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720 citation(s) found for "Núñez, Gabriel".

Achieving Expert-Level Clinical Infection Detection with LLMs from Clinical Documents: Validation in Complex Patient Cases with Cirrhosis
Yu, Yufei , Ford, James, Kim, Eileen , Patel, Avi, Loomba, Rohit, Malhotra, Atul, Nemati, Shamim, Ahn, Joseph C, Ford, James Stephen , Wardi, Gabriel , Malhotra, Atul , Nemati, Shamim

No container title available | January 15, 2026 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.64898/2026.01.13.26344046 | PMID 41646769 Get It

ABSTRACT Background Systemic infections are a leading cause of hospitalization and death among patients with cirrhosis. Timely and accurate infection identification is essential for both clinical care and the development of predictive models. However, existing methods such as ICD-10 coding are unreliable, and manual chart review is resource-intensive and difficult to scale. This study aimed to develop and validate an automated large language model (LLM)-based approach for infection classification and subtyping in patients with cirrhosis presenting to the emergency department (ED). Method We developed INFEHR (INfection identification and subtyping using Free-text EHR analysis), an LLM-powered pipeline utilizing Claude 3.5 Sonnet to analyze clinical notes from the first 72 hours of admission. Model outputs were compared against a physician-adjudicated gold standard in a cohort of 1,000 encounters from patients with cirrhosis who presented to the ED. Performance was benchmarked against ICD-10 code–based labeling and CDC Adult Sepsis Event criteria. Results INFEHR achieved 94.7% overall accuracy, with 99.5% sensitivity and 92.8% positive predictive value for identifying infection presence, outperforming ICD-10–based classification across all metrics ( p < 0.0001). The model also demonstrated strong performance in classifying pathogen type and infection site. This pipeline processed notes within seconds, offering improvements in efficiency and scalability over manual review. Conclusion INFEHR offers a scalable, reproducible, and accurate method for infection phenotyping in cirrhosis. By overcoming limitations of traditional coding and manual review, it supports high-throughput infection surveillance, improves cohort construction for clinical research, and enables future integration into real-time decision-support tools in hepatology.
A State Blueprint to Equip Schools With a Uniform Overdose Response Strategy
Geyer, Holly L. , Renszel, Krystal, Kirkilas, Gary, Johnson, Catharina, Moffit, Randy, Kurtenbach, Mike, Geyer, Holly, Renszel, Krystal

Pediatrics | January 14, 2026 | Volume: 157 | Issue: 2 | Pages: No page available

10.1542/peds.2025-072575 | PMID 41529810 Get It

With most states lacking comprehensive legislation addressing overdose preparedness in schools, there is an urgent necessity for prompt and effective solutions that accommodate existing resource constraints. Arizona, the primary entry point for over 55% of US fentanyl trafficking, responded to this critical public health challenge by initiating the nation’s first unfunded grassroots collaboration between community and government sectors to enhance statewide school overdose prevention and preparedness. The School Training, Overdose Preparedness and Intelligence Task force (STOP-IT) included more than 60 volunteers from the health care, legal, education, local government and behavioral health fields and worked collaboratively with the Arizona Department of Education to develop a response. Within 6 months of inception, STOP-IT conducted a comprehensive school survey to identify barriers to naloxone accessibility, created evidence-based school policies, established a sustainable and complimentary naloxone supply chain for schools with an ordering platform, and implemented a statewide naloxone distribution plan. The amassed resources were organized into a Fentanyl and Overdose Response Toolkit, widely disseminated to more than 2000 public, private, and charter schools. Moreover, STOP-IT launched both a local and national public information campaign to effectively raise awareness about the opioid crisis in schools. Using various media channels such as webinars, podcasts, media broadcasts, newsletters, and peer-reviewed publications, the campaign successfully amplified its message and enhanced community engagement. The STOP-IT initiative emerged as an innovative collaboration between government and community leaders, united in their mission to combat the growing opioid crisis in schools.
Neoadjuvant immune checkpoint inhibitors (ICIs) for localized dMMR/MSI-h gastroesophageal cancers (GEC): A systematic review with meta-analysis.
Schwengber, Wallace Klein , Silva, Luís Felipe Leite da, Tumelero, Milena, Lenz, Gabriel , Fouchardiere, C. de la, Bekaii-Saab, Tanios S., Pereira, Rafael Alvim , Silva, Luís Felipe Leite da, Tumelero, Milena , Michelon, Isabella , Chung, Kevin, Fouchardière, Christelle de la , Bekaii‐Saab, Tanios , Sonbol, Mohamad Bassam

Journal of Clinical Oncology | January 12, 2026 | Volume: 44 | Issue: 2_suppl | Pages: 373-373

10.1200/jco.2026.44.2_suppl.373 Get It

373 Background: Recent studies have demonstrated encouraging outcomes with neoadjuvant ICIs in pts with localized deficient mismatch repair (dMMR) and/or microsatellite instability-high (MSI-H) GEC, prompting discussions around the feasibility of nonoperative management (NOM). However, current evidence is largely from phase 1 and 2 clinical trials with limited sample sizes. Thus, the efficacy and safety of neoadjuvant ICI in this pt population remain subject to ongoing debate. Methods: We conducted a systematic review and meta-analysis of prospective and retrospective studies evaluating neoadjuvant ICIs in pts with localized dMMR/MSI-H GEC according to the PRISMA guidelines. The primary outcomes were pathological complete response (pCR) and complete clinical response (cCR) rates. cCR was defined as no evidence of residual disease on tumor-specific imaging and on endoscopy with biopsy. Secondary outcomes included major pathologic response (MPR) rates and the incidence of grade 3–4 immune-related adverse events (irAEs). Proportions with 95% confidence intervals (CI) were used to pool event rates for occurrence of cCR, pCR, MPR and grade 3-4 irAEs. The DerSimonian and Laird random-effects model was used. NOM was assessed as part of the qualitative analysis. Results: 20 studies comprising 396 pts treated with neoadjuvant ICIs were included. Three studies utilized double ICI blockade (PD-1/ PD-L1 inhibitor plus CTLA-4 inhibitor), while the remaining studies primarily utilized monotherapy with a PD-1 inhibitor, with or without chemotherapy. Overall, 320 (81.0%) underwent surgical resection. The pooled pCR rate was 41.6% (95% CI, 33.1%–50.8%), cCR 63.8% (95% CI, 45.6%–78.8%), and MPR 64.2% (95% CI, 49.1%–76.9%). The pooled incidence of grade 3–4 irAEs was 5.1% (95% CI, 0.6%–12.2%). Subgroup analysis showed higher pCR with ≥3 months versus <3 months of ICI (50.2% [95% CI 42.2–58.3] vs 28.4% [18.9–40.2]; χ²=8.69, p=0.003). Forty-four pts were managed with NOM, two experienced early local regrowth over median follow-up ranging from 11.5 to 28 months. Conclusions: Neoadjuvant ICI therapy appears to be a safe and effective therapeutic strategy for pts with localized dMMR/MSI-H GEC. Neoadjuvant ICI exposure for ≥3 months seems to yield higher pCR rates than <3 months. The high and prolonged cCR rates support the nonoperative strategy in selected patients with dMMR/MSI-H GEC.
Diagnostic AI model deployment in neurosurgery: lessons learned
Bernstein, Ross, Caron, Gabriel , Shin, Jimin, Zamora, Reynaldo, Ahn, Edward S., Bookland, Markus J. , Hersh, David S. , Martin, Jonathan E. , Ahn, Edward S.

Journal of Neurosurgery: Pediatrics | January 8, 2026 | Volume: 37 | Issue: 3 | Pages: 262-268

10.3171/2025.9.peds25115 | PMID 41569781 Get It

Effects of Intradural Extension of Extracranial Cervical Artery Dissection on Outcomes: A Secondary Analysis From the STOP ‐ CAD Study
Metanis, Issa , Shu, Liqi , Akpokiere, Favour , Jubran, Hamza , Mandel, Daniel , Nolte, Christian H. , Grory, Brian Mac , Frontera, Jennifer , Khan, Muhib, Rothstein, Aaron , Marto, João Pedro, Zedde, Marialuisa, Poppe, AY, Jubeh, Tamer , AlMajali, Mohammad, Shalabi, Fatma , Henninger, Nils , Rosa, Sara , Khazaal, Ossama , Kaufman, Josefine E., Traenka, Christopher , Bakradze, Ekaterina , Zubair, Adeel , Sousa, João André, Mantovani, Gabriel Paulo , Omran, Setareh Salehi , Elnazeir, Marwa , Sousa, Diana Aguiar de , Yaghi, Shadi, Sousa, João André , Mandel, Daniel M , Frontera, Jennifer , Henninger, Nils , Heldner, Mirjam R , Kaufman, Josefin E , Bakradze, Ekaterina , Zubair, Adeel , Ranasinghe, Tamra , Sousa, Joao Andre , Salehi Omran, Setareh , Elnazeir, Marwa , Yaghi, Shadi , Keser, Zafer , Aguiar de Sousa, Diana , Rosa, Sara , Metanis, Issa , Nolte, Christian H , Mac Grory, Brian , Siegler, James E. , Engelter, Stefan T. , Khan, Muhib , Schwartzmann, Yoel , Zedde, Marialuisa , Keser, Zafer , Antonenko, Kateryna , Heldner, Mirjam R. , Kaufmann, Josefin E. , Ranasinghe, Tamra , Simpkins, Alexis N. , Sargento‐Freitas, João , Yaghi, Shadi , Leker, Ronen R

Annals of Neurology | January 8, 2026 | Volume: 99 | Issue: 5 | Pages: 1189-1197

10.1002/ana.78151 | PMID 41503730 Get It

Objective Cervical artery dissection (CeAD) may be limited to the extracranial extradural space or extend to the intradural space. Intradural extension can potentially increase the risk of stroke and subarachnoid hemorrhage. However, the factors associated with intradural extension and its impact on clinical outcome remain unclear. Methods This was a secondary analysis of the STOP‐CAD observational, multi‐center study. Patients with CeAD and intradural extension (CeADid) were compared with those with pure CeAD extradural dissections (CeADed) using multiple regression analyses. Results Of 4,023 patients with CeAD, 534 (13.3%) had CeADid. In comparison to patients with CeADed, those with CeADid more often had clinical overt stroke or transient ischemic attack (TIA) at presentation, acute infarcts on imaging, a vertebral artery affected, and severe stenosis of the involved vessel ( p < 0.001 for all). In contrast, carotid involvement and complete occlusions were more frequent in patients with CeADed ( p < 0.001 for both). CeADid was associated with a shift in the distribution of scores on the modified Rankin Scale (mRS) toward worse functional outcome (odds ratio [OR] = 0.76, 95% confidence interval [CI] = 0.62–0.92) but the odds for favorable outcomes (mRS = 0–2) did not differ between the groups after appropriate adjustments on multivariate analysis. CeADid was independently associated with higher mortality at 180 days on multivariate analysis (adjusted OR = 2.84, 95% CI = 1.50–5.38). Interpretation CeADid is associated with more severe clinical presentation, a shift toward less favorable outcomes, and higher mortality rates. These findings suggest that CeADid may represent a high‐risk type of CeAD. ANN NEUROL 2026;99:1189–1197
OCT-Based Differentiation of First Acute Optic Neuritis
Pakeerathan, Thivya , Davis, James , Sotirchos, Elias S. , Said, Yana , Havla, Joachim , Ringelstein, Marius, Aktas, Orhan, Weise, Margit, Gernert, Jonathan A. , Bsteh, Gabriel , Rommer, Paulus , Pröbstel, Anne-Katrin, Kulsvehagen, Laila , Pretzsch, Roxanne , Schoenholzer, Kean , Padungkiatsagul, Tanyatuth , Moss, Heather E. , Navarro, Sylvia E. Villarreal , Herwerth, Marina , Graure, Madalina, Kana, Veronika , Stiebel-Kalish, Hadas, Zlatkin, Rita , Arnold, Anthony C. , Bonelli, Laura , Stellmann, Jan-Patrick, Stolowy, Natacha , Schneider-Gold, Christiane, Kümpfel, Tania, Philipp, A, Pittock, S., Ayzenberg, I., Henderson, Amanda D , Sotirchos, Elias S , Said, Yana , Havla, Joachim , Ringelstein, Marius , Aktas, Orhan , Gernert, Jonathan A , Kornek, Barbara , Bsteh, Gabriel , Rommer, Paulus S , Krajnc, Nik , Pröbstel, Anne-Katrin , Papadopoulou, Athina , Kulsvehagen, Laila , Pretzsch, Roxanne , Schoenholzer, Kean , Padungkiatsagul, Tanyatuth , Moss, Heather E , Villarreal Navarro, Sylvia E , Herwerth, Marina , Graure, Madalina , Kana, Veronika , Stiebel-Kalish, Hadas , Arnold, Anthony C , Bonelli, Laura , Stellmann, Jan-Patrick , Stolowy, Natacha , Schwake, Carolin , Schneider-Gold, Christiane , Kuempfel, Tania , Albrecht, Philipp , Rattanathamsakul, Natthapon , Pittock, S J , Flanagan, E P , Carta, Sara , Mariotto, Sara , Gold, Ralf , Chen, John J , Ayzenberg, Ilya , Henderson, Amanda D. , Ringelstein, Marius , Aktaş, Orhan , Stiebel‐Kalish, Hadas , Kümpfel, Tania , Rattanathamsakul, Natthapon , Pittock, Sean J. , Flanagan, Eoin P. , Carta, Sara , Mariotto, Sara , Chen, John J. , Ayzenberg, Ilya

Neurology Neuroimmunology & Neuroinflammation | January 7, 2026 | Volume: 13 | Issue: 2 | Pages: No page available

10.1212/nxi.0000000000200531 | PMID 41499724 Get It

Moderating Effects of Endurance on Gait Speed Associations With Incident Mild Cognitive Impairment and Dementia
Myatt, Glen D., Sylvester, Hunter C, Griswold, Michael , Knopman, David, Windham, B Gwen, Gottesman, Rebecca F. , Gabriel, Kelley Pettee , Sullivan, Kevin , Windham, B. Gwen

Innovation in Aging | January 3, 2026 | Volume: 9 | Issue: Supplement_2 | Pages: No page available

10.1093/geroni/igaf122.1079 Get It

Abstract Although slower gait speed is associated with cognitive impairment, endurance may be more predictive in older adults with faster gait speed. We examined moderating effects of endurance on the relationship of gait speed with incident mild cognitive impairment (MCI) or dementia in cognitively normal ARIC participants (n = 2242, mean age=78.6 + 4.3, 58% female, 19% Black). At the sixth exam, endurance was assessed as distance walked at a fast pace (Two Minute Walk, 2MW); usual 4-meter gait speed was also assessed. Cognitive status was adjudicated during the 6th-9th exams (mean follow-up 5.1 years). Multinomial logistic regression models with a 2MW-x-gait speed interaction term estimated relative risk ratios (RRR) of MCI and dementia relative to normal cognition per SD higher gait speed or 2MW distance, adjusting for demographic and cardiovascular factors. Results used representative continuous gait speed and continuous 2MW distance values. Longer 2MW distance was associated with lower risk of MCI and dementia at gait speed &lt;1m/s [e.g. gait speed=0.8: MCI RRR=0.59, 95%CI(0.42, 0.83); dementia RRR=0.29, (0.13, 0.63)] and with dementia at gait speed&gt;1m/s [gait speed=1.2: RRR=0.28, (0.09, 0.81)], but not with MCI (RRR=0.85, (0.57, 1.26)]. Conversely, faster gait speed was associated with lower risk of MCI at low 2MW [100 m; RRR=0.84, (0.74, 0.94)], but was attenuated at high 2MW (150 m; RRR=0.91, (0.84, 1.00)]. A 2MW-x-gait speed interaction term was supported (p = 0.04), primarily driven by differential MCI associations. Combining endurance and gait speed may be especially helpful in identifying cognitively normal older adults at risk for impending early-stage cognitive impairment.
Endurance and Gait Speed Associations with Incident Dementia in Older Adults: The ARIC Study
Kenney, Jamesia, Sylvester, Hunter C, Griswold, Michael , Gottesman, Rebecca, Knopman, David, Windham, B Gwen, Kenney, BS Jamesia, Gottesman, Rebecca, Gabriel, Kelley Pettee , Sullivan, Kevin , Windham, B. Gwen

Innovation in Aging | January 3, 2026 | Volume: 9 | Issue: Supplement_2 | Pages: No page available

10.1093/geroni/igaf122.2904 Get It

Abstract Faster gait speed and better endurance have been cross-sectionally and jointly associated with a lower likelihood of dementia. However, gait speed associations plateau above 1m/s, suggesting gait speed may be less predictive at near normal speeds. This study examined prospective associations of gait speed, endurance, and moderating effects of endurance on gait speed associations with incident dementia among ARIC participants without dementia at Visit 6 (2016-2017) who completed assessments of endurance ( 2- Minute Walk (2MW), meters) and usual-pace 4-meter gait speed (m/s) (n = 2767, mean age 78+/- 4.3 years, 43% male, 18% Black). Dementia was adjudicated using neuropsychological tests, functional assessments, informant interviews, and medical/vital record surveillance over a median of 3.3 years follow-up. Cox regression models estimated the hazard ratio (HR, 95% CI) for dementia, incorporating gait speed, 2MW, gait speed-by-2MW interaction, demographic, and cardiovascular factors. In separate models, each standard deviation higher 2MW [HR = 0.62, (0.50,0.76)] and faster gait speed [HR = 0.63, (0.50,0.81)] were associated with lower incident dementia risk. However, when jointly adjusting for 2MW and gait speed, higher 2MW was associated with a 32% lower incident dementia risk [HR = 0.68,(0.51, 0.90)], but faster gait speed was not statistically associated with incident dementia [HR = 0.85, (0.62,1.16)]. Moderating effects were not supported (gait speed-x-2MW interaction, p = 0.14). Although both endurance and gait speed predict dementia, endurance may be more informative across the gait speed spectrum, whereas gait speed may be more feasible for clinical settings. Longer follow-up and more dementia events may better inform differential utilities of gait speed and endurance measures.
ercc6 deficient zebrafish exhibit UV and metronidazole sensitivity, increased oxygen consumption, and impaired hair cell mechanoelectrical transduction which can be restored by the superoxide dismutase mimetic MnTBAP
Herrera, Gabriel A Hernandez, Dugdale, Joseph , Wallace, Jasmine G , Cotter, Ryan P. , Jolliffe, Alyssa M. , Clark, Karl J. , Schimmenti, Lisa A. , Hernandez-Herrera, Gabriel A. , Hernandez Herrera, Gabriel A , Dugdale, Joseph A , Clark, Karl J , Schimmenti, Lisa A , Cotter, Ryan P

Human Molecular Genetics | December 30, 2025 | Volume: 35 | Issue: 4 | Pages: No page available

10.1093/hmg/ddaf203 | PMID 41527836 Get It

Abstract Cockayne Syndrome is an ultra-rare premature aging condition associated with UV sensitivity, neurocognitive decline, retinopathy, metronidazole-induced lethality, and sensorineural hearing loss. In 70% of affected patients, bi-allelic pathogenic variants in ERCC6 are identified. Although the role of ERCC6 in DNA damage repair has been studied, little is known about the mechanism for defective ERCC6 function in clinical findings, particularly hearing loss. To identify the mechanism of disease caused by pathogenic variants in ERCC6, we developed a zebrafish (Danio rerio) ercc6 loss of function model. We assessed survival after UV and metronidazole exposure, measured basal respiration rates, and evaluated mechanoelectrical transduction function and counts of lateral line hair cells. We found that UV exposure significantly reduces ercc6−/− larval viability. Metronidazole treatment results in complete lethality; wildtype controls show nearly complete survival. ercc6−/− embryos have significantly increased oxygen consumption, suggesting abnormal mitochondrial function. Phalloidin staining of lateral line hair cells with and without UV treatment shows no difference in hair cell counts per neuromast between treatment groups. Mechanoelectrical transduction function after UV exposure, measured by FM1–43 uptake, is reduced. Metronidazole lethality is reduced, oxygen consumption rates are restored, and mechanoelectrical transduction function is preserved by treatment with Mn(III)tetrakis(4-benzoic acid)porphyrin Chloride (MnTBAP), a superoxide dismutase mimetic. We propose that defective mitochondrial function and increased reactive oxygen species levels provide a mechanism for hair cell dysfunction in this model of Cockayne Syndrome. These results provide a foundation for further experiments to explore disease mechanisms and treatment modalities for this premature aging condition.
Sex Differences in Neuropsychiatric Symptoms Associated with Agitation in Frontotemporal Lobar Degeneration
Sakran, Celine N., Dimal, Nico Paulo, Cortez, Kasey, Heuer, Hilary W. , Forsberg, Leah K. , Barmada, Sami J. , Clark, David G., Darby, Ryan, Dickerson, Brad C., Domoto‐Reilly, Kimiko, Galasko, Douglas R., Geschwind, Daniel H., Ghoshal, Nupur , Graff‐Radford, Neill R., Grant, Ian , Irwin, David J., Honig, Lawrence S., Kantarci, Kejal, Litvan, Irene, Mackenzie, Ian R. , Masdeu, Joseph C. , MENDEZ, M, Onyike, Chiadi, Pascual, Belén , Pressman, Peter , Ramos, Eilana, Rogalskı, Emily , Boeve, Brad F, Boxer, Adam L., Rosen, Howard J., Tartaglia, Carmela M., Pascual, Belen , Barmada, Sami , Vargas‐González, Juan‐Camilo , Dimal, Nico , Appleby, Brian S. , Bozoki, Andrea C , Clark, David G., Cobigo, Yann , Dickerson, Brad C., Domoto‐Reilly, Kimiko , Galasko, Douglas R., Geschwind, Daniel H. , Graff‐Radford, Neill R. , Irwin, David J. , Hsiung, Ging‐Yuek Robin , Honig, Lawrence S. , Kantarci, Kejal , Léger, Gabriel C. , Litvan, Irene , Masdeu, Joseph C , Mendez, Mario F. , Ramos, Eliana Marisa , Roberson, Erik D. , Boxer, Adam L. , Rosen, Howard J.

Alzheimer's & Dementia | December 25, 2025 | Volume: 21 | Issue: S3 | Pages: No page available

10.1002/alz70857_103036 Get It

Abstract Background Agitation is a clinically significant symptom contributing to behavioral and psychological symptoms of dementia (BPSD) but is poorly understood across the different syndromes related to Frontotemporal Lobar Degeneration (FTLD). This study investigates sex differences in agitation across FTLD‐related syndromes and its relationship to various neuropsychiatric symptoms (NPS). Method We analyzed data from 1,654 participants (916 males, 738 females; average ages 65.8 and 65.9, respectively) from the National Alzheimer's Coordinating Center (NACC) and ARTFL‐LEFFTDS Longitudinal Frontotemporal Lobar Degeneration (ALLFTD) study with a FTLD‐related syndrome: behavioral variant FTD (bvFTD), Primary Progressive Aphasia (non‐fluent variant (nfvPPA), semantic variant (svPPA)), Corticobasal syndrome (CBS) and Progressive Supranuclear Palsy (PSP). Participants’ symptoms were assessed using the Neuropsychiatric Inventory (NPI). Prevalence ratios and odds ratios were computed to assess the likelihood of NPS comorbidities when agitation was present in males and females. Principal Component Analysis (PCA) was performed to identify NPS associated with agitation and how they varied by sex. Result Males were more likely to experience anxiety (bvFTD: p <0.001, CBS: p <0.01, PSP: p <0.0001), apathy (nfvPPA: p <0.01, PSP: p <0.01), depression (bvFTD: p <0.0001, PSP<0.01), disinhibition (nfvPPA: p <0.0001), PSP: p <0.001), and motor symptoms (bvFTD: p <0.01, CBS: p <0.01) when agitation was present. In contrast, females had a higher likelihood of experiencing disinhibition in svPPA ( p <0.001). These findings suggest that agitation is associated with a wider range of NPS in males than in females. Agitation and NPS are especially prominent in males with PSP. Conclusion This study reveals significant sex differences in NPS in FTLD‐related syndromes when agitation is present. Males and especially PSP, are more likely to experience a broader range of NPS in association with agitation. These findings underscore the need for further investigation into the underlying mechanisms driving these sex differences, particularly focusing on the neurobiological impact of agitation, the recognition of symptoms in the presence of greater behavioral disturbances, and potential variations from informant reports. Understanding these factors will provide valuable insights into the role of agitation in the presentation of NPS across FTLD‐related syndromes. Ultimately, addressing these gaps will enhance our ability to effectively treat and manage agitation in both male and female patients with FTLD‐related syndromes.