuk, Adrian , Meghdadi, Amin , Wu, Derek, Burak, Cengiz, Razzaghi, Keanu, Farina, Juan M. , Baranchuk, Adrián

Annals of Noninvasive Electrocardiology | March 28, 2026 | Volume: 31 | Issue: 3 | Pages: No page available

10.1111/anec.70176 | PMID 41902528 Get It

ABSTRACT Electrocardiography (ECG) is a critical diagnostic tool for identifying cardiac conditions. While standard lead positions are widely used to ensure diagnostic accuracy, alternative lead placements have been developed to address specific clinical scenarios. These alternative configurations can overcome physical or technical challenges, enhance rhythm assessment, improve signal quality, and provide greater specificity for certain conditions, ultimately enabling more personalized diagnostic strategies. This paper examines the clinical significance of alternative ECG lead positions, highlighting their advantages, limitations, and potential applications in various clinical settings.
A guide to neuromodulation in drug‐resistant epilepsy
Parikh, Prachi, Dolezawa, Irena, Hegde, Manu , Imbach, L., Rao, Vikram R., Singh, Jaysingh , Watanabe, Satsuke, Frauscher, B., Frauscher, Birgit , Parikh, Prachi, Imbach, Lukas , Lundstrom, Brian N. , Pizzo, Francesca , Rao, Vikram R. , Southwell, Derek G. , Frauscher, Birgit

Epileptic Disorders | March 27, 2026 | Volume: 28 | Issue: 4 | Pages: 953-980

10.1002/epd2.70221 | PMID 41894177 Get It

Abstract Neuromodulation is approved for the treatment of drug‐resistant epilepsy. It has been increasingly utilized over the past two decades with the approval of deep brain stimulation (DBS) and responsive neurostimulation (RNS) in addition to vagus nerve stimulation (VNS)—particularly in patients who are not deemed to be good resective surgical candidates or in case of patient preference. In this seminar in epileptology article, we address learning objective 3.7 “Demonstrate knowledge of indications, limitations and risks for vagal nerve stimulation and other neuromodulation techniques” of the International League Against Epilepsy curriculum for epileptologists. We will review the indications for neuromodulation, device programming, surgical considerations for implantation, side effects, effects on sleep, and mood. This is complemented by case examples that provide perspective for trainees, along with an outlook on future directions for neuromodulation in epilepsy. This article aims to serve as a learning resource for trainees in neurology, clinical neurophysiology, and epileptology by providing guidance in how to navigate the landscape of neuromodulation in epilepsy.
Model-based evaluation of colorectal cancer screening effectiveness: three rounds of multitarget stool DNA testing versus one colonoscopy
Dore, Michael , Ebner, Derek W., Vahdat, Vahab, Estes, Chris, Ozbay, A. Burak, Foster, Victoria, Limburg, Paul J. , Ebner, Derek W. , Ozbay, A. Burak , Vahdat, Vahab , Doré, Michaël , Ebner, Derek , Vahdat, Vahab , Estes, Chris , Ozbay, A Burak , Limburg, Paul J , Estes, Chris

Journal of Medical Economics | March 25, 2026 | Volume: 29 | Issue: 1 | Pages: 986-993

10.1080/13696998.2026.2645491 | PMID 41879223 Get It

Comparison of Large Language Models with Rules-Based Natural Language Processing Algorithms for Extracting Data from Operative Notes
Yang, Linjun , Mulford, Kellen L. , Girod, Miguel M , Khela, Monty , Khosravi, Amirali , Crossman, Derek M. , Kanabar, Anish , Saniei, Sami , Ulrich, Marisa N. , Taunton, Michael J. , Girod-Hoffman, Miguel M , Wyles, Cody C , Taunton, Michael J , Yang, Linjun , Crossman, Derek , Wyles, Cody C.

Journal of Bone and Joint Surgery | March 24, 2026 | Volume: 108 | Issue: 15 | Pages: 1181-1187

10.2106/jbjs.25.01338 | PMID 41875224 Get It

Background: We aimed to develop automated data extraction pipelines with large language models (LLMs) to extract registry data from total hip arthroplasty (THA) operative notes and compare the performance with that of existing natural language processing (NLP) algorithms. Methods: We randomly sampled 1,000 primary THA cases from our institutional registry. Two human annotators manually reviewed each operative note for 3 data points: surgical approach, bearing surface, and fixation technique. All labeled THA notes were split into the development set (n = 239) and the testing set (n = 719). We developed a custom data extraction pipeline for each data point by combining an iteratively customized prompt with an LLM. The performance was compared with that of existing rules-based NLP algorithms. Results: The accuracy of LLMs was superior to that of NLP algorithms for all data points: surgical approach (96% compared with 94%), bearing surface (89% compared with 74%), and fixation technique (96% compared with 95%). Furthermore, the LLM accurately inferred the bearing surface for 80% of the notes that were ambiguous about the bearing surface. Conclusions: We developed LLM pipelines for extracting 3 registry-relevant data points from THA operative notes, demonstrating superior performance to existing NLP algorithms. Clinical Relevance: LLMs have the potential to impact clinical care, including the evaluation of electronic medical record free-text data. As registries serve as a cornerstone of orthopaedic evidence, this work demonstrates promise for LLMs to simplify, improve, and democratize the construction of registry databases from operative notes.
Sex differences in neuromodulatory subcortical systems and their implications for Alzheimer's disease
Rae, Rosaria J., Alberhasky, Jessica Marie Hunter, Bangasser, Debra A. , Berteotti, Chiara, Bow, Hannah, Caldwell, Jessica Z. K., Carpi, Matteo , Ciampa, Claire J., Ehrenberg, Alexander J. , Fenlon, Haley A., Fitzhugh, Megan C. , Gallay, Clara , Hamilton, Derek A. , Hasan, Zia , Huarte, Oihane Uriarte , Jabeen, Shaista , Kolling, Louis John , Liguori, Claudio , Omoluabi, Tamunotonye, Pa, Judy, Pentkowski, Nathan S. , Pereira, Joana B., Ramos, Rhudovic R., Sargin, Derya , Seto, Mabel, Shaik, Shabana M. , Ucheagwu, Valentine , Kelberman, Michael A. , Grinberg, Lea Tenenholz, Satpati, Abhijit, Son, Gowoon, Rae, Rosaria Josephine, Baillet, Marion , Belloy, Michaël E. , Berry, Anne S. , Berteotti, Chiara , Bow, Hannah, Buckley, Rachel F. , Caldwell, Jessica K. , Clark, Benjamin J. , Conley, Alexander C. , Dahl, Martin J. , Donaldson, Zoe R. , Einstein, Gillian , Falgàs, Neus , Froemke, Robert C. , Grinberg, Lea T. , Jacobs, Heidi I.L. , Koops, Elouise A. , Lenzoni, Sabrina , Manca, Riccardo , Marcinkiewcz, Catherine Anne , Omoluabi, Tamunotonye, Oria, Rademene Sunday , Orsini, Caitlin A. , Ortega, Nancy Elizabeth , Pa, Judy , Pereira, Joana B. , Satpati, Abhijit , Sellés, María Clara , Seto, Mabel , Sindi, Shireen , Son, Gowoon , Egroo, Maxime Van , Yuan, Qi

Alzheimer's & Dementia | March 19, 2026 | Volume: 22 | Issue: 3 | Pages: No page available

10.1002/alz.71291 | PMID 41853971 Get It

Abstract Neuromodulatory subcortical systems (NSSs) are uniquely susceptible to dementia‐related pathology, leading to frequent molecular and behavioral impairments associated with altered function of these nuclei. Some of these systems display clear sex‐specific cytoarchitecture and signaling leading to distinct physiology and behavioral outputs in males and females, while other regions display nominal sex differences. However, the relevance of sex differences in modulating dysfunction of NSSs in Alzheimer's disease (AD) and related dementias is not well understood. This review is a joint effort by the Neuromodulatory Subcortical Systems and Sex and Gender Differences in Alzheimer's Disease Professional Interest Areas of the Alzheimer's Association. We review sex differences in NSSs, both in non‐disease states and in AD models and patients. We highlight the possible role of NSSs in driving sex‐specific AD susceptibility and potential footholds for sex‐based interventions targeting these systems. We conclude by outlining immediate and long‐term actions to address the intersection of NSSs, sex, and AD.
Genomic Extension of HLA‐C*03:31 , by Next‐Generation Sequencing
Merschman, Jarret , Benidt, Derek, Kreuter, Justin D. , Wakefield, Laurie L., Gandhi, Manish J. , Kreuter, Justin, Wakefield, Laurie, Gandhi, Manish

HLA | March 18, 2026 | Volume: 107 | Issue: 3 | Pages: No page available

10.1111/tan.70655 | PMID 41847913 Get It

ABSTRACT The HLA‐C*03:31 allele is characterised by a nucleotide substitution at genomic DNA position 400 in exon 2.
A randomized phase II trial of gemcitabine, nab‐paclitaxel, cisplatin with or without a medically supervised ketogenic diet for patients with metastatic pancreatic cancer
Jameson, Gayle , Roe, Denise J. , Hanna, Diana L. , Pelster, Meredith S. , Frank, Richard C. , Alistar, Angela , Miller, Alan M. , Wiedmeier‐Nutor, J. Erin, Algaze, Sandra D., Zoller, Alison R., Hallberg, Sarah J. , Wertheim, Betsy C., Lee, Keehoon, Cridebring, Derek , Rabinowitz, Joshua D., Gately, Stephen, Keppler, Jennifer, Sharma, Sunil , Hoff, Daniel D. Von, Rasco, Drew , Wiedmeier, Julia E. , Jameson, Gayle S , Hanna, Diana L , Wiedmeier-Nutor, Julia E , Zoller, Alison R , Lee, Keehoon , Cridebring, Derek , Borazanci, Erkut , Roberts, Caroline G. P. , Algaze, Sandra , Rabinowitz, Joshua D. , Hoff, Daniel D. Von

Cancer | March 12, 2026 | Volume: 132 | Issue: 6 | Pages: No page available

10.1002/cncr.70343 | PMID 41817106 Get It

ABSTRACT Background A randomized phase II screening trial of gemcitabine, nab‐paclitaxel, and cisplatin with a medically supervised ketogenic diet (MSKD) versus usual diet (non‐MSKD) was conducted in patients with treatment‐naive metastatic pancreatic ductal adenocarcinoma (PDAC). Methods Patients with untreated metastatic PDAC were randomized 1:1 to MSKD or non‐MSKD while receiving gemcitabine, nab‐paclitaxel, and cisplatin on days 1 and 8 of a 21‐day cycle. The MSKD was guided by a remote health care team and daily ketone (beta‐hydroxybutyrate) levels, with goal beta‐hydroxybutyrate of 0.5 to 3.0 mM. The primary endpoint was progression‐free survival (PFS) using a one‐sided alpha level of 0.20. Secondary endpoints included overall survival (OS), safety, and quality of life (QOL). Changes in microbiome were an exploratory endpoint. Findings Overall, there were 32 evaluable patients. In the MSKD arm, 15 of 16 patients achieved nutritional ketosis; the median proportion of days in ketosis was 39.4%. The median PFS was 8.5 months in MSKD patients and 6.2 months in non‐MSKD patients: hazard ratio, 0.53 (95% CI, 0.21–1.37); one‐sided p = .096. The median OS was 13.7 months with MSKD and 10.2 months in the non‐MSKD arm: hazard ratio, 0.58 (95% CI, 0.25–1.37); one‐sided p = .107). All MSKD‐related adverse events were grade 1‐2. There were no significant differences in grade ≥3 chemotherapy‐related adverse events between the arms. MSKD patients had no decline in QOL and had significant enrichment of beneficial taxa in the microbiome ( p < .05, log‐fold change ≥2). Conclusions The MSKD is feasible in patients with PDAC and, although not powered for definitive outcomes, shows trends in improved PFS and OS when combined with gemcitabine, nab‐paclitaxel, and cisplatin, without added toxicity or detriment to QOL. Larger studies are required to confirm these findings and establish the value of the MSKD in pancreatic cancer treatment.