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Feasibility and conduct of INSIGhT, a platform trial of patients with glioblastoma using Bayesian adaptive randomization.
Lee, Eudocia Q. , Trippa, Lorenzo , Fell, Geoffrey, Rahman, Rifaquat , Arrillaga‐Romany, Isabel , Welch, Mary , Ahluwalia, Manmeet S. , Colman, Howard, Hepel, Jaroslaw T., Schiff, David , Lu‐Emerson, Christine , Reardon, David A. , Wen, Patrick Y. , Ahluwalia, Manmeet S , Fell, Geoffrey G. , Arrillaga‐Romany, Isabel , Drappatz, Jan , Galanis, Evanthia , Colman, Howard , Nabors, Burt , Kaley, Thomas , Chiocca, E Antonio , Ligon, Keith L , Alexander, Brian M. , Wen, Patrick Yung

Journal of Clinical Oncology | June 6, 2022 | Volume: 40 | Issue: 16_suppl | Pages: 2012-2012

10.1200/jco.2022.40.16_suppl.2012 Get It

2012 Background: Individualized Screening Trial of Innovative Glioblastoma Therapy (INSIGhT) trial is a phase II platform trial using response adaptive randomization and deep genomic profiling to more efficiently test experimental agents in MGMT unmethylated glioblastoma and potentially accelerate identification of novel therapies for phase III testing. We report on the feasibility and conduct of this approach. Methods: Tumor genotyping was performed prior to treatment assignment on eligible participants with newly diagnosed MGMT-unmethylated glioblastoma to identify biomarker signatures. Initial randomization was 1:1:1:1 between control (temozolomide) and 3 experimental arms (abemaciclib, CC-115, and neratinib). Subsequent randomization was adapted based on Bayesian estimation of biomarker-naïve and biomarker-specific probabilities of treatment impact on progression-free survival (PFS). Ineffective or toxic arms were discontinued by protocol amendment. The primary endpoint was overall survival (OS). Results: INSIGhT randomized 71 patients to the control arm, 73 patients to the abemaciclib arm, 12 patients to the CC-115 arm, and 81 patients to the neratinib arm between 2/9/2017 and 5/14/2021. Following the initial equal randomization period, early data were repeatedly analyzed during the study to capture early signals of treatment effects across the enrolled population or in specific biomarker subgroups. The results of these interim analyses influenced the randomization probability for future enrolled patients. In total, 77% of the participants were randomized before assessing their biomarker profile and 23% were biomarker randomized. The CC-115 arm opened and closed three times during the safety lead-in. The randomization probability to the CC-115 arm decreased based on poor early PFS results and the arm eventually closed after 12 patients due to toxicity. The randomization probability to the abemacicilb arm increased based on promising early PFS results. After the completion of accrual into the abemaciclib arm, the trial switched to block randomization to finish enrolling into the remaining neratinib and control arms. A total of 28 interim analyses and 32 randomization tables were created throughout the course of the trial with 4 adjustments (3 due to CC-115 closures and 1 due to completion of the abemaciclib arm). Biomarker association trends for neratinib and abemaciclib were similar to those seen in preclinical modeling of the trial. Conclusions: Relative to a standard randomization design, the adaptive platform design facilitated more efficient and economical testing of experimental arms by sharing a control arm, decreasing the probability of enrollment to potentially ineffective arms, and increasing the probability of enrollment to potentially effective arms. Additional future arms are planned on INSIGhT. Clinical trial information: NCT02977780.
Prospective validation of a new imaging scorecard to assess leptomeningeal metastasis: A joint EORTC BTG and RANO effort.
Winklhofer, Sebastian , Lmalem, Hafida, Brandsma, Dieta , Kumthekar, Priya , Jaeckle, Kurt A. , Glantz, Michael , Wen, Patrick Y. , colleagues, EORTC RANO LM scorecard task force, including 38, Rhun, Émilie Le , Devos, Patrick , Smits, Marion , Tonn, Joerg-Christian , Preusser, Matthias , Wen, Patrick Yung , Bendszus, Martin , Weller, Michael , colleagues, EORTC RANO LM scorecard task force, including 38

Journal of Clinical Oncology | June 6, 2022 | Volume: 40 | Issue: 16_suppl | Pages: 2026-2026

10.1200/jco.2022.40.16_suppl.2026 Get It

2026 Background: Validation of the 2016 RANO MRI scorecard for leptomeningeal metastasis failed for multiple reasons. Accordingly, this joint EORTC Brain Tumor Group and RANO effort sought to prospectively validate a revised MRI scorecard for response assessment in leptomeningeal metastasis. Methods: Coded paired cerebrospinal MRI of 20 patients with leptomeningeal metastases from solid cancers at baseline and follow-up after treatment and instructions for assessment were provided via the EORTC imaging platform. The Kappa coefficient was used to evaluate the inter-observer pairwise agreement. Results: Thirty-five raters participated, including 9 neuroradiologists, 17 neurologists, 4 radiation oncologists, 3 neurosurgeons and 2 medical oncologists. Among single leptomeningeal metastases-related imaging findings at baseline, the best median concordance was noted for hydrocephalus (Kappa = 0.63), and the worst median concordance for spinal linear enhancing disease (Kappa = 0.46). The median concordance of raters for the overall response assessment was moderate (Kappa = 0.44). Notably, the interobserver agreement for the presence of parenchymal brain metastases at baseline was fair (Kappa = 0.29) and virtually absent for their response to treatment. 394 of 700 ratings (20 patients x 35 raters, 56%) were fully completed. In 308 of 394 fully completed ratings (78%), the overall response assessment perfectly matched the summary interpretation of the single ratings as proposed in the scorecard instructions. Conclusions: This study confirms the principle utility of the new scorecard, but also indicates the need for training of MRI assessment with a dedicated reviewer panel in clinical trials. Electronic case report forms with “blocking options” may be required to enforce completeness and quality of scoring.
Diaphragm muscle function in a mouse model of early-onset spasticity
Fogarty, Matthew J. , Brandenburg, Joline E. , Zhan, Wen‐Zhi, Sieck, Gary C. , Sieck, Gary , Fogarty, Matthew J

Journal of Applied Physiology | May 19, 2022 | Volume: 133 | Issue: 1 | Pages: 60-68

10.1152/japplphysiol.00157.2022 | PMID 35608200 Get It

Developmental motor control dysfunctions, including spastic cerebral palsy (sCP) often have respiratory components. Spa mutant mice exhibit a spastic phenotype closely resembling sCP symptoms. Using the spa mouse model of spastic cerebral palsy (sCP), we quantified transdiaphragmatic pressure deficits, diaphragm muscle weakness, and fiber type-specific atrophy, improving our understanding of respiratory dysfunctions in sCP.
Monoclonal and oligoclonal anti-platelet factor 4 antibodies mediate VITT
Kanack, Adam J. , Bayas, Antonios , George, Gemlyn , Singh, Bandana, Kohlhagen, Mindy , Splinter, Noah P., Christ, Monika , Naumann, Markus, Moser, Karen , Smock, Kristi J. , Grazioli, Alison , Wen, Renren , Wang, Demin , Murray, David , Padmanabhan, Anand , Abou-Ismail, Mouhamed Yazan , Kohlhagen, Mindy C, Smock, Kristi J , Wen, Renren , Murray, David L., Padmanabhan, Anand , Wang, Demin

Blood | May 13, 2022 | Volume: 140 | Issue: 1 | Pages: 73-77

10.1182/blood.2021014588 | PMID 35560046 Get It

Kanack and colleagues analyze anti-platelet factor 4 antibodies from 5 patients with vaccine-induced thrombotic thrombocytopenia (VITT) secondary to COVID-19 adenoviral vaccination and antibodies from patients with spontaneous heparin-induced thrombocytopenia (HIT) and classical HIT. VITT antibodies are monoclonal or oligoclonal, similar to spontaneous HIT, whereas classical HIT antibodies are polyclonal. Heparin inhibits antibody-induced platelet activation in VITT, suggesting that heparin should be considered for the treatment of VITT.
Pembrolizumab in Combination with Neoadjuvant Chemoradiotherapy for Patients with Resectable Adenocarcinoma of the Gastroesophageal Junction
Zhu, Mojun , Foster, Nathan R. , Hartley, Christopher , Mounajjed, Taofic, Fruth, Briant, Beamer, Staci E. , Harrington, Susan M. , Pitot, Henry C., Sanhueza, Cristobal T., Feng, Yening , Herrmann, Joerg , Huang, Bing, Bekaii‐Saab, Tanios , Wigle, Dennis A. , Ahn, Daniel H. , Hallemeier, Chris L., Yoon, Harry H. , Salomao, Marcela A, Fruth, Briant F, Feng, Yening , McWilliams, Robert R , Huang, Bing Q, Ma, Wen Wee , Dong, Haidong , Wigle, Dennis, Blackmon, Shanda , Yoon, Harry H , Bekaii-Saab, Tanios S , Chen, Chunhua , Hartley, Christopher P , Salomao, Marcela , Kim, Yohan , McWilliams, Robert R. , Lucien, Fabrice , Wee, Wen , Dong, Haidong

Clinical Cancer Research | May 12, 2022 | Volume: 28 | Issue: 14 | Pages: 3021-3031

10.1158/1078-0432.ccr-22-0413 | PMID 35552651 Get It

Abstract Purpose: This phase Ib/2 trial investigated pembrolizumab-containing trimodality therapy in patients with gastroesophageal junction (GEJ) adenocarcinoma. Patients and Methods: Patients with GEJ adenocarcinoma (cT1–3NanyM0) received neoadjuvant pembrolizumab-containing chemoradiation (CROSS regimen) followed by surgical resection and adjuvant pembrolizumab. The primary endpoints were tolerability in the first 16 patients and pathologic complete response [pCR (ypT0N0)]. Secondary endpoints included progression-free survival (PFS) and overall survival (OS). An independent propensity-score-matched cohort (treated with CROSS without immunotherapy) was used for comparison. Exploratory analyses included immune biomarkers in the tumor microenvironment (TME) and plasma. Results: We enrolled 31 eligible patients, of whom 29 received all expected doses of neoadjuvant pembrolizumab and 28 underwent R0 resection. Safety endpoints were met. The primary efficacy endpoint was not met [7/31 (22.6%) achieved pCR]. Patients with high [i.e., combined positive score (CPS) ≥ 10] baseline expression of programmed death (PD)-L1 in the TME had a significantly higher pCR rate than those with low expression [50.0% (4/8) vs. 13.6% (3/22); P = 0.046]. Patients with high PD-L1 expression also experienced longer PFS and OS than propensity-score-matched patients. Among trial patients with PD-L1 CPS < 10, unprespecified analysis explored whether extracellular vesicles (EV) could identify further responders: an elevated plasma level of PD-L1–expressing EVs was significantly associated with higher pCR. Conclusions: Adding pembrolizumab to trimodality therapy showed acceptable tolerability but did not meet the pre-specified pCR endpoint. Exploratory analyses suggested that high PD-L1 expression in the TME and/or on EVs may identify patients most likely to achieve tumor response.
BETA: a comprehensive benchmark for computational drug–target prediction
Zong, Nansu , Li, Ning , Ngo, Victoria , Yu, Yue , Chowdhury, Shaika , Jiang, Chao , Weinshilboum, Richard M. , Jiang, Guoqian , Chowdhury, Shaika , Weinshilboum, Richard, Wen, Andrew , Huang, Ming , Fu, Sunyang , Weinshilboum, Richard M. , Hunter, Lawrence , Liu, Hongfang

Briefings in Bioinformatics | May 4, 2022 | Volume: 23 | Issue: 4 | Pages: No page available

10.1093/bib/bbac199 | PMID 35649342 Get It

Abstract Internal validation is the most popular evaluation strategy used for drug–target predictive models. The simple random shuffling in the cross-validation, however, is not always ideal to handle large, diverse and copious datasets as it could potentially introduce bias. Hence, these predictive models cannot be comprehensively evaluated to provide insight into their general performance on a variety of use-cases (e.g. permutations of different levels of connectiveness and categories in drug and target space, as well as validations based on different data sources). In this work, we introduce a benchmark, BETA, that aims to address this gap by (i) providing an extensive multipartite network consisting of 0.97 million biomedical concepts and 8.5 million associations, in addition to 62 million drug–drug and protein–protein similarities and (ii) presenting evaluation strategies that reflect seven cases (i.e. general, screening with different connectivity, target and drug screening based on categories, searching for specific drugs and targets and drug repurposing for specific diseases), a total of seven Tests (consisting of 344 Tasks in total) across multiple sampling and validation strategies. Six state-of-the-art methods covering two broad input data types (chemical structure- and gene sequence-based and network-based) were tested across all the developed Tasks. The best-worst performing cases have been analyzed to demonstrate the ability of the proposed benchmark to identify limitations of the tested methods for running over the benchmark tasks. The results highlight BETA as a benchmark in the selection of computational strategies for drug repurposing and target discovery.
Brain metastases: A Society for Neuro-Oncology (SNO) consensus review on current management and future directions
Aizer, Ayal A. , Lamba, Nayan , Ahluwalia, Manmeet S. , Aldape, Kenneth , Boire, Adrienne , Brown, Paul D. , Camidge, D. Ross , Chiang, Veronica , Davies, Michael A. , Hu, Leland , Huang, Raymond Y. , Kumthekar, Priya , Lam, Keng , Lee, Eudocia Q. , Parsons, Michael , Reardon, David A. , Sheehan, Jason P. , Tawbi, Hussein A. , Weller, Michael , Wen, Patrick Y. , Kaufmann, Timothy, Kumthekar, Priya , Parsons, Michael W , Soffietti, Riccardo , Tawbi, Hussein , Weller, Michael , Ahluwalia, Manmeet S , Huang, Raymond , Brastianos, Priscilla K. , Kaufmann, Timothy J. , Lin, Nancy U. , Mehta, Minesh P. , Soffietti, Riccardo , Wen, Patrick Yung

Neuro-Oncology | May 3, 2022 | Volume: 24 | Issue: 10 | Pages: 1613-1646

10.1093/neuonc/noac118 | PMID 35762249 Get It

Abstract Brain metastases occur commonly in patients with advanced solid malignancies. Yet, less is known about brain metastases than cancer-related entities of similar incidence. Advances in oncologic care have heightened the importance of intracranial management. Here, in this consensus review supported by the Society for Neuro-Oncology (SNO), we review the landscape of brain metastases with particular attention to management approaches and ongoing efforts with potential to shape future paradigms of care. Each coauthor carried an area of expertise within the field of brain metastases and initially composed, edited, or reviewed their specific subsection of interest. After each subsection was accordingly written, multiple drafts of the manuscript were circulated to the entire list of authors for group discussion and feedback. The hope is that the these consensus guidelines will accelerate progress in the understanding and management of patients with brain metastases, and highlight key areas in need of further exploration that will lead to dedicated trials and other research investigations designed to advance the field.
Population pharmacokinetics for oral paclitaxel in patients with advanced/metastatic solid tumors
He, Zhijian , Deva, Sanjeev , Hung, Tak, Clarke, Katriona, Chao, Tsu‐Yi , Dai, Ming‐Shen , Yeh, Hsien‐Tang , Kramer, Douglas, Kwan, Rudolf, Cutler, David L. , Zhi, Jay, Jackson, Christopher , Segelov, Eva , Wee, Wen , Chan, Wing‐Kai

CPT: Pharmacometrics & Systems Pharmacology | April 26, 2022 | Volume: 11 | Issue: 7 | Pages: 867-879

10.1002/psp4.12799 | PMID 35470967 Get It

AbstractOraxol consists of an oral dosage form of the chemotherapeutic agent paclitaxel administered with a novel P‐glycoprotein inhibitor encequidar methanesulfonate monohydrate (formerly named HM30181A), which allows oral treatment of cancers that would otherwise be treated with intravenous paclitaxel. Here we describe the population pharmacokinetics (popPK) analyses for oral paclitaxel in patients with advanced/metastatic solid tumors to characterize pharmacokinetic (PK) profiles and quantify sources of PK variability. The best fit popPK model for oral paclitaxel, based on data from seven clinical studies (197 patients with advanced/metastatic solid tumors), involves a linear two‐compartment structural model containing first‐order absorption with a short lag time and first‐order elimination as well as a log additive error. In this popPK model, lower population estimates of central volume for Asian patients versus Caucasian patients did not translate into clinical meaningful differences in oral paclitaxel exposure. Age, sex, body weight or surface area, mild hepatic impairment, and mild to moderate renal impairment had no clinically meaningful effects on the systemic exposure of oral paclitaxel. Simulations were performed on clinical therapeutic dose (oral paclitaxel 205 mg/m2 once daily ×3 days per week) to predict exposure of oral paclitaxel and to support treatment benefits observed in a pivotal phase III trial.
Phase I/randomized phase II trial of TRC105 plus bevacizumab versus bevacizumab in recurrent glioblastoma: North Central Cancer Treatment Group N1174 (Alliance)
Galanis, Evanthia , Anderson, S. Keith , Twohy, Erin , Butowski, Nicholas , Hormigo, Adı́lia , Schiff, David , Jaeckle, Kurt A. , Kumar, Shaji , Kaufmann, Timothy J. , Geyer, Susan M. , Kumthekar, Priya , Campian, Jian , Buckner, Jan C. , Wen, Patrick Y , Kaufmann, Timothy J , Giannini, Caterina , Buckner, Jan C , Galanis, Evanthia , Anderson, S Keith , Omuro, Antonio , Giannini, Caterina

Neuro-Oncology Advances | April 4, 2022 | Volume: 4 | Issue: 1 | Pages: No page available

10.1093/noajnl/vdac041 | PMID 35664553 Get It

Abstract Background Patients with glioblastoma (GBM) have a poor prognosis and limited effective treatment options. Bevacizumab has been approved for treatment of recurrent GBM, but there is questionable survival benefit. Based on preclinical and early clinical data indicating that CD105 upregulation may represent a mechanism of resistance to bevacizumab, we hypothesized that combining bevacizumab with the anti-CD105 antibody TRC105 may improve efficacy in recurrent GBM. Methods Phase I dose-escalation/comparative randomized phase II trial in patients with GBM. During phase I, the maximum tolerated dose (MTD) of TRC105 in combination with bevacizumab was determined. In phase II, patients were randomized 1:1 to TRC105 and bevacizumab or bevacizumab monotherapy. Patients received TRC105 (10 mg/kg) weekly and bevacizumab (10 mg/kg) every 2 weeks. Efficacy, as assessed by progression-free survival (PFS), was the primary endpoint; safety, quality of life, and correlative outcomes were also evaluated. Results In total, 15 patients were enrolled in phase I and 101 in phase II; 52 patients were randomized to TRC105 with bevacizumab and 49 to bevacizumab monotherapy. The MTD was determined to be 10 mg/kg TRC105 weekly plus bevacizumab 10 mg/kg every 2 weeks. An increased occurrence of grade ≥3 adverse events was seen in the combination arm, including higher incidences of anemia. Median PFS was similar in both treatment arms: 2.9 months for combination versus 3.2 months for bevacizumab monotherapy (HR = 1.16, 95% CI = 0.75–1.78, P = .51). Quality of life scores were similar for both treatment arms. Conclusions TRC105 in combination with bevacizumab was well tolerated in patients with recurrent GBM, but no difference in efficacy was observed compared to bevacizumab monotherapy.
CLO22-088: Phase II Trial of Trifluridine/Tipiracil in Combination With Irinotecan in Advanced Biliary Tract Cancers (BTCs)
Tella, Sri Harsha , Wessling, Jaclynn, Nathan, Foster, Qian, Shi, Nguyen, Tran, McWillimas, Robert, Steven, Alberts, Liu, Minetta C. , Hartgers, Mindy L., Washburn, Leslie, Briant, Fruth, Fernández-Zapico, Martín E. , Hogenson, Tara L. , Pitot, Henry C., Qian, Shi, Borad, Mitesh J. , Wee, Wen , Jin, Zhaohui , Mahipal, Amit

Journal of the National Comprehensive Cancer Network | March 31, 2022 | Volume: 20 | Issue: 3.5 | Pages: CLO22-088

10.6004/jnccn.2021.7328 Get It