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Jakub, James W

0000-0002-8005-1072

Mayo Clinic

Division of Surgical Oncology, Mayo Clinic, Jacksonville, FL, USA.

Citations 43

Real-World Tumor-Infiltrating Lymphocyte Therapy for Metastatic Melanoma: Treatment Delivery, Immune Reconstitution, and Cardiac Monitoring During High-Dose IL-2
Aboelatta, Mohamed A. , Zarka, Jabra , Tchatchua, Nika , Aboelatta, Noureldin A., Johnson, Jeffrey , Jakub, James W. , Desroches, Justin , Wilson-Miller, Justine, Tabiim, Anthony Jagri , Behl, Deepti , Montane, Heather N. , Kottschade, Lisa A. , Dimou, Anastasios , Block, M. , Heath, Elisabeth I. , Doonan, Bently, Seetharam, ­Mahesh , Molina, Julian R. , Charnin, Jonathan E. , Gill, Paula, Lin, Yi, Baral, Binav , Markovic, Svetomir N., Dudek, Arkadiusz Z. , Johnson, Jeffrey E , Tabiim, Anthony , Jakub, James W , Dimou, Anastasios , Montane, Heather N , Dudek, Arkadiusz Z , Zarka, Jabra G , Tchatchua, Nika , Wilson-Miller, Justine L., Doonan, Bently P. , Markovic, Svetomir N.

Current Oncology | June 24, 2026 | Volume: 33 | Issue: 7 | Pages: 379

10.3390/curroncol33070379 Get It

Background/Objectives: Tumor-infiltrating lymphocyte (TIL) therapy is an important option for patients with metastatic melanoma progressing after standard systemic therapy, but real-world data on treatment delivery, toxicity monitoring, and immune recovery remain limited. We evaluated clinical outcomes, treatment tolerance, immune reconstitution, and cardiac biomarker dynamics across three Mayo Clinic sites. Methods: We retrospectively analyzed adults with metastatic melanoma who received lymphodepleting chemotherapy followed by TIL infusion and high-dose interleukin-2 (IL-2) between April 2024 and December 2025. Clinical outcomes, treatment delivery, and adverse events were assessed. Longitudinal immune monitoring included CD4 and CD8 T-cell counts, CD4:CD8 ratio, and immunoglobulin G (IgG) at baseline and follow-up. In a prespecified cardiac sub-cohort, high-sensitivity troponin (hs-Tn) was measured during IL-2 administration to evaluate associations with cardiac events and IL-2 interruption. Results: Thirty-six patients underwent TIL infusion. The objective response rate was 50.0%, including complete responses in 13.9%, and the disease control rate was 72.2%. Median progression-free survival was 3.61 months, and median overall survival was 12.94 months. M1d disease was associated with inferior overall survival on univariable analysis (HR 6.55, 95% CI 2.03–21.17; p = 0.002), with attenuation after multivariable adjustment. Receipt of ≥3 IL-2 doses was associated with longer overall survival on univariable analysis (HR 0.20, 95% CI 0.06–0.64; p = 0.007), but this association also attenuated after adjustment. Longitudinal immune monitoring demonstrated persistent CD4 lymphopenia through 6 months, sustained inversion of the CD4:CD8 ratio, and declining IgG at months 3 and 6. In the cardiac sub-cohort (24 patients; 87 IL-2 doses), post-dose hs-Tn ≥15 ng/L was associated with clinically significant cardiac events (OR 9.6, 95% CI 1.5–60.6; p = 0.016) and IL-2 interruption (OR 3.4, 95% CI 1.1–10.7; p = 0.036). For cardiac events, hs-Tn ≥15 ng/L had 100% sensitivity and 100% negative predictive value. Conclusions: In routine practice, TIL therapy was feasible and active in metastatic melanoma. M1d disease identified a subgroup with poor survival, peri-dose hs-Tn showed promise as a tool to support safer IL-2 delivery, and prolonged CD4 suppression with IgG decline suggests that recovery after TIL therapy extends beyond initial hematologic reconstitution. These findings support prospective validation of biomarker-guided IL-2 monitoring and extended post-treatment immune surveillance.
The Human Male Mammary Gland has Similar Epithelial Populations to Female but Distinct Composition and Transcriptional Properties
Ibañez-Rios, M. Iliana , Aalam, Syed Mohammed Musheer , Ritting, Megan L. , Jore, Ashlyn, Chaludia, Keyur, Emperumal, Chitra Priya , Jakub, James W, McLaughlin, Sarah A. , Degnim, Amy C, Boughey, Judy C. , Couch, Fergus J. , Sadanandam, Anguraj , Radisky, Derek, Knapp, David J.H.F., Degnim, Amy C. , Jakub, James W. , Boughey, JC , Couch, Fergus J. , Jakub, James W , Degnim, Amy C , Yadav, Siddhartha , Sadanandam, Anguraj , Sherman, Mark E , Radisky, Derek C , Knapp, David J H F , Kannan, Nagarajan , Musheer Aalam, Syed Mohammed , Yadav, Siddhartha , Sherman, Mark E. , Radisky, Derek C. , Knapp, David J. H. F. , Kannan, Nagarajan

No container title available | March 31, 2026 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.64898/2026.03.27.714915 Get It

ABSTRACT The normal adult male breast has not been characterized at single-cell resolution, leaving the cellular basis of male breast cancer (MBC) biology undefined. Here we present an integrated single-cell RNA sequencing atlas of the adult human breast comprising 174,471 cells from 17 donors (3 male, 14 female), including 18,117 male-derived cells. This revealed that the male breast retains all three epithelial populations, basal (BC), luminal progenitor (LP), and luminal committed cells (LC), but with an increase in LC at the expense of BC and LP across all three male donors. Male LC were distinguished from female by elevated ESR1 and PGR mRNA, enrichment of RNA processing and ribosome biogenesis programs, reduced inflammatory cytokine and growth factor signaling, elevated estradiol gene set enrichment scores, and higher inferred activity of developmental patterning transcription factors. This pattern was observed across differential expression, gene ontology, ligand profiling, and regulon-based analyses, and was not restricted to sex chromosome-linked gene expression. This is consistent with the near-universal estrogen receptor (ER) positivity that characterizes MBC clinically. This atlas provides the first cellular and transcriptional reference for the normal male breast and a resource for investigating sex differences in mammary biology, germline susceptibility variant interpretation, and modeling breast malignancies.
Axillary Lymph Node Dissection With and Without Immediate Lymphatic Reconstruction: Association With Drain Days and Seromas
Brown, Samantha , McLaughlin, Sarah A. , Vijayasekaran, Aparna , Li, Zhuo , Price, M, Jakub, James W. , Brown, Samantha J , Forte, Antonio Jorge , Piltin, Mara A. , Price, Monica M, Jakub, James W , Boughey, Judy C. , Forte, Antonio J. , Hieken, Tina J. , Price, Monica M.

The American Surgeon™ | April 15, 2025 | Volume: 91 | Issue: 8 | Pages: 1323-1330

10.1177/00031348251332692 Get It

Background: Immediate lymphatic reconstruction (ILR) via lymphovenous anastomosis is performed in patients undergoing axillary lymph node dissection (ALND) to minimize the risk of lymphedema. Following ALND, drains are placed to prevent seromas, while prolonged drain days are associated with increased risk of infection. The study aim was to determine the impact of ILR on the number of drain days following ALND in patients with breast cancer. Methods: We report a post-hoc analysis of a prospective trial (April 2018-January 2023) comparing patients with breast cancer who underwent ALND with ILR (intervention arm) vs ALND without ILR (control arm). Wilcoxon rank sum test and chi-squared or Fisher’s exact tests compared continuous and categorical variables, respectively. Multivariable quantile regression models evaluated the difference in drain days and days until drain removal criteria were met with covariates adjusted. Results: Data from 214 patients were analyzed (n = 115 interventional arm, n = 99 control arm). The intervention arm had a median of 15 axillary drain days compared to 11 days in the control arm ( P = .001). There was no significant difference between groups when measuring drain days based on the date the drain met removal criteria, rather than actual drain removal date. Seroma incidence was lower in the intervention arm (3.5%) vs the control arm (12.1%) ( P = .017) without a statistical difference in incidence of infection. Conclusion: ALND with ILR does not decrease the number of drain days compared to ALND without ILR in patients with breast cancer, although we found the incidence of seromas to be lower without increase in incidence of infection.
Melanoma-Derived Extracellular Vesicles Induce CD36-Mediated Pre-Metastatic Niche
Suman, Shankar , Nevala, Wendy K. , Leontovich, Alexey A. , Ward, Caitlin , Jakub, James W. , Kim, Yohan, Geng, Liyi, Stueven, Noah A. , Atherton, Chathu L., Moore, Raymond M. , Schimke, Jill M. , Lucien, Fabrice , McLaughlin, Sarah A., Lucien, Fabrice , Jakub, James W , Moore, Raymond , Markovic, Svetomir N.

Biomolecules | July 12, 2024 | Volume: 14 | Issue: 7 | Pages: 837

10.3390/biom14070837 Get It

CD36 expression in both immune and non-immune cells is known to be directly involved in cancer metastasis. Extracellular vesicles (EVs) secreted by malignant melanocytes play a vital role in developing tumor-promoting microenvironments, but it is unclear whether this is mediated through CD36. To understand the role of CD36 in melanoma, we first analyzed the SKCM dataset for clinical prognosis, evaluated the percentage of CD36 in lymphatic fluid-derived EVs (LEVs), and tested whether melanoma-derived EVs increase CD36 expression and induce M2-macrophage-like characteristics. Furthermore, we performed a multiplex immunofluorescence (MxIF) imaging analysis to evaluate the CD36 expression and its colocalization with various other cells in the lymph node (LN) of patients and control subjects. Our findings show that cutaneous melanoma patients have a worse clinical prognosis with high CD36 levels, and a higher percentage of CD36 in total LEVs were found at baseline in melanoma patients compared to control. We also found that monocytic and endothelial cells treated with melanoma EVs expressed more CD36 than untreated cells. Furthermore, melanoma-derived EVs can regulate immunosuppressive macrophage-like characteristics by upregulating CD36. The spatial imaging data show that cells in tumor-involved sentinel LNs exhibit a higher probability of CD36 expression than cells from control LNs, but this was not statistically significant. Conclusively, our findings demonstrated that CD36 plays a vital role in controlling the immunosuppressive microenvironment in the LN, which can promote the formation of a protumorigenic niche.
Rare Presentation of Papillary Carcinoma Within a Sentinel Lymph Node in a Patient With Ductal Carcinoma in Situ of the Breast: A Challenging but Useful Case Report Discussion Regarding Displacement or True Metastasis?
Sonam, Fnu , Jakub, James W. , Cornell, Lauren , Robinson, Kristin A. , Komforti, Miglena K. , Jakub, James W , Robinson, Kristin A , Fnu, Sonam , Cornell, Lauren F

International Journal of Surgical Pathology | March 19, 2024 | Volume: 32 | Issue: 8 | Pages: 1588-1594

10.1177/10668969241235316 Get It

Papillary carcinoma of the breast is a rare histologic subtype of invasive breast cancer. In contrast, ductal carcinoma in situ (DCIS) is a noninvasive, nonobligate precursor to invasive mammary carcinoma, confined within the terminal duct lobular unit of the breast and surrounded by an intact myoepithelial cell layer at the stromal/epithelial interface. We present an unusual case in which a patient with only DCIS of the breast exhibited papillary carcinoma within a sentinel lymph node, leading to questions about the origin of the lymph node lesion—whether it represents a true metastasis or iatrogenic displacement during diagnostic procedures. This case underscores the diagnostic challenges and clinical implications associated with such rare presentations.
Trimodality Therapy Improves Disease Control in Radiation-Associated Angiosarcoma of the Breast
Degnim, Amy C. , Siontis, Brittany L. , Ahmed, Safia K. , Hoskin, Tanya L. , Hieken, Tina J. , Jakub, James W. , Baum, Christian L. , Day, Courtney N. , Schrup, Sarah E. , Smith, Lauren , Carter, Jodi M. , Sae-Kho, Tiffany M. , Glazebrook, Katrina N. , Vijayasekaran, Aparna , Okuno, Scott H. , Petersen, Ivy A. , Day, Courtney , Siontis, Brittany L , Hieken, Tina J , Degnim, Amy C , Jakub, James W , Hoskin, Tanya , Carter, Jodi

Clinical Cancer Research | May 24, 2023 | Volume: 29 | Issue: 15 | Pages: 2885-2893

10.1158/1078-0432.ccr-23-0443 Get It

Abstract Purpose: To evaluate the impact of trimodality treatment versus monotherapy or dual therapy for radiation-associated angiosarcoma of the breast (RAASB) after prior breast cancer treatment. Experimental Design: With Institutional Review Board approval, we identified patients diagnosed with RAASB and abstracted data on disease presentation, treatment, and oncologic outcomes. Trimodality therapy included (i) taxane induction, (ii) concurrent taxane/radiation, and then (iii) surgical resection with wide margins. Results: A total of 38 patients (median age 69 years) met inclusion criteria. Sixteen received trimodality therapy and 22 monotherapy/dual therapy. Skin involvement and disease extent were similar in both groups. All trimodality patients required reconstructive procedures for wound closure/coverage, compared with 48% of monotherapy/dual therapy patients (P < 0.001). Twelve of 16 (75%) patients receiving trimodality therapy had a pathologic complete response (pCR). With median follow-up of 5.6 years, none had local recurrence, 1 patient (6%) had distant recurrence, and no patients died. Among 22 patients in the monotherapy/dual therapy group, 10 (45%) had local recurrence, 8 (36%) had distant recurrence, and 7 (32%) died of disease. Trimodality therapy demonstrated significantly better 5-year recurrence-free survival [RFS; 93.8% vs. 42.9%; P = 0.004; HR, 7.6 (95% confidence interval, CI: 1.3–44.2)]. Combining all patients with RAASB regardless of treatment, local recurrence was associated with subsequent distant recurrence (HR, 9.0; P = 0.002); distant recurrence developed in 3 of 28 (11%) patients without local recurrence compared with 6 of 10 (60%) with local recurrence. The trimodality group had more surgical complications that required reoperation or prolonged healing. Conclusions: Trimodality therapy for RAASB was more toxic but is promising, with a high rate of pCR, durable local control, and improved RFS.
Ultrasonographic Detection and Surgical Retrieval of a Nonmetallic Twinkle Marker in Breast Cancer: Pilot Study
Jakub, James W. , Hesley, Gina K. , Larson, Nicholas B. , Yaszemski, Michael J. , Greenleaf, James F. , Urban, Matthew W. , Lee, Christine U. , Hesley, Gina , Urban, Matthew W , Lee, Christine , Jakub, James W , Larson, Nicholas B , Miller, Alan Lee

Radiology: Imaging Cancer | November 11, 2022 | Volume: 4 | Issue: 6 | Pages: No page available

10.1148/rycan.220053 Get It

Response Rates of Invasive Lobular Cancer in Patients Undergoing Neoadjuvant Endocrine or Chemotherapy
Jakub, James W. , Zhang, Wenexia , Solanki, Malvika , Harmsen, Scott, Zhang, Wenxia , Yonkus, Jennifer, Jakub, James W , Yonkus, Jennifer A. , Boughey, Judy C. , Giridhar, Karthik V.

The American Surgeon™ | October 28, 2022 | Volume: 89 | Issue: 2 | Pages: 230-237

10.1177/00031348221135778 Get It

Background A gap remains in the role of neoadjuvant therapy for patients with ILC. Method Single-institution retrospective review of patients with ILC who received neoadjuvant therapy between 2008 and 2019. Results 141 patients met inclusion criteria: 71 neoadjuvant chemotherapy (NACT) and 70 neoadjuvant endocrine therapy (NET). 7/71 (9.9%) patients had a pCR following NACT compared to 1/70 (1.4%) with NET ( P = .063). pCR was observed in 5/18 (27.8%) patients with Her2Neu-positive disease following NACT, compared to 2/53 (3.8%) with Her2Neu-negative disease ( P = .01). For luminal B tumors, median Ki-67 decrease was similar following NACT and NET (18.3 vs 16.3, P = .26). T category decreased in 59 (42.1%) patients following neoadjuvant therapy, increased in 9 (6.4%), and was unchanged in 72 (51.4%). More patients had an increase (28.6%) than decrease (12.1%) in their N category, including 13/60 (21.7%) who were clinically node-negative at diagnosis and identified to have node-positive disease following neoadjuvant therapy, at definitive surgery. Conclusion In Her2Neu-negative ILC, the potential of a pCR with NACT or NET is low. Most patients’ nodal status and tumor size remain unchanged. There is a potential for pathologic stage to be higher at surgery compared to the clinical stage prior to neoadjuvant therapy.
Racial‐ethnic variations in phyllodes tumors among a multicenter United States cohort
Nash, Amanda L. , Nimbkar, Suniti, Hieken, Tina J. , Ludwig, Kandice K. , Jacobs, Lisa K. , Gallagher, Kristalyn K. , Wong, Jasmine , Neuman, Heather B. , Tseng, Jennifer , Hassinger, Taryn E. , King, Tari A. , Hwang, E. Shelley , Jakub, James W. , Hwang, E. Shelley , Hieken, Tina J , Neuman, Heather B , Jakub, James W , Thomas, Samantha Marie , Miller, Megan E. , Rosenberger, Laura H.

Journal of Surgical Oncology | October 7, 2022 | Volume: 127 | Issue: 3 | Pages: 369-373

10.1002/jso.27117 Get It

AbstractBackground and objectivesPrevious studies have identified racial‐ethnic differences in the diagnostic patterns and recurrence outcomes of women with phyllodes tumors (PT). However, these studies are generally limited in size and generalizability. We therefore sought to explore racial‐ethnic differences in age, tumor size, subtype, and recurrence in a large US cohort of women with PT.MethodsWe performed an 11‐institution retrospective review of women with PT from 2007 to 2017. Differences in age at diagnosis, tumor size and subtype, and recurrence‐free survival according to race‐ethnicity.ResultsWomen of non‐White race or Hispanic ethnicity were younger at the time of diagnosis with phyllodes tumor. Non‐Hispanic Other women had a larger proportion of malignant PT. There were no differences in recurrence‐free survival in our cohort.ConclusionsDifferences in age, tumor size, and subtype were small. Therefore, the workup of young women with breast masses and the treatment of women with PT should not differ according to race‐ethnicity. These conclusions are supported by our finding that there were no differences in recurrence‐free survival.
Chest wall resection for breast cancer: 21st century Mayo clinic experience
Durgan, Diane M., Thomas, Mathew , Pockaj, Barbara A. , McLaughlin, Sarah A. , Casey, William J., Vijayasekaran, Aparna , Wigle, Dennis A. , Cheville, John C. , Tonneson, Jennifer E., Jakub, James W. , De La Cruz Ku, Gabriel, Wigle, Dennis, Tonneson, Jennifer, Hoskin, Tanya L. , Jakub, James W , Thomas, Mathew , Ku, Gabriel De la Cruz

Journal of Surgical Oncology | July 13, 2022 | Volume: 126 | Issue: 6 | Pages: 962-969

10.1002/jso.27014 Get It

AbstractBackgroundWe hypothesized full‐thickness chest wall resection (FTCWR) with advanced surgical techniques and modern systemic therapy is safe, provides local control, and good overall survival.MethodsRetrospective review of FTCWR (including rib or part of sternum) for breast cancer between 2000 and 2020. Primary endpoints included 90‐day morbidities and all‐cause mortality. Secondary endpoints were loco‐regional and distant recurrence, DFS and overall survival (OS).ResultsA total of 35 patients met the criteria. 34 FTCWR were for recurrence and the median time to chest wall recurrence was 6 years. Tumor subtype was triple‐negative in 51% and the remainder HR+ Her2−. 58% were palliative resections. FTCWR included rib(s) in 89% and portion of sternum in 57%; 94% required reconstruction and 80% were R0 resections. There were no 90‐day mortalities. Overall morbidity was 10/35(28%). 17(49%) patients received neoadjuvant systemic therapy for their recurrence and three received neoadjuvant radiation. Adjuvant treatment included chemotherapy (8), endocrine therapy (3), and both (8). Ten patients (28%) received adjuvant radiation. The Median follow‐up was 31 months and there were 6 (17%) loco‐regional and 7 (20%) distant recurrences. OS was 86% and 67% at 1 and 3 years, respectively.ConclusionFTCWR was associated with low morbidity, mortality, recurrence rates, and good OS. Selective FTCWR is safe and has acceptable short‐term survival rates.