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12604 citation(s) found for "Wu, John C".

Germline genetic variants and epilepsy surgery response: individual-participant pooled analysis of 269 patients
Ivaniuk, Alina, Bajaj, Sunanjay , Bosselmann, Christian M, Koh, Hyun Yong, Pestana-Knight, E, Zhang, Xiaoming, Bingaman, William, Najm, Imad, Shah, Manish N., Tandon, N., Allmen, Gretchen Von , Lhatoo, Samden D. , Tatum, William, Freund, Brin , Miller, Kai J. , Wirrell, Elaine, Coryell, J., Schreiber, John, Perry, Scott, Lal, Dennis , Ivaniuk, Alina , Ivaniuk, Alina , Boßelmann, Christian M. , Koh, Hyun Yong , Pestana‐Knight, Elia , Bingaman, William , Najm, Imad , Shah, Manish N. , Tatum, William, Wirrell, Elaine , Fine, Anthony L. , Coryell, Jason , Schreiber, John R. , Perry, Scott

No container title available | March 15, 2026 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.64898/2026.03.10.26347961 Get It

Abstract Background Genetic testing is increasingly used in presurgical evaluation, but the yield of resection across germline genetic epilepsies remains uncertain. Methods We conducted a systematic review of MEDLINE (PubMed) and Scopus and added cases from three institutional cohorts and the Pediatric Epilepsy Research Consortium (PERC) databases, including individuals with pathogenic/likely pathogenic germline variants besides tuberous sclerosis and neurofibromatosis who underwent resection or laser ablation. Etiologies were grouped into biologically informed categories (GATORopathies, vascular, overgrowth, CNVs, channelopathies, synaptopathies, other). Primary outcome was seizure freedom (Engel I) at last follow-up. Group comparisons used Fisher’s exact and Kruskal–Wallis tests (α=0.05; Bonferroni when applicable). Prespecified sensitivity analyses stratified by lesional status, excluded GATORopathies, and restricted to literature-only cases. Results We included 223 literature cases (64 studies), 35 institutional cases, and 11 PERC cases (n=269). Median follow-up was 24 months (IQR 12–48.0). Seizure freedom was achieved in: vascular disorders 14/19 (73.6%), GATORopathies 79/120 (67.5%), CNVs 18/31 (66.7%), overgrowth 7/13 (53.8%), other 16/25 (41.7%), channelopathies 13/43 (33.3%), and synaptopathies 4/18 (22.2%) (overall p<0.001). Among cases with known imaging, 208/253 (82.2%) had epileptogenic MRI lesions, including 64% of channelopathies and 80% of the synaptopathies. In univariate contrasts (each category vs all others), odds of seizure freedom were higher for vascular disorders (2.66-fold, 95% CI 0.87–9.72) and GATORopathies (2.46-fold, 95% CI 1.46–4.18), and lower for synaptopathies (∼4.2-fold lower, OR 0.24, 95% CI 0.05– 0.78) and channelopathies (∼4.5-fold lower, OR 0.22, 95% CI 0.09–0.48). Direction and magnitude were consistent across prespecified sensitivity analyses (lesional-only, literature-only, exclusion of GATORopathies). Conclusions Resective surgeries can be effective in germline genetic epilepsies, but outcomes vary by pathway. Disorders with discrete, lesional substrates (GATORopathies, vascular) show the highest likelihood of seizure freedom, whereas channelopathies and synaptopathies, despite the presence of MRI lesions, have substantially lower yields even in lesional cases. Prospective, genotype-aware surgical registries with standardized reporting (EEG, imaging, pathology) and time-to-event outcomes are needed to refine the selection of surgical candidates and quantify seizure and non-seizure-related outcomes.
Analysis of Gene Expression Changes upon Topobexin Treatment and TOP2B-knockout in hiPSC derived cardiomyocytes
Keresteš, Veronika , Cowell, Ian G. , Jirkovská, Anna , Karabanovich, Galina , Melnikova, Iuliia , Šimůnek, Tomáš , Schellenberg, Matthew J. , Creigh, Adam R. , Yang, Chunbo, Lako, M., Cowell, Ian , Simunek, Tomas , Khazeem, Mushtaq M. , Casement, John , Kubes, Jan , Roh, Jaroslav , Lako, Majlinda , Armstrong, Lyle , Austin, Caroline

No container title available | March 14, 2026 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.64898/2026.03.09.710520 Get It

Abstract The role of DNA topoisomerase II beta (TOP2B) in cardiomyocyte differentiation is poorly understood. To address this, Human induced pluripotent stem cells (hiPSC) were differentiated into cardiomyocytes (CM) that are wildtype or contain a genomic deletion of Topoisomerase 2B (BKO). Both WT and BKO hiPSC could be induced to differentiate into sheets of beating cardiomyocytes. BKO hiPSC take slightly longer to differentiate into sheets of beating CM than WT iPSC. RNA was prepared from both undifferentiated and differentiated WT and BKO hiPSC. RNA seq was used to examine gene expression changes when the WT and BKO hiPSC were differentiated into CM. Gene expression changes following differentiation of BKO cells were largely similar to those in WT cells. In addition, the differentiated WT CM were treated with dexrazoxane (ICRF-187), a TOP2 catalytic inhibitor that targets both TOP2A and TOP2B, or topobexin, a new TOP2B selective catalytic inhibitor. Topobexin inhibition partially phenocopied a TOP2B deletion and thus providing an alternative to TOP2B gene knockout in many cell lines. In future, hiPSC derived CM with and without TOP2B and inhibition by topobexin ex vivo CM could be used to study anthracycline-induced cardiotoxicity and to screen for cardioprotectants. Highlights Used CRISPR-Cas9 to delete TOP2B from hiPSC Produced beating cardiomyocytes from both WT and TOP2B null hiPSC Transcriptome analysis of WT and TOP2B null hiPSC and derived cardiomyocytes RNA seq showed he specific TOP2B inhibitor topobexin largely phenocopies TOP2B gene inactivation in iPSC derived cardiomyocytes. Topobexin inhibition could be used as an alternative to a TOP2B gene knockout in many different cell types, speeding up the analysis of the function of TOP2B.
Abstract B014: GPNMB:CD44 signaling drives tumor progression in translocation renal cell carcinoma
Woo, Juhyung , Feng, Kewen, Amaral, Adrianna, Palande, Vikrant , Mandal, Jayaprakash, Ray, Sangeeta, Li, H, Ged, Yasser , Singla, Nirmish, Copland, John A. , Schmidt, Laura, Linehan, W. Marston, Argani, Pedram, Lotan, Tamara, Asrani, Kaushal V. , Vidotto, Thiago , Mandal, Jayaprakash , Imada, Eddie L. , Thoburn, Christopher J. , Singla, Nirmish , Linehan, W. Marston, Argani, Pedram , Lotan, Tamara Levin

Cancer Research | March 13, 2026 | Volume: 86 | Issue: 5_Supplement_2 | Pages: B014-B014

10.1158/1538-7445.kidney26-b014 Get It

Abstract GPNMB (Glycoprotein non-metastatic melanoma protein B) is a canonical transcriptional target of MiT/TFE proteins (TFEB/TFE3/MITF), expressed at low levels in normal tissues but upregulated in numerous MiT/TFE-driven tumors such as translocation RCC, alveolar soft part sarcoma and MITF-driven melanoma, where it is associated with poor prognosis. CDX-011 (CR011-MMAE) is an anti-GPNMB ADC, with demonstrated efficacy in pre-clinical models of TFE3-fusion RCC. To further characterize GPNMB functionality and value as a cell-surface therapeutic target in tRCC, we engineered cell lines with genomic deletion of GPNMB via CRSIPR-Cas9 editing. Deletion of GPNMB in PRCC-TFE3 cell lines [UOK120/UOK124] significantly decreased clonogenic growth in 2D, spheroid size and viability and tumor xenograft growth in NSG mice and was associated with a decrease in phosphorylation of mTORC1 substrates [p-P70S6K, p-4EBP1]. We then examined expression of CD44, the primary receptor for GPNMB, and a tumor-associated antigen associated with poor prognosis in many cancers. Expression of CD44 and its ligand SPP1/OPN, was significantly increased in bulk RNA-Seq data from multiple transgenic models of SFPQ-TFE3, PRCC-TFE3 and ASPSCR1-TFE3, in human tRCC cases compared to normal kidney, and in SFPQ-TFE3/ PRCC-TFE3 transgenic kidney tumors and an ASPSCR-TFE3 PDX model, by immunoblotting and IHC, with increased membrane localization. shRNA-mediated depletion of CD44 profoundly and specifically decreased clonogenicity of multiple TFE3-fusion lines, with no effect seen in ccRCC lines. In conclusion, GPNMB regulates the growth of tRCC cells, potentially via an autocrine mechanism involving its receptor CD44, and targeting GPNMB-CD44 signaling may be of therapeutic benefit in tRCC. Citation Format: Kaushal Asrani, Juhyung Woo, Kewen Feng, Thiago Vidotto, Adrianna Amaral, Vikrant Palande, Jayaprakash Mandal, Eddie Imada, Christopher Thoburn, Sangeeta Ray, Huili Li, Yasser Ged, Nirmish Singla, John A. Copland, Laura Schmidt, W. Marston Linehan, Pedram Argani, Tamara Lotan. GPNMB:CD44 signaling drives tumor progression in translocation renal cell carcinoma [abstract]. In: Proceedings of the AACR Special Conference in Cancer Research: Innovations in Kidney Cancer Research: From Molecular Insights to Therapeutic Breakthroughs; 2026 Mar 13-16; Philadelphia, PA. Philadelphia (PA): AACR; Cancer Res 2026;86(5_Suppl_2):Abstract nr B014.
Radiotherapy for indolent primary cutaneous B-cell lymphoma: an international multicenter ILROG analysis
Dabaja, Bouthaina S., Görlich, Dennis , Thomas, Bjorn , Sim, Van , Johnstone, P., Hashmi, Ayesha, Levis, M., Ackerson, Bradley, Hague, Christina J. , Roos, Daniel Edward, Kirova, Y., Fietkau, Rainer, Fang, Penny Q., Ng, A., Bock, Felix, Linde, Philipp , Dunst, Jürgen, Terezakis, Stephanie A, Easwaran, Teresa, Peeken, Jan C. , Wittig, Andrea, Yoon, Hong In , Illidge, Tim , Ricardi, U., Morris, S., Storck, Michael , Hoppe, Richard T, Eich, Hans Theodor, Hoppe, Richard T. , Levis, Mario , Oertel, Michael , Görlich, Dennis , Thomas, Bjorn R , Sim, Van , Levis, Mario , Weil, Christopher R , Bock, Felix , Peeken, Jan C , Yoon, Hong In , Tao, Randa , Binkley, Michael Sargent , Campbell, Belinda A , Elsayad, Khaled , Storck, Michael , Hoppe, Richard T , Hashmi, Ayesha , Weil, Christopher R. , Plastaras, John Peter , Roos, Daniel E. , Fietkau, Rainer , Fang, Penny , Tseng, Yolanda D. , Tao, Randa , Kelsey, Chris R. , Binkley, Michael S. , Eich, Hans Theodor

Blood | March 13, 2026 | Volume: 147 | Issue: 25 | Pages: 3051-3060

10.1182/blood.2025032050 | PMID 41824381 Get It

Abstract Radiotherapy is an established treatment for low-grade primary cutaneous B-cell lymphoma. Recommendations on its use differ internationally, which prompted our group to conduct this analysis. Twenty-two institutions participated in this international study. Patient eligibility required a diagnosis of limited (T1/T2) primary cutaneous marginal zone or follicle center lymphoma treated with radiotherapy between 1995 and 2023. Data were collected retrospectively until February 2024 within the framework of the International Lymphoma Radiation Oncology Group. Overall, 535 patients were analyzed. Predominant locations were the head (40%) and trunk (36%). Radiotherapy had a median dose of 24 Gy in fractions of 2 Gy. Complete responses were observed in 91% at a median time of 3.6 months following radiotherapy. There was no statistically significant difference between treatments ≤4 Gy and &gt;4 Gy for complete or overall response rates (P = .077 and P = .056, respectively). However, there was an inferior duration of local control with ≤4 Gy (5-year local control 73% ± 12% vs 96% ± 2%; P&lt; .001). Radiation dose was the main prognostic factor in the univariate and multivariable Cox analysis; however, higher doses did not translate into an overall survival benefit. Toxicities rarely exceeded grade 2 but were more frequent in the &gt;4 Gy group. Radiotherapy remains an effective treatment option for indolent skin lymphoma with low toxicity. High response rates are observed with low doses of ≤4 Gy. In comparison to conventional doses, these treatments have a shorter duration of local control but a favorable toxicity profile.
Short bowel syndrome-associated intestinal failure: diagnosis and prognosis
DiBaise, John K.

Expert Review of Gastroenterology & Hepatology | March 13, 2026 | Volume: 20 | Issue: 4 | Pages: 313-323

10.1080/17474124.2026.2646296 | PMID 41823888 Get It

Acid–Base Status During Venoarterial Extracorporeal Membrane Oxygenator Support in Patients With Cardiogenic Shock
Dahiya, Garima , Bohman, J. Kyle, Tonna, Joseph E. , Augustin, Katrina , Yalamuri, Suraj , Kashani, Kianoush , Jentzer, Jacob C. , Tonna, Joseph E. , Bohman, John K , Hillerson, Dustin , Augustin, Katrina J , Yalamuri, Suraj M, Kashani, Kianoush B , Jentzer, Jacob C , Bohman, J. Kyle , Hillerson, Dustin

Journal of the American Heart Association | March 13, 2026 | Volume: 15 | Issue: 6 | Pages: No page available

10.1161/jaha.125.043615 | PMID 41823232 Get It

Background The prognostic significance of an adverse acid–base milieu despite venoarterial extracorporeal membrane oxygenation support in patients with cardiogenic shock remains poorly defined. We examined metabolic and respiratory disturbances in the ELSO (Extracorporeal Life Support Organization) Registry among patients who received venoarterial extracorporeal membrane oxygenation support for refractory cardiogenic shock. Methods Arterial blood gas acid–base values at 24 hours following venoarterial extracorporeal membrane oxygenation initiation were analyzed, with patients classified by pH, arterial partial pressure of carbon dioxide, and bicarbonate. Multivariable logistic regression and exploratory machine learning analyses were used to assess predictors of in‐hospital mortality. Results Among 15 144 adult patients, 74.6% (10 860) had neither respiratory nor metabolic acidosis, 13.1% (1909) had isolated respiratory acidosis, 11.6% (1684) had isolated metabolic acidosis, and 0.7% (100) had combined acidosis. In‐hospital mortality occurred in 7719 (51.0%) patients and increased incrementally across patients with lower pH (adjusted odds ratio [OR], 2.03 with each 0.1‐unit decrease in pH, using 7.4 as a reference point [95% CI, 1.82–2.26]), bicarbonate (adjusted OR, 1.93 per each 5‐mEq/L <24 mEq/L [95% CI, 1.76–2.12]) or base excess (adjusted OR, 1.90 per each 5‐mEq/L <0 mEq/L [95% CI, 1.75–2.07]) (all P <0.01). Mortality varied significantly, being highest for the low‐pH metabolic acidosis cluster (adjusted OR, 1.90 [95% CI, 1.70–2.12], P <0.01). Conclusions Survival decreased progressively with worse acidemia or metabolic acidosis despite 24 hours of hemodynamic support with venoarterial extracorporeal membrane oxygenation among patients with cardiogenic shock. Our findings emphasize the prognostic significance of metabolic parameters as potentially modifiable risk factors and underscore the need for early recognition and interventions to mitigate severe metabolic derangements.
From Insight to Action: A National Patient‐Centered Strategic Framework for Improving Reproductive Health Outcomes in Individuals With Congenital Heart Disease
Messmer, Mindi , Gupta, Tripti , D'Souza, Rohan , Russo, Melissa L. , Jackson, Jamie L. , Singh, Kashvi , Salciccioli, Katherine B. , Bravo‐Jaimes, Katia, Abusbeitan, Ayesha, Cortes, Jennifer, Hile, Danielle, Phillippi, Ruth, Leezer, Scott, John, Anitha S. , Bravo‐Jaimes, Katia , D’Souza, Rohan , Russo, Melissa , Bravo-Jaimes, Katia , Kasparian, Nadine A , Abusbeitan, Ayesha , Hile, Danielle , John, Anitha , Jackson, Jamie , Cortes, Jennifer

Journal of the American Heart Association | March 13, 2026 | Volume: 15 | Issue: 6 | Pages: No page available

10.1161/jaha.125.046867 | PMID 41823229 Get It

Background An increasing number of patients with congenital heart disease (CHD) are pursuing pregnancy with the potential for cardiovascular complications. This study aimed to establish patient‐centered national research and care priorities to improve pregnancy‐related outcomes for individuals with CHD. Methods This mixed‐methods study used a modified Stakeholder Engagement in Question Development methodology to systematically identify patient‐centered priorities. Key activities included consortium engagement (phase 1), patient and provider questionnaires (phase 2), and an in‐person facilitated meeting to explore survey results and follow‐up virtual focus groups (phase 3). Reflexive thematic analysis was used to synthesize short‐ and long‐term research priorities (phase 4). Results Three overarching goals emerged: (1) improving access to specialized CHD, cardio‐obstetrics, and mental health care; (2) improving quality and consistency in clinical care; and (3) increasing patient and community engagement. These goals were then expanded into 5 central themes: (1) communication within the health care setting; (2) community engagement; (3) ancillary clinical support; (4) integration of patient‐reported outcomes; and (5) implementation, education, and knowledge mobilization. Short‐term (1–5‐year) goals included expanded telemedicine use, best practice recommendations for multidisciplinary care coordination, and targeted educational resources. Long‐term (5–10‐year) goals included expansion of adult CHD and cardio‐obstetrics programs, integration of mental health services, and advocacy to improve insurance coverage. Conclusions The consortium provided a national, community‐driven prioritization that highlights actionable pathways to improve pregnancy outcomes for people with CHD. Sustained engagement with patients and community partners is essential to achieving durable improvements across cardio‐obstetric care, education, research, and mental health.
Gatherings in Esophagology: Innovations and Future Directions in the Diagnosis and Management of Reflux Disease
Cable, Jennifer, Giuli, R, Fox, Mark , Rosen, Rachel L., Valdovinos‐García, Luis R., Siboni, Stefano, Clarke, John O. , Samuels, Tina L. , Scarpignato, Carmelo , Fass, Ronnie, Remes-Troche, José María, Khan, Abraham, Rahman, Afrin Kamal, Lynch, Kristle L. , Jodorkovsky, Daniela , Vela, Marcelo F. , Vandenberg, Alexandra, Kuo, Braden, Ergün, Pelin , Jirapinyo, Pichamol, Asti, Emanuele, Tolone, Salvatore, Salvador, Renato , Sozzi, Marco, Husain, Inna, Wu, J. , Hobson, Anthony, Sharma, Nirmal , Gyawali, C. Prakash, Sifrim, Daniel, Savarino, E V, Bortoli, Nicola De, Rogers, Benjamin D. , Clarke, J , Valdovinos-García, Luis R. , Siboni, Stefano , Johnston, Nikki , Stein, Ellen M. , Fass, Ronnie , Remes Troche, José M , Kuo, Braden , Jirapinyo, Pichamol , Asti, Emanuele , Sheu, Eric Garland , Sozzi, Marco , Hobson, Anthony, Lo, Wai–Kit , Duncan, Daniel R. , Gyawali, C. Prakash , Chan, Walter W. , Sifrim, Daniel

Annals of the New York Academy of Sciences | March 12, 2026 | Volume: 1557 | Issue: 1 | Pages: No page available

10.1111/nyas.70225 | PMID 41817458 Get It

ABSTRACT Recent advances in the diagnosis and management of reflux disease were the central focus of the inaugural Gatherings in Esophagology (GiE), which convened experts across gastroenterology, surgery, otolaryngology, pulmonology, and basic research. The sessions highlighted innovations in reflux monitoring—including high‐resolution manometry, wireless pH monitoring, and novel salivary biomarkers—while critically evaluating their diagnostic accuracy and clinical utility. Presentations explored the limitations of traditional proton‐pump inhibitor therapy, the emergence of potassium‐competitive acid blockers as a new class of acid suppressants, and the evolving role of adjunctive treatments such as mucosal protectants, reflux reducers, and neuromodulators for refractory symptoms. The discourse extended to advanced interventional procedures, including transoral incisionless fundoplication, magnetic sphincter augmentation, and the RefluxStop device, with discussion of patient selection, efficacy, and complication management. Discussants emphasized the pathophysiology and management of extraesophageal manifestations of reflux, the interplay between reflux and pulmonary disease, and the diagnostic challenges in pediatric populations. The meeting also addressed the integration of behavioral therapies, the role of the microbiome, and the application of artificial intelligence in reflux diagnostics. Collectively, these insights underscore a shift toward precision medicine in reflux disease, emphasizing individualized diagnostic strategies and tailored therapeutic approaches to improve patient outcomes.
Instruction of Hospitalized Patients by Respiratory Therapists on Metered-Dose Inhaler Use Leads to Decrease in Patient Errors
Song, CPT Won S, Mullon, MAJ John, Regan, Nora, Roth, Bernard, Song, CPT Won S, Mullon, MAJ John, Roth, COL Bernard J

Respiratory Care | March 12, 2026 | Volume: 50 | Issue: 8 | Pages: 1040-1045

10.4187/respcare.05501040 Get It

Book Review: Chemistry and Physics for Nurse Anesthesia: A Student Centered Approach. David Shubert PhD and John Leyba PhD. New York: Springer. 2009. Soft cover, illustrated, 423 pages, $80.
Pasternak, Jeffrey J., Dietz, Christopher K, Ward, Jeffrey J

Respiratory Care | March 12, 2026 | Volume: 55 | Issue: 7 | Pages: 952-954

10.4187/respcare.10550952 Get It