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Shen, Jiajian

0000-0003-0439-2075

Mayo Clinic

Department of Radiation Oncology, Mayo Clinic, Arizona, USA.

Citations 31

Investigation of beam delivery time for synchrotron-based proton pencil beam scanning system with novel scanning mode
Liang, Xiaoying , Liu, Chunbo , Shen, Jiajian , Bues, Martin , Dougherty, Jingjing M. , Parisi, Alessio , Shrestha, Deepak K. , Yaddanpudi, Sridhar, Beltran, Chris , Yaddanapudi, Sridhar , Furutani, Keith M. , Shen, Jiajian , Bues, Martin , Dougherty, Jingjing M , Parisi, Alessio , Beltran, Chris J , Liang, Xiaoying , Yaddanapudi, Sridhar , Li, Heng

Physics in Medicine & Biology | July 25, 2022 | Volume: 67 | Issue: 17 | Pages: 175001

10.1088/1361-6560/ac8410 Get It

Abstract Objective. To investigate synchrotron-based proton pencil beam scanning (PBS) beam delivery time (BDT) using novel continuous scanning mode. Approach. A BDT calculation model was developed for the Hitachi particle therapy system. The model was validated against the measured BDT of 36 representative clinical proton PBS plans with discrete spot scanning (DSS) in the current Hitachi proton therapy system. BDTs were calculated with the next generation using Mayo Clinic Florida system operating parameters for conventional DSS, and novel dose driven continuous scanning (DDCS). BDTs of DDCS with and without Break Spots were investigated. Main results. For DDCS without Break Spots, the use of Stop Ratio to control the transit dose largely reduced the beam intensity and consequently, severely prolonged the BDT. DDCS with Break Spots was able to maintain a sufficiently high beam intensity while controlling transit dose. In DDCS with Break Spots, tradeoffs were made between beam intensity and number of Break Spots. Therefore, BDT decreased with increased beam intensity but reached a plateau for beam intensity larger than 10 MU s −1 . Averaging over all clinical plans, BDT was reduced by 10% for DDCS with Break Spots compared to DSS. Significance. DDCS with Break Spots reduced BDT. DDCS has the potential to further reduce BDT under the ideal scenario which requests both stable beam intensity extraction and accurately modelling the transit dose. Further investigation is warranted.
Technical note: Evaluation and second check of a commercial Monte Carlo dose engine for small‐field apertures in pencil beam scanning proton therapy
Holmes, Jason , Shen, Jiajian , Shan, Jie , Patrick, Christopher L., Wong, William W. , Foote, Robert L. , Patel, Samir H. , Bues, Martin , Shen, Jiajian , Holmes, Jason M , Liu, Wei

Medical Physics | March 19, 2022 | Volume: 49 | Issue: 5 | Pages: 3497-3506

10.1002/mp.15604 Get It

Abstract Purpose To evaluate the accuracy of the RayStation Monte Carlo dose engine (RayStation MC) in modeling small‐field block apertures in proton pencil beam scanning. Furthermore, we evaluate the suitability of MCsquare as a second check for RayStation MC. Methods We have enhanced MCsquare to model block apertures. To test the accuracy of both RayStation MC and the newly enhanced MCsquare, we compare the dose predictions of each to in‐water dose measurements obtained using diode detectors and radiochromic film. Nine brass apertures with openings of 1, 2, 3, 4, and 5 cm and either 2 cm or 4 cm thickness were used in the irradiation of a water phantom. Two measurement setups were used, one with a range shifter and 119.7 MeV proton beam energy and the other with no range shifter and 147 MeV proton beam energy. To further test the validity of RayStation MC and MCsquare in modeling block apertures and to evaluate MCsquare as a second check tool, 10 small‐field (average target volume 8.3 cm 3 ) patient treatment plans were calculated by each dose engine followed by a statistical comparison. Results Comparing to the absolute dose measurements in water, RayStation MC differed by 1.2% ± 1.0% while MCsquare differed by −1.8% ± 3.7% in the plateau region of a pristine Bragg peak. Compared to the in‐water film measurements, RayStation MC and MCsquare both performed well with an average 2D‐3D gamma passing rate of 99.4% and 99.7% (3%/3 mm), respectively. A t ‐test comparing the agreement with the film measurements between RayStation MC and MCsquare suggested that the relative spatial dose distributions calculated by MCsquare and RayStation MC were statistically indistinguishable. Directly comparing the dose calculations between MCsquare and RayStation MC over 10 patients resulted in an average 3D‐3D gamma passing rates of 98.5% (3%/3 mm) and 94.1% (2%/2 mm), respectively. Conclusion The validity of RayStation MC algorithm for use with patient‐specific apertures has been expanded to include small apertures. MCsquare has been enhanced to model apertures and was found to be an adequate second check of RayStation MC in this scenario.
Building a precise machine-specific time structure of the spot and energy delivery model for a cyclotron-based proton therapy system
Zhao, Lewei , Zheng, Weili , Shen, Jiajian , Lee, Andrew , Yan, Di , Deraniyagala, Rohan, Stevens, Craig , Tang, Shikui, Ding, Xuanfeng , Shen, Jiajian , Liu, Gang , Li, Xiaoqiang

Physics in Medicine & Biology | December 14, 2021 | Volume: 67 | Issue: 1 | Pages: 01NT01

10.1088/1361-6560/ac431c Get It

Abstract Objective . We proposed an experimental approach to build a precise machine-specific beam delivery time (BDT) prediction and delivery sequence model for standard, volumetric, and layer repainting delivery based on a cyclotron accelerator system. Approach . Test fields and clinical treatment plans’ log files were used to experimentally derive three main beam delivery parameters that impacted BDT: energy layer switching time (ELST), spot switching time, and spot drill time. This derived machine-specific model includes standard, volumetric, and layer repainting delivery sequences. A total of 103 clinical treatment fields were used to validate the model. Main results . The study found that ELST is not stochastic in this specific machine. Instead, it is actually the data transmission time or energy selection time, whichever takes longer. The validation showed that the accuracy of each component of the BDT matches well between machine log files and the model’s prediction. The average total BDT was about (−0.74 ± 3.33)% difference compared to the actual treatment log files, which is improved from the current commercial proton therapy system’s prediction (67.22%±26.19%). Significance . An accurate BDT prediction and delivery sequence model was established for an cyclotron-based proton therapy system IBA ProteusPLUS ® . Most institutions could adopt this method to build a machine-specific model for their own proton system.
Technical Note: Long‐term monitoring of diode sensitivity degradation induced by proton irradiation
Younkin, James E. , Robertson, Daniel , Hu, Yanle , Morales, Danairis Hernandez, Shen, Jiajian , Ding, Xiaoning, Robertson, Daniel G, Bues, Martin , Shen, Jiajian , Liu, Wei

Medical Physics | October 7, 2021 | Volume: 48 | Issue: 11 | Pages: 6634-6641

10.1002/mp.15265 Get It

AbstractPurposeTo measure diode sensitivity degradation (DSD) induced by cumulative proton dose delivered to a commercial daily quality assurance (QA) device.MethodsAt our institution, six Daily QA 3 (DQA3, Sun Nuclear Corporation, Melbourne, FL, USA) devices have been used for daily proton pencil beam scanning QA in four proton gantry rooms over a span of 4 years. DQA3 diode counts were cross‐calibrated using a homogenous field with a known dose of 1 Gy. The DSD rate (ΔR%/100 Gy) was calculated using linear regression on time‐series plots of diode counts and an estimate of cumulative dose per year based on the cross‐calibration. The effect of DSD on daily QA spot position measurements was quantified by converting DSD to baseline spot position shift.ResultsThe average dose delivered to the four inner DQA3 diodes was 104 ± 5 Gy/year, and the rate of DSD was ‐5.1% ± 1.0/100 Gy with the exception of one DQA3 device that had a significantly higher rate of DSD (–12%/100 Gy). The R2s of the linear fit to time‐series plots were between 0.92 and 0.98. The DSD rates were not constant but decreases with accumulated doses. The four center diodes, which received 40% of the cumulative dose received by inner diodes, had a DSD rate of –7.2% ± 0.9/100 Gy. For our daily QA program, 1 year of DSD was equivalent to a 0.2 mm shift in spot position.ConclusionsThe DSD rate of DQA3 diodes determined by long‐term proton daily QA data was about –5%/100 Gy, which is more than 10 times greater than the reported DSD rate from photon irradiation. DQA3 diodes may be used for daily proton QA programs, provided that they are recalibrated at an appropriate frequency that should be determined specifically for different daily QA programs.
Technical Note: Clinical modeling and validation of breast tissue expander metallic ports in a commercial treatment planning system for proton therapy
Kang, Yixiu, Shen, Jiajian , Hu, Yanle , Ding, Xiaoning, Bues, Martin , Shen, Jiajian , Liu, Wei

Medical Physics | September 14, 2021 | Volume: 48 | Issue: 11 | Pages: 7512-7525

10.1002/mp.15225 Get It

AbstractPurposeTo validate breast tissue expander metallic port (MP) models in a commercial treatment planning system (TPS) in proton pencil beam scanning (PBS) treatments for breast cancer patients with breast tissue expanders.Methods and materialsThree types of MPs taken out of a Mentor CPX4, a Natrelle 133, and a PMT Integra breast tissue expanders and a 650 cc saline filled Mentor CPX4 expander were placed on top of acrylic slabs, and scanned using a Siemens Somatom Definition AS Open RT CT scanner. Structure templates for each of the MPs were designed within Eclipse TPS. The CT numbers for the metallic parts were overridden to reflect measured or calculated relative proton stopping powers (RPSPs). Mock targets were contoured in acrylic to represent postmastectomy chest‐wall radiation therapy (PMRT) targets. Plans with different beam incident angles were optimized using the Eclipse TPS to deliver uniform prescription dose to the target using Hitachi Probeat‐V PBS beams. Eclipse calculated doses and an in‐house Monte Carlo (MC) code calculated doses were compared to the measured Gafchromic EBT3 film doses in acrylic.ResultsTPS/MC and film dose comparison results showed that (1) 3%/2 mm/10% threshold Gamma pass rates were better than 90.8% in the acrylic target region for all plans; (2) comparing TPS and film doses for the individual beam plans in the MP dose shadow areas, the area with dose difference above 5% ([ΔA] 5%) ranged from 1.1 to 5.0 cm2, and the maximum dose difference ([ΔD] 0.01 cm2) ranged from 12.5% to 25.0%; (3) comparing MC and film doses for the individual beam plans in the MP dose shadow areas, the (ΔA) 5% varied from 1.1 to 2.9 cm2 and (ΔD) 0.01 cm2 varied from 8.5% to 24.2%; (4) for a plan composed of three individual beams treating through the Mentor CPX4 expander, the TPS (ΔA) 5% was less than 0.13 cm2, and the (ΔD) 0.01 cm2 was less than 6% in the MP dose shadow areas.ConclusionsIt is feasible to treat patients with tissue expanders using multiple PBS beams using a structure template with CT number overridden to represent the measured/calculated RPSP for MPs for PBS treatment planning. MC dose was more accurate than analytical dose in the areas with high dose gradient caused by the density heterogeneity of the breast tissue expander MPs.
Technical Note: Multiple energy extraction techniques for synchrotron‐based proton delivery systems may exacerbate motion interplay effects in lung cancer treatments
Younkin, James E. , Morales, Danairis Hernandez, Shen, Jiajian , Ding, Xiaoning, Stoker, J. , Yu, Nathan Y. , Daniels, T.B., Fatyga, M., Stoker, Joshua B., Daniels, Thomas B, Bues, Martin , Fatyga, Mirek, Schild, Steven E. , Shen, Jiajian , Sio, Terence T. , Liu, Wei

Medical Physics | June 26, 2021 | Volume: 48 | Issue: 9 | Pages: 4812-4823

10.1002/mp.15056 Get It

Abstract Purpose The multiple energy extraction (MEE) delivery technique for synchrotron‐based proton delivery systems reduces beam delivery time by decelerating the beam multiple times during one accelerator spill, but this might cause additional plan quality degradation due to intrafractional motion. We seek to determine whether MEE causes significantly different plan quality degradation compared to single energy extraction (SEE) for lung cancer treatments due to the interplay effect. Methods Ten lung cancer patients treated with IMPT at our institution were nonrandomly sampled based on a representative range of tumor motion amplitudes, tumor volumes, and respiratory periods. Dose‐volume histogram (DVH) indices from single‐fraction SEE and MEE four‐dimensional (4D) dynamic dose distributions were compared using the Wilcoxon signed‐rank test. Distributions of monitor units (MU) to breathing phases were investigated for features associated with plan quality degradation. SEE and MEE DVH indices were compared in fractionated deliveries of the worst‐case patient treatment scenario to evaluate the impact of fractionation. Results There were no clinically significant differences in target mean dose, target dose conformity, or dose to organs‐at‐risk between SEE and MEE in single‐fraction delivery. Three patients had significantly worse dose homogeneity with MEE compared to SEE (single‐fraction mean D 5% ‐D 95% increased by up to 9.6% of prescription dose), and plots of MU distribution to breathing phases showed synchronization patterns with MEE but not SEE. However, after 30 fractions the patient in the worst‐case scenario had clinically acceptable target dose homogeneity and coverage with MEE (mean D 5% –D 95% increased by 1% compared to SEE). Conclusions For some patients with breathing periods close to the mean spill duration, MEE resulted in significantly worse single‐fraction target dose homogeneity compared to SEE due to the interplay effect. However, this was mitigated by fractionation, and target dose homogeneity and coverage were clinically acceptable after 30 fractions with MEE.
A method for quantitative evaluations of scanning‐proton dose distributions
Allred, Bryce C., Shan, Jie , Robertson, Daniel , DeWees, T.A. , Shen, Jiajian , Stoker, Joshua B., Robertson, Daniel G, DeWees, Todd A , Shen, Jiajian , Shan, Jie, Liu, Wei

Journal of Applied Clinical Medical Physics | March 29, 2021 | Volume: 22 | Issue: 4 | Pages: 193-201

10.1002/acm2.13226 Get It

AbstractPurposePatient‐Specific Quality Assurance (PSQA) measurement analysis depends on generating metrics representative of calculation and measurement agreement. Considering the heightened capability of discrete spot scanning protons to modulate individual dose voxels, a dose plane comparison approach that maintained all of the capabilities of the well‐established γ test, but that also provided a more intuitive error parameterization, was desired.MethodsAnalysis was performed for 300 dose planes compared by searching all calculated points within a fixed radius around each measured pixel to determine the dose deviation. Dose plane agreement is reported as the dose difference minimum (DDM) within an empirically established search radius: ΔDmin(r). This per‐pixel metric is aggregated into a histogram binned by dose deviation. Search‐radius criteria were based on a weighted‐beamlet 3σ spatial deviation from imaging isocenter. Equipment setup error was mitigated during analysis using tracked image registration, ensuring beamlet deviations to be the dominant source of spatial error. The percentage of comparison points with <3% dose difference determined pass rate.ResultsThe mean beamlet radial deviation was 0.38mm from x‐ray isocenter, with a standard deviation of 0.19mm, such that 99.9% of relevant pencil beams were within 1 mm of nominal. The dose‐plane comparison data showed no change in passing rate between a 3%/1mm ΔDmin(r) analysis (97.6 +/‐ 3.6%) and a 3%/2mm γ test (97.7 +/‐ 3.2%).ConclusionsPSQA dose‐comparison agreements corresponding to a search radius outside of machine performance limits are likely false positives. However, the elliptical shape of the γ test is too dose‐restrictive with a spatial‐error threshold set at 1 mm. This work introduces a cylindrical search shape, proposed herein as more relevant to plan quality, as part of the new DDM planar‐dose comparison algorithm. DDM accepts all pixels within a given dose threshold inside the search radius, and carries forward plan‐quality metrics in a straightforward manner for evaluation.
Feasibility of using megavoltage computed tomography to reduce proton range uncertainty: A simulation study
Hu, Yanle , Ding, Xiaoning, Shen, Jiajian , Liu, Wei , Kang, Yixiu, Yu, Lifeng , Bues, Martin , Liu, Wei , Shen, Jiajian , Leng, Shuai , Yu, Lifeng

Journal of Applied Clinical Medical Physics | February 20, 2021 | Volume: 22 | Issue: 3 | Pages: 131-140

10.1002/acm2.13191 Get It

AbstractPurposeTo demonstrate that variation in chemical composition has a negligible effect on the mapping curve from relative electron density (RED) to proton stopping power ratio (SPR), and to establish the theoretical framework of using Megavoltage (MV) computed tomography (CT), instead of kilovoltage (kV) dual energy CT, to accurately estimate proton SPR.MethodsA simulation study was performed to evaluate the effect of chemical composition variation on kVCT number and proton SPR. The simulation study involved both reference and simulated human tissues. The reference human tissues, together with their physical densities and chemical compositions, came from the ICRP publication 23. The simulated human tissues were created from the reference human tissues assuming that elemental percentage weight followed a Gaussian distribution. For all tissues, kVCT number and proton SPR were obtained through (a) theoretical calculation from tissue’s physical density and chemical composition which served as the ground truth, and (b) estimation from RED using the calibration curves established from the stoichiometric method. Deviations of the estimated values from the calculated values were quantified as errors in using RED to estimate kVCT number and proton SPR.ResultsGiven a chemical composition variation of 5% (1σ) of the nominal percentage weights, the total estimation error of using RED to estimate kVCT number was 0.34%, 0.62%, and 0.77% and the total estimation error of using RED to estimate proton SPR was 0.30%, 0.22%, and 0.16% for fat tissues, non‐fat soft tissues and bone tissues, respectively.ConclusionChemical composition had a negligible effect on the method of using RED to determine proton SPR. RED itself is sufficient to accurately determine proton SPR. MVCT number maintains a superb linear relationship with RED because it is highly dominated by Compton scattering. Therefore, MVCT has great potential in reducing the proton range uncertainty.
Technical Note: Integrating an open source Monte Carlo code “MCsquare” for clinical use in intensity‐modulated proton therapy
Younkin, James E. , Souris, Kevin , Huang, Sheng , Augustine, Kurt E., Fatyga, M., Ding, Xiaoning, Cohilis, Marie , Shan, Jie , Stoker, J. , Shen, Jiajian , Augustine, Kurt, Fatyga, Mirek, Bues, Martin , Stoker, Joshua, Shen, Jiajian , Deng, Wei, Lin, Liyong , Liu, Wei

Medical Physics | March 10, 2020 | Volume: 47 | Issue: 6 | Pages: 2558-2574

10.1002/mp.14125 Get It

PurposeTo commission an open source Monte Carlo (MC) dose engine, “MCsquare” for a synchrotron‐based proton machine, integrate it into our in‐house C++‐based I/O user interface and our web‐based software platform, expand its functionalities, and improve calculation efficiency for intensity‐modulated proton therapy (IMPT).MethodsWe commissioned MCsquare using a double Gaussian beam model based on in‐air lateral profiles, integrated depth dose of 97 beam energies, and measurements of various spread‐out Bragg peaks (SOBPs). Then we integrated MCsquare into our C++‐based dose calculation code and web‐based second check platform “DOSeCHECK.” We validated the commissioned MCsquare based on 12 different patient geometries and compared the dose calculation with a well‐benchmarked GPU‐accelerated MC (gMC) dose engine. We further improved the MCsquare efficiency by employing the computed tomography (CT) resampling approach. We also expanded its functionality by adding a linear energy transfer (LET)‐related model‐dependent biological dose calculation.ResultsDifferences between MCsquare calculations and SOBP measurements were <2.5% (<1.5% for ~85% of measurements) in water. The dose distributions calculated using MCsquare agreed well with the results calculated using gMC in patient geometries. The average 3D gamma analysis (2%/2 mm) passing rates comparing MCsquare and gMC calculations in the 12 patient geometries were 98.0 ± 1.0%. The computation time to calculate one IMPT plan in patients’ geometries using an inexpensive CPU workstation (Intel Xeon E5‐2680 2.50 GHz) was 2.3 ± 1.8 min after the variable resolution technique was adopted. All calculations except for one craniospinal patient were finished within 3.5 min.ConclusionsMCsquare was successfully commissioned for a synchrotron‐based proton beam therapy delivery system and integrated into our web‐based second check platform. After adopting CT resampling and implementing LET model‐dependent biological dose calculation capabilities, MCsquare will be sufficiently efficient and powerful to achieve Monte Carlo‐based and LET‐guided robust optimization in IMPT, which will be done in the future studies.
Hybrid 3D analytical linear energy transfer calculation algorithm based on precalculated data from Monte Carlo simulations
Ding, Xiaoning, Younkin, James E. , Shen, Jiajian , Patel, Samir H. , Bues, Martin , Schild, Steven E. , Shen, Jiajian , Deng, Wei, Liu, Wei

Medical Physics | November 23, 2019 | Volume: 47 | Issue: 2 | Pages: 745-752

10.1002/mp.13934 Get It

PurposeThe dose‐averaged linear energy transfer (LETd) for intensity‐modulated proton therapy (IMPT) calculated by one‐dimensional (1D) analytical models deviates from more accurate but time‐consuming Monte Carlo (MC) simulations. We developed a fast hybrid three‐dimensional (3D) analytical LETd calculation that is more accurate than 1D analytical model.MethodsWe used the Geant4 MC code to generate 3D LETd distributions of monoenergetic proton beams in water for all energies and used a customized error function to fit the LETd lateral profiles at various depths to the MC simulation. The 3D LETd calculation kernel was a lookup table of these fitted coefficients, and LETd was determined directly from spot energies and voxel coordinates during analytical dose calculations. We validated our new method by comparing the calculated LETd distributions to MC results using 3D Gamma index analysis with 3%/2 mm criteria in 12 patient geometries. The significance of the improvement in Gamma index analysis passing rates over the 1D analytical model was determined using the Wilcoxon rank‐sum test.ResultsThe passing rate of 3D Gamma analysis comparing LETd distributions from the hybrid 3D method and the 1D method to MC simulations was significantly improved from 94.0% ± 2.5% to 98.0% ± 1.0% (P = 0.0003). The typical time to calculate dose and LETd simultaneously using an Intel Xeon E5‐2680 2.50 GHz workstation was approximately 2.5 min.ConclusionsOur new method significantly improved the LETd calculation accuracy compared to the 1D method while maintaining significantly shorter calculation time even comparing with the GPU‐based fast MC code.