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10814 citation(s) found for "Qi, Robert".

Human Papillomavirus Test Agreement Between Self-Collected Vaginal and Clinician-Collected Cervical Specimens
Cyriac, Jissy , Theel, Elitza S. , Long, Margaret E. , Maxson, Julie, Cole, Kristin C., Lin, Iris, McCann, J P, Gallagher, Elise M., Meunier, Matthew R., Rutten, Lila J. Finney, Binnicker, Matthew J. , MacLaughlin, Kathy L. , Maxson, Julie A, McCann, Jainnee, McCann, Jainnee, Meunier, Matthew R. , Jacobson, Robert M. , Rutten, Lila J. Finney

Journal of Lower Genital Tract Disease | May 26, 2026 | Volume: 30 | Issue: 3 | Pages: 161-168

10.1097/lgt.0000000000000962 | PMID 42185049 Get It

Objectives: We evaluated agreement between human papillomavirus (HPV) tests performed on self-collected vaginal and clinician-collected cervical specimens to advance HPV self-collection as a cervical cancer screening option in our health care system. Methods: This diagnostic accuracy study was conducted at an academic medical center. Participants were 25–65 years old with upcoming colposcopy appointments. One cohort (n = 79) self-collected a vaginal specimen in the clinic immediately before a clinician-collected cervical specimen. The second cohort (n = 115) self-collected a vaginal specimen at home, mailed it in, and had a clinician-collected cervical specimen in the clinic. Paired specimens were evaluated for total (TPA), positive (PPA), and negative (NPA) percentage agreement. Extreme temperature stability studies were also conducted. Results: Compared with clinician-collected cervical specimens, in-clinic self-collected vaginal specimens showed a TPA, PPA, and NPA of 98%, 100%, and 97% for HPV16; 99%, 100%, and 99% for HPV18; 86%, 94%, and 79% for high-risk other (HRO) HPV. The TPA, PPA, and NPA for at-home self-collected vaginal specimens compared with clinician-collected cervical specimens were 94%, 79%, and 96% for HPV16; 95%, 43%, and 98% for HPV18; 89%, 80%, and 93% for HRO. Vaginal specimens showed prolonged stability and were unaffected by extreme temperatures. Conclusions: In general, in-clinic and at-home self-collected vaginal HPV specimens for HPV screening demonstrate high agreement with clinician-collected cervical specimens, with the exception of low PPA in the at-home self-collected vaginal HPV18 subgroup. Our findings support the use of HPV self-collection as a practical option to expand access to cervical cancer screening.
Streamlining Diagnosis of Bardet–Biedl Syndrome: New Diagnostic Algorithm With Updated Criteria
Pomeroy, Jeremy , Richards, Jesse , Kumar, S, Queen, Katie E., Zaritsky, Joshua, Cramer, Carl H. , Traboulsi, Elias I., Scruggs, Brittni A. , Davis, Erica E. , Keifer, Ekaterina , McGibbon, Emma, Ogden, Timothy, Graaf, B. de, Hymers, Tonia, FORSYTHE, ELIZABETH, Beales, Philip , Pomeroy, Jeremy J , Kumar, Seema , Cramer, Carl H , Scruggs, Brittni A , Davis, Erica E , Keifer, Ekaterina , Beales, Philip , Sweeney, Brooke , Zaritsky, Joshua J. , Traboulsi, Elias I. , Ogden, Timothy, Graaf, Bendert De

American Journal of Medical Genetics Part A | May 23, 2026 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.1002/ajmg.a.70199 | PMID 42175648 Get It

ABSTRACT Considerable advances have been made in our understanding of Bardet–Biedl syndrome (BBS), particularly in its core clinical features and molecular genetics, warranting an update to the existing diagnostic criteria framework. Using a rigorous, evidence‐based, and consensus‐driven process, a multidisciplinary group of international experts and patient‐led organizations developed an updated diagnostic algorithm. This algorithm provides practical, updated guidance for clinicians, including a pathway for accurately incorporating genetic findings into the diagnostic process. We recommend that a clinical diagnosis requires either 4 major criteria or 3 major and 2 minor criteria. Revised major criteria are retinal dystrophy, obesity (or overweight in individuals < 2 years old), congenital anomalies of the kidney and urinary tract or chronic kidney disease, hypogonadism/genital anomalies, neurodevelopmental/neurocognitive manifestations, and postaxial polydactyly. The diagnosis can also be established with a positive genetic testing result in patients exhibiting ≥ 1 major criterion, provided that genetic findings should be interpreted in the context of the patient's clinical presentation, age, family history, and overlap with related ciliopathies. These consensus criteria offer a simple algorithm incorporating updated definitions for major and minor criteria and genetic testing to support a timely and accurate diagnosis of patients with BBS, inform genetic counseling, and potentially facilitate earlier access to treatment. Trial Registration: CRIBBS Registry; ClinicalTrials.gov : NCT02329210
Cholangiocyte RUNX1 Orchestrates Fibrogenic and Inflammatory Signaling to Drive Biliary Fibrosis
Aseem, Sayed Obaidullah , Wang, J, Nakib, Diana , Way, Grayson, Carter, C. Ross , Zhao, Derrick, Tai, Yunling, Wang, Xuan, Gurley, Emily, MacParland, Sonya, Hylemon, Phillip B, Jalan-Sakrikar, Nidhi, Karpen, Saul J, Sanyal, Arun J, Zhou, Huiping, Younis, Ahmed M. , Way, Grayson W. , Carter, Christiane, Wang, Xuan, MacParland, Sonya A. , Bajaj, Jasmohan S , Jalan‐Sakrikar, Nidhi , Huebert, Robert C. , Karpen, Saul , Sanyal, Arun J. , Zhou, Huiping

No container title available | May 23, 2026 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.64898/2026.05.20.726667 | PMID 42239059 Get It

Abstract Introduction Biliary fibrosis and inflammation are central to the pathogenesis of cholangiopathies such as primary sclerosing cholangitis (PSC) and primary biliary cholangitis (PBC). Inflammatory and fibrogenic stimuli, such as transforming growth factor-β (TGFβ) and lipopolysaccharide (LPS) signaling, drive these processes, but their underlying transcriptional mechanisms in cholangiocytes remain incompletely defined. We investigated the role of Runt-related transcription factor 1 (RUNX1) as a transcriptional co-regulator of fibroinflammatory signaling in cholangiocytes. Methods Human PSC-derived cholangiocytes (PSC-Cs) and mouse large biliary epithelial cells (MLEs) were subjected to RUNX1 knockdown or pharmacologic inhibition (Ro5-3335 or AI-10-104). Cytokine secretion was profiled by Luminex multiplexing; RUNX1 genomic binding and protein interactome were assessed by ChIP-qPCR, ChIP-seq, and LC-MS/MS. In vivo , Mdr2 −/− mice received Ro5-3335, and cholangiocyte-selective Runx1 knockout mice (Krt19-CreERT) were challenged with a DDC diet, followed by evaluation of fibrosis and inflammation. Results RUNX1 expression was significantly increased in cholangiocytes from PSC and PBC patients, and Mdr2 −/− mice. RUNX1 knockdown or inhibition reduced IL6, TNFα, and other proinflammatory cytokines in PSC-Cs and attenuated TGFβ-, LPS-, and TNFα-induced Il6 and Ccl2 expression in MLEs. ChIP-qPCR and ChIP-seq revealed TGFβ-induced RUNX1 binding to the Il6 promoter and 727 additional genomic sites enriched for fibrosis and inflammatory pathways; predicted upstream regulators included TGFβ, TNF, and NFκB signaling. Proteomic analysis identified TGFβ-induced RUNX1 interactions with SMAD2 and NFκB2. In vivo , Ro5-3335 treatment in Mdr2 −/− mice reduced hepatic collagen, ECM gene expression, immune cell infiltration, and serum liver injury markers and bile acids. Similarly, cholangiocyte-specific Runx1 deletion mitigated fibrosis, inflammation, and liver injury in DDC-fed mice. Conclusion RUNX1 is a central transcriptional hub integrating TGFβ and inflammatory signals in cholangiocytes. Its inhibition attenuates biliary fibrosis and inflammation in cholestatic models, supporting RUNX1 as a potential therapeutic target in fibroinflammatory cholangiopathies.
Treatment Effect Reanalysis of the Randomized Individual Screening Trial of Innovative Glioblastoma Therapy in Newly Diagnosed Glioblastoma With External Control Data
Gupta, Tulika Rudra, Polley, Mei‐Yin C. , Redd, Robert , Lee, Eudocia Q., Arrillaga‐Romany, Isabel , Tan, Yujue, Welch, Mary R., Galanis, E, Ahluwalia, Manmeet S., Colman, Howard , Nabors, L. Burt, Hepel, Jaroslaw, Elinzano, Heinrich, Chukwueke, Ugonma N., Beroukhim, Rameen, Nayak, L., McFaline-Figueroa, J. Ricardo, Batchelor, Tracy T. , Lu‐Emerson, Christine , Bi, W. L., Arnaout, Omar, Peruzzi, Pier Paolo, Haas-Kogan, Daphne, Aizer, Ayal , Doherty, Lisa, Chiocca, E Antonio, Reardon, David A. , Wen, Patrick Y. , Trippa, Lorenzo , Rahman, Rifaquat, Gilbert, Mark R. , Redd, Robert , Lee, Eudocia Q , Gilbert, Mark R , Touat, Mehdi , Welch, Mary R , Ahluwalia, Manmeet S , Colman, Howard , Nabors, Louis Burt , Schiff, David , Nayak, Lakshmi , Batchelor, Tracy T , Kaley, Thomas , Lu-Emerson, Christine , Mellinghoff, Ingo K , Peruzzi, Pier Paolo , Haas-Kogan, Daphne , Tanguturi, Shyam K , Aizer, Ayal , Chiocca, E Antonio , Reardon, David A , Ligon, Keith L , Weller, Michael , Mehta, Minesh P , Wen, Patrick Yung , Rahman, Rifaquat , Lee, Eudocia Q. , Arrillaga‐Romany, Isabel , Drappatz, Jan , Galanis, Evanthia , Ahluwalia, Manmeet S. , Nabors, Burt , Hepel, Jaroslaw T., Elinzano, Heinrich, Chukwueke, Ugonma , Nayak, Lakshmi , McFaline-Figueroa, J Ricardo , Mellinghoff, Ingo K. , Arnaout, Omar M. , Haas‐Kogan, Daphne A. , Doherty, Lisa, Santagata, Sandro , Meredith, David M. , Mehta, Minesh P. , Rahman, Rifaquat

Journal of Clinical Oncology | May 22, 2026 | Volume: 44 | Issue: 21 | Pages: 2048-2058

10.1200/jco-25-01586 | PMID 42172567 Get It

PURPOSE Integrating external control data into clinical trial designs and analyses has the potential to accelerate drug development processes. We reanalyzed the three experimental arms of the Individual Screening Trial of Innovative Glioblastoma Therapy (INSIGhT), a randomized phase II platform trial in newly diagnosed O 6 -methylguanine-DNA methyltransferase-unmethylated glioblastoma (ClinicalTrials.gov identifier: NCT02977780 ). To evaluate the validity of using external data sets, we compared treatment effect estimates based on internal INSIGhT control data and matched external control data. METHODS The three experimental arms of INSIGhT (abemaciclib [n = 72], neratinib [n = 80], and CC-115 [n = 12]) did not improve survival compared with internal controls (standard chemoradiation [n = 70]). We derived external control patient-level data from multiple real-world and clinical trial data sets. We applied propensity score matching and Cox proportional hazards models to estimate treatment effects with external controls. Additionally, using this glioblastoma (GBM) data collection, we specified simulation scenarios to evaluate trial designs that integrate external controls. RESULTS After matching to external controls, no survival benefit was observed for patients receiving abemaciclib (hazard ratio [HR], 1.00 [95% CI, 0.75 to 1.34]), neratinib (HR, 0.93 [95% CI, 0.70 to 1.24]), or CC-115 (HR, 0.88 [95% CI, 0.41 to 1.88]). Simulations, together with the INSIGhT data and a collection of GBM data sets, allowed us to examine efficiencies and risks of clinical trial designs that leverage external control data. CONCLUSION The use of carefully matched external controls, to replace or augment the internal controls of INSIGhT, produced treatment effect estimates that were similar to previously published analyses. Single-arm trial designs and hybrid randomized designs incorporating propensity score–matched external control data evaluated treatment effects in the early-phase testing of experimental therapies in newly diagnosed GBM. The validity of this approach and risks of bias depended on the availability of comprehensive and accurate data on all potential confounders, in the absence of unmeasured confounding.
Hyaluronan Regulates Vascular Smooth Muscle Cell Osteogenic Differentiation and Vascular Calcification
Roy, Shrea, Kane, Jamie, Grigorieva, Irina, Roche-Dugmore, Dylan , Moore, Sacha , Steadman, Robert , Raby, Anne‐Catherine , Schurgers, Leon, Lutgens, Esther, Eringa, Etto C. , Vervloet, Marc , Fraser, Donald , Meran, Soma , Kane, Jamie , Schurgers, Leon J. , Kane, Jamie , Schurgers, Leon , Eringa, Etto C , Vervloet, Marc G , Fraser, Donald , Jakulj, Lily , Lutgens, Esther

Biomolecules | May 22, 2026 | Volume: 16 | Issue: 5 | Pages: 729

10.3390/biom16050729 | PMID 42194078 Get It

Vascular calcification is a strong predictor of cardiovascular mortality and lacks effective treatment. The transformation of vascular smooth muscle cells (VSMCs) into osteoblast-like phenotypes is a key driver of calcification. This study identifies a regulatory role for Hyaluronan (HA) in VSMC osteogenic differentiation and arterial calcification. Human aortic VSMCs stimulated with high phosphate and/or pro-inflammatory cytokines (IL6 and TGF-β1) exhibited increased RUNX2, alkaline phosphatase and osteopontin expression, along with reduced contractility and elevated calcium deposition. This corresponded with reduced HA deposition and downregulation of HA synthase enzymes (HAS1, HAS2), Hyaluronidase enzymes (Hyal1), and HA binding proteins (CD44, TSG-6), whilst HAS3 and versican were upregulated. Comparable alterations in HA and protein expression were observed in an in vivo model of arterial calcification using vitamin K-deficient warfarin-fed mice. Pharmacological inhibition of HA synthesis, enzyme-mediated HA degradation and siRNA/plasmid modulation of HAS isoenzymes demonstrated a possible functional link between HA regulation and VSMC osteogenic differentiation. This study establishes HA and its associated binding proteins as key regulators of arterial calcification, highlighting a novel pathway for potential therapeutic intervention.
Irreversible electroporation associated with improved overall survival vs standard of care for stage 3 pancreatic ductal adenocarcinoma
Martin, Robert C.G. , Bilimoria, Malcolm M., Narayanan, Govindarajan, Iannitti, David A. , Polanco, Patricio M., Cleary, S., Heithaus, Robert Evans , Welling, Theodore, Chan, Carlos H.F. , Chan, Carlos H F , White, Rebekah R. , Narayanan, Govindarajan, Kluger, Michael D. , Polanco, Patricio Marcelo , Hammill, Chet W. , Cleary, Sean P. , Welling, Theodore H.

No container title available | May 21, 2026 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.64898/2026.05.19.26353144 Get It

Abstract Background Emerging evidence suggests irreversible electroporation (IRE) with standard-of-care (SOC) chemotherapy may improve survival in patients with Stage 3 pancreatic ductal adenocarcinoma (PDAC) when compared to SOC alone. This study evaluates the overall survival (OS) and progression-free survival (PFS) of Stage 3 PDAC patients treated with SOC plus IRE with the NanoKnife System versus SOC alone. Methods This prospective, multicenter study included two cohorts from the DIRECT registry: an IRE cohort from sites offering IRE as part of clinical care, and a comparator SOC cohort of prospectively enrolled and contemporaneous retrospective patients. Enrollment spanned 08/05/2019 to 02/05/2023, with follow-up through at least 24 months, death, or loss to follow-up. Included were 137 patients (99 IRE; 38 SOC), aged ≥18 years with Stage 3 PDAC and no progression after three months of SOC therapy. Results Median (interquartile range) time from diagnosis to enrollment was 8 (6-10) months for IRE and 4 (3-6) for SOC (p<0.0001). Median OS and PSF from enrollment were 18 (95% confidence interval [CI]: 15-24) months and 9 (95% CI: 7-12) months for IRE, and 10 (95% CI: 8-14) months and 6 (5-8) months for SOC, respectively (p<0.0001 and p=0.009). Adverse events occurred in 80% (79/99) of IRE patients and 95% (36/38) of SOC patients; 29% (29/99) of the IRE cohort experiencing an IRE-related adverse event. Conclusions IRE was associated with improved OS versus SOC alone and may be an effective consolidative treatment for Stage 3 PDAC after three months of induction chemotherapy.
Outcomes associated with an inpatient addiction consult service: Systematic review and meta-analysis
Abraham, Tina E., Qadeer, A, Fareed, Areeba , Roberts, Daniel L. , Benkhadra, Khalid, Colbenson, Gretchen A. , Kole, Amy E., Coracides, Jamie J., Sharma, Umesh M., Choulet, Samuel R., Qadeer, Abdul , Qadeer, Abdul , Fareed, Areeba , Qadeer, Abdul , Meier, Madeline H. , Kole, Amy, Kirchoff, Robert W.

Sage Open Medicine | May 20, 2026 | Volume: 14 | Issue: No issue available | Pages: No page available

10.1177/20503121261453173 | PMID 42179704 Get It

Background Patients with substance use disorder (SUD) have high rates of hospitalization, readmission, and prolonged lengths of stay. Objectives To conduct a systematic review and meta-analysis of the impact of addiction consult services in the inpatient setting for patients with SUD. Methods Five databases were systematically searched from their earliest available records through January 2025. Two authors independently screened articles, extracted data, and assessed the quality of each study with the Newcastle-Ottawa Scale for observational studies and the Cochrane risk-of-bias tool for randomized clinical trials. Pooled odds ratios (ORs) with 95% CIs were calculated for dichotomous outcomes, and mean differences were calculated for continuous outcomes. Results The search retrieved 20 studies that met inclusion criteria. The intervention for all studies was an addiction medicine consult, but the definition of this consult varied. The meta-analysis did not detect statistically significant differences in hospital length of stay, hospital readmission, or emergency department visits at 1 year among patients who received the consult compared with those who did not; however, many of these outcomes were likely underpowered. However, addiction medicine consults significantly improved the odds of inpatient initiation of medication for SUD (OR, 7.30; 95% CI, 3.30-16.13; P <.001) and postdischarge SUD treatment linkage and adherence (OR, 3.31; 95% CI, 2.06-5.32; P <.001). Conclusion Inpatient addiction consult services are associated with increased inpatient initiation of medication for SUD treatment and postdischarge treatment linkage and adherence. No clear association was identified between the consult and readmissions, emergency department utilization, or length of stay.
Differentiating Upper Trunk Brachial Plexopathies From the Electrodiagnostic “Gray Zone” Extraforaminal Cervical Nerve Root Injuries With Brachial Plexus Ultrasound
Meiling, James B. , Pulos, Nicholas, Spinner, Robert J, Shin, Alexander Y, Meiling, James B , Pulos, Nicholas , Spinner, Robert J. , Shin, Alexander Y.

American Journal of Physical Medicine & Rehabilitation | May 20, 2026 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.1097/phm.0000000000003024 | PMID 42155977 Get It

Patients with traumatic brachial plexus injuries (TBPI) undergo clinical examination and electromyography (EMG) to characterize injury severity and localization. However, precise localization with EMG alone can be difficult when multiple injury sites are possible. Brachial plexus ultrasound (BPUS) allows direct visualization of the brachial plexus, a needed adjunct to EMG to reveal multiple sites of injury in TBPI. We summarize three cases of EMG-confirmed upper trunk TBPI which were clarified using BPUS to additionally involve electrically hidden injuries to the extraforaminal C5 and C6 nerve roots. BPUS demonstrated extensive scarring and focal enlargement of the upper trunk in each patient (all cross-sectional area [CSA] ≥24 mm 2 ). However, all patients also had C5 and C6 extraforaminal nerve root enlargement (all CSA ≥9 mm 2 and 12 mm 2 , respectively), revealing further neural involvement proximal to the upper trunk into the EMG “gray zone”– postganglionic, extraforaminal cervical nerve root injury which is clinically and electrodiagnostically indistinguishable from the plexus but anatomically and radiographically distinguishable on BPUS. Some EMG-identified upper trunk TBPI may have more proximal involvement of the contributing extraforaminal C5-6 nerve roots, an area electrically indistinguishable from an upper trunk TBPI without the assistance of advanced imaging.
Opportunistic CT Attenuation Biomarkers of Anemia Are Associated With Impaired Myocardial Flow Reserve and Cardiovascular Outcomes
Miller, Robert J.H. , Shanbhag, Aakash, Kwieciński, Jacek , Kavanagh, Paul, Ramirez, Giselle, Lemley, Mark, Kamagate, Assiata, Slipczuk, Leandro , Travin, Mark I. , Alexanderson, Erick, Carvajal-Juarez, Isabel, Packard, René R S, Einstein, Andrew J., Mason, Steve, Wopperer, Samuel, Rosamond, Thomas, DeKemp, Robert A, Buechel, Ronny R. , Berman, Daniel S., Dey, Damini, Carli, Marcelo F Di, Slomka, Piotr, Carvajal-Juarez, Isabel , Slipczuk, Leandro , Packard, Rene R S , Al-Mallah, Mouaz H , Buechel, Ronny R , Di Carli, Marcelo F , Slomka, Piotr J , Carvajal-Juarez, Isabel , Miller, Robert J H , Yi, Jirong , Kavanagh, Paul , Lemley, Mark , Alexanderson, Erick , Packard, René R. Sevag , Al‐Mallah, Mouaz H. , Einstein, Andrew Jeffrey , Acampa, Wanda , Knight, Stacey , Le, Viet T. , Mason, Steve, Wopperer, Samuel, Chareonthaitawee, Panithaya , deKemp, Robert A. , Berman, Daniel S. , Dey, Damini , Carli, Marcelo F. Di

No container title available | May 19, 2026 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.64898/2026.05.14.26353239 | PMID 42238410 Get It

ABSTRACT Background Anemia is an established marker of cardiovascular disease severity and risk which leads to elevations in resting myocardial blood flow (MBF) and impaired myocardial flow reserve (MFR) in patients without obstructive coronary artery disease (CAD). Anemia can potentially be detected opportunistically from blood pool density changes on computed tomography (CT) imaging. Objectives We evaluated relationships between chamber density measurements with hemoglobin, positron emission tomography (PET) findings, and cardiovascular events. Methods We included 33460 patients from 13 sites in the REFINE-PET who underwent PET and 24368 patients undergoing lung cancer screening chest CT. A deep learning model segmented cardiac chambers from CT images, then quantified chamber density. We evaluated the relationship between chamber density measures with resting MBF and MFR, as well as associations with death or myocardial infarction (MI). Results We included a total of 57,828 patients. A higher density in myocardium compared to left ventricle blood pool was associated with reduced MFR (adjusted odds ratio 3.02 per SD increase, 95% confidence interval[CI] 2.72 – 3.38) and an increased risk of death or MI in (adjusted hazard ratio[HR] 1.38 per SD increase, 95% CI 1.26-1.51). Having myocardial density higher than blood pool density was also associated with cardiovascular death in patients undergoing low-dose chest CT (adjusted HR 1.73, 95% CI 1.20-2.52). Conclusions In a large multimodality dataset, lower cardiac chamber density is associated with impaired MFR and independently associated with cardiovascular events. These biomarkers can be automatically extracted from CT to provide physiologic insights and potentially guide patient care. CONDENSED ABSTRACT Anemia is an important marker of cardiovascular disease severity and predictor of cardiovascular events. We utilized deep learning to measure cardiac chamber density on computed tomography imaging as a surrogate for anemia in 57,828 patients from two large multicenter studies. A higher density in myocardium compared to left ventricle blood pool was associated with reduced MFR and an increased risk of death or MI in patients undergoing positron emission tomography, and an increased risk of cardiovascular death in patients undergoing low-dose computed tomography. These biomarkers can provide additionally physiologic insights which could be used to guide patient care.