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Kim, Yohan

0000-0002-4009-1694

Mayo Clinic

Mayo Clinic

Citations 18

Calibration of Flow Cytometers Enables Reproducible Measurements of Extracellular Vesicle Concentrations and Reference Range Establishment
Bettin, Britta , Li, Bo , Falkena, Kim, Leeuwen, Ton G. van , Gollwitzer, Christian , Varga, Zoltán , Antović, Jovan P. , Berckmans, Pascale , Buzás, Edit I. , Cook, Sean, Dignat‐George, Françoise , Lacroix, Romaric , Maaninka, Katariina , Menezes, Erika G. Marques de , Meyer, Annette, Mizenko, Rachel R. , Nelissen, Inge , Norris, Philip J. , Pink, Desmond , Poudel, Sumeet , Robert, Stéphane, Siljander, Pia , Tang, Vera A. , Broeck, Tina Van Den, Bettin, Britta A , van Leeuwen, Ton G , Ajzenberg, Nadine , Berckmans, Pascale , Buzas, Edit I , Carney, Randy P , Dignat-George, Françoise , Faille, Dorothee , Giebel, Bernd , Jones, Jennifer C , Lacroix, Romaric , Lannigan, Joanne , Lucien, Fabrice , Maaninka, Katariina , de Menezes, Erika G Marques , Mizenko, Rachel R , Nelissen, Inge , Pink, Desmond , Poudel, Sumeet , Siljander, Pia R-M , Tang, Vera A , Tertel, Tobias , Wang, Lili , Welsh, Joshua A , Nieuwland, Rienk , van der Pol, Edwin , Cook, Sean M, Giebel, Bernd , Jones, Jennifer , Kim, Yohan , Lucien, Fabrice , Meyer, Annette, Nolan, John, Welsh, Joshua A , Nieuwland, Rienk

Journal of Extracellular Vesicles | December 15, 2025 | Volume: 14 | Issue: 12 | Pages: No page available

10.1002/jev2.70189 Get It

ABSTRACT The concentration of cells is a key component of modern blood tests. Given the biomarker potential of extracellular vesicles (EVs) in blood, we aimed to establish reference ranges for blood cell‐derived EVs using flow cytometry. To address the orders‐of‐magnitude variability in reported EV concentrations between different flow cytometers (FCMs), we first validated a calibration methodology to enable reproducible EV concentration measurements. The methodology was evaluated in an interlaboratory comparison study and shows that calibration reduces the median absolute deviation of EV concentrations measured on 25 different FCMs from 67 % to 25 %–31 %. The calibration methodology was then used to determine reference ranges of erythrocyte‐, leukocyte‐, and platelet‐derived EVs in human blood plasma in a cohort of healthy individuals ( n = 224). This study demonstrates that calibration enables comparable concentration measurements of blood cell‐derived EVs, thereby bringing EVs one step closer to clinical applications.
Reproducible Gating for High-Resolution Flow Cytometric Characterization of Extracellular Vesicles in Next-Generation Biomarker Studies
Thapa, Ishwor , Kim, Yohan , Lucien, Fabrice , Ali, Hesham

Proceedings of the 18th International Joint Conference on Biomedical Engineering Systems and Technologies | February 25, 2025 | Volume: No volume available | Issue: No issue available | Pages: 1020-1027

10.5220/0013318900003911 Get It

Reduction of soluble PD-L1 by plasma exchange and radiation therapy in patients with refractory melanoma re-sensitizes to immunotherapy.
Orme, Jacob J. , Lingamaneni, Prashanth, Lavoie, Roxane R. , Hirdler, Jacob, Bering, Elizabeth A., Gicobi, Joanina K. , Hsu, Michelle A. , Dale, Heather, Kottschade, Lisa A. , Block, Matthew S. , Markovic, Svetomir, Olivier, Ken, Owen, Dawn , Dronca, Roxana , Packard, Annie T. , Zhang, Henan , Kim, Yohan , Dorr, Maddy, Dizona, Paul, Hirdler, Jacob B. , Hsu, Michelle, Dale, Heather, Childs, Daniel S. , McWilliams, Robert R. , Mansfield, Aaron S. , Markovic, Svetomir N. , Lester, Scott C. , Daniel, J. , Dong, Haidong , Lucien, Fabrice , Winters, Jeffrey L. , Park, Sean S.

No container title available | October 30, 2024 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.21203/rs.3.rs-4542220/v1 Get It

Abstract Introduction: Immune checkpoint inhibitors (ICI) are an essential systemic therapy for advanced melanoma. However, most melanomas develop resistance to ICI. Tumor-derived soluble PD-L1 (sPD-L1) and other soluble immunosuppressive factors drive checkpoint inhibitor resistance and correlate with inferior survival. We previously showed that therapeutic plasma exchange (TPE) removes sPD-L1 from circulation. Thus, we hypothesized that TPE-mediated removal of sPD-L1 and other immunosuppressive factors could overcome immunotherapy resistance in refractory melanoma. Methods: In this clinical trial (NCT04581382), we prospectively enrolled eighteen (18) patients with widely metastatic melanoma with progression despite anti-PD-1 ICI and elevated sPD-L1 by ELISA (≥1.7ng/mL). Each patient received radiotherapy to between one and three metastatic lesions (at least two unirradiated lesions) followed by three TPE sessions on consecutive days and re-challenge with checkpoint inhibitor. The primary safety and efficacy endpoints of the study were adverse events (AEs) and sPD-L1 reduction by TPE, respectively. Secondary endpoints included RECIST-based response in unirradiated lesions and overall survival. Correlative studies included kinetics of sPD-L1 and soluble immonsuppressive factors and dynamics of peripheral immune cell phenotypes. Results: Mean age was 62 (SD 13) and seven of eighteen (39%) were female. Mean baseline sPD-L1 was 26.31 ng/mL (40.01). The treatment was well-tolerated with one (6%) patient with grade 3 and 4 adverse events from a central line infection after TPE. Levels of sPD-L1 were significantly reduced by TPE (mean 80.2% reduction, p<0.0001). Two patients (11.1%) experienced complete response (CR), one (5.6%) partial response, three (16.7%) stable disease, and 12 (66.7%) progressive disease. In one case, immunotherapy was discontinued after two years due to no detectable lesions. Changes in tumor-reactive (TTR) GZMB+/CX3CR1+/CD11ahigh and other peripheral immune cell populations predicted overall survival in this cohort. In addition to sPD-L1, other soluble mediators of ICI resistance were also reduced by TPE and predicted overall survival in this cohort. Summary/Conclusion: sPD-L1 and other soluble immunoregulatory signaling molecules are important mediators of ICI resistance. SBRT and TPE can resensitize ICI-refractory melanoma by removing these factors. Patients with persistently elevated or rapid rebound of sPD-L1 following TPE experienced poor response and overall survival. Serial monitoring of sPD-L1 may predict response to ICI and multiple courses of TPE may be necessary. Our findings may apply in other ICI-resistant cancers with elevated sPD-L1. ClinicalTrials.gov registration: NCT04581382, ReCIPE-M1 (Rescuing Cancer Immunotherapy with Plasma Exchange in Melanoma 1).
Abstract 4995: Impact of radiotherapy on extracellular vesicle mediated anti-tumor immunity in oligometastatic prostate cancer
Uzendu, Chisom, Lavoie, Roxane R. , Lucien-Matteoni, Fabrice, Kim, Yohan , Dong, Haidong , Park, Sean S.

Cancer Research | March 22, 2024 | Volume: 84 | Issue: 6_Supplement | Pages: 4995-4995

10.1158/1538-7445.am2024-4995 Get It

Abstract Metastasis-ablative radiotherapy is a new therapeutic approach that prolongs survival in patients with advanced cancers. Tumour irradiation can elicit an immunogenic cell death resulting in the expansion of tumour-reactive T cells and eradication of both irradiated and distant non-irradiated metastases, referred to as the “abscopal effect”. This abscopal response, nevertheless, is observed in a minority of patients suggesting uncharacterized mechanisms that prevent robust systemic anti-tumor immune response. Tumour-derived extracellular vesicles (TdEVs) have recently emerged as mediators of antitumor immunity but their immunomodulatory role in response to radiotherapy remains largely unknown. Recent clinical studies by our lab have demonstrated that circulating levels of tumour-derived extracellular vesicles (tdEVs) are elevated in response to radiotherapy and high tdEV concentrations are associated with reduced levels of peripheral cytotoxic CD8+ T cells and higher risk of disease recurrence in advanced prostate cancer. Based on our findings, we hypothesize that radiotherapy induces the release of tumor-derived EVs that suppress anti-tumor immunity. Prostate cancer cells (PC3 and DU145) were irradiated with clinically used doses of ionizing radiation (20Gy x 1 or 10Gy x 3 fractions) and tdEVs were co-cultured with human CD8+ T cells to measure their proliferation and cytotoxic activity. Increased levels of tdEVs were released by tumour cells treated with radiotherapy. A higher frequency of impaired T cell cytotoxic activity and a reduction in CD8 T cell proliferation was found in the 10Gy x 3 radiation regimen. Proteomic analysis and western blot showed an increased expression of the immune checkpoint molecule B7-H3 on the tumour cell surface and tdEVs in response to radiotherapy. While coculture of CD8 T cells with B7-H3 depleted tdEVs led to recovery of T-cell cytotoxic ability, overexpression of the B7-H3 in tdEVs inhibited cytotoxic activity. This study provides a rationale for future studies in which we will test the immune-mediated effects of radiotherapy-induced tdEVs in immunocompetent mouse models and investigate B7-H3 blockade as a therapeutic approach to boost abscopal response in the treatment of advanced prostate cancer. Citation Format: Chisom J. Uzendu, Yohan Kim, Roxane R. Lavoie, Haidong Dong, Sean Park, Fabrice Lucien-Matteoni. Impact of radiotherapy on extracellular vesicle mediated anti-tumor immunity in oligometastatic prostate cancer [abstract]. In: Proceedings of the American Association for Cancer Research Annual Meeting 2024; Part 1 (Regular Abstracts); 2024 Apr 5-10; San Diego, CA. Philadelphia (PA): AACR; Cancer Res 2024;84(6_Suppl):Abstract nr 4995.
Nanoprojectile Secondary Ion Mass Spectrometry Enables Multiplexed Analysis of Individual Hepatic Extracellular Vesicles
Lee, Seonhwa , Verkhoturov, Dmitriy S., Eller, Michael J. , Verkhoturov, Stanislav V. , Shaw, Michael , Gwon, Kihak , Revzin, Alexander , Shaw, Michael A , Revzin, Alexander , Schweikert, Emile A , Eller, Michael J , Gwon, Kihak , Kim, Yohan , Lucien, Fabrice , Malhi, Harmeet

ACS Nano | November 30, 2023 | Volume: 17 | Issue: 23 | Pages: 23584-23594

10.1021/acsnano.3c06604 Get It

28 Toward an automated microfluidic platform for monitoring immune response to immunotherapy
Zhang, Yuqian , Lucien-Matteoni, Fabrice, Liu, Yuguang , Kim, Yohan , Dong, Haidong

Regular and Young Investigator Award Abstracts | October 31, 2023 | Volume: No volume available | Issue: No issue available | Pages: A30-A31

10.1136/jitc-2023-sitc2023.0028 Get It

Resilient CD8+ T cells maintain a high cytotoxic capacity by balancing ROS and energy needs via ME1 upregulation
Gicobi, Joanina K. , Mao, Zhiming , DeFranco, Grace , Li, Ying , Hirdler, Jacob, Vianzon, Vianca , Abraha, Feven , Harmsen, William S. , Yan, Yiyi , Dronca, Roxana , Zhu, Mojun , Wu, Xiaosheng , Owen, Dawn , Orme, Jacob J. , Liu, Xin , Hirdler, Jacob B. , Vianzon, Vianca V , Dellacecca, Emilia R. , Hsu, Michelle A. , Barham, Whitney , Kim, Yohan , Markovic, Svetomir N. , Mansfield, Aaron S. , Lin, Yi , Grams, Michael P. , Lucien, Fabrice , Zeng, Hu , Park, Sean S. , Dong, Haidong

The Journal of Immunology | August 10, 2023 | Volume: 210 | Issue: Supplement_1 | Pages: 157.06-157.06

10.4049/jimmunol.210.supp.157.06 Get It

Abstract Cytotoxic T lymphocytes (CTL) are indispensable in anti-tumor immunity. Although CTLs are prone to exhaustion in patients with advanced cancer, T cell resiliency explains the presence of tumor-reactive CTLs that are less exhausted, capable of cytolytic function, expansion, and rebound in response to immunotherapy to reject metastatic malignancies. However, the features of resilient T cells have not been clearly defined. In this report, we demonstrate that peripheral CX3CR1+ CD8+ T cells with low mitochondrial membrane potential rebounded CTL function quickly after radiation therapy in patients with large tumor burden portraying their functional resiliency. Furthermore, CX3CR1+ CD8+ T cell with low, but not high, mitochondrial membrane potential are highly cytotoxic, accumulate less reactive oxygen species (ROS), and express more Malic enzyme 1 (ME1). ME1 overexpression increases ATP production in a glycolysis-independent manner while concurrently curtailing excessive ROS in activated CD8+ T cells; and expands CX3CR1+NKG7+ effector CD8+ T cells with enhanced cytotoxicity. Importantly, transfection of ME1 mRNA promotes tumoricidal activity in CD8+ T cells from patients with advanced cancers. Our study reveals a mechanism used by CTLs to balance excessive ROS via ME1 to maintain a metabolic and functional resiliency. Modification of ME1 expression in CTLs may be a novel method to improve the efficacy of cancer immunotherapy by preventing T cell exhaustion. Supported by grants from Mayo Clinic Foundation and NIH (R01CA 256927-2)
Abstract 364: Vascular Endothelial Growth Receptor 2 (Flk1) Donor Exosomes Drive Angiogenesis
Rizzo, Skylar A. , Mahlberg, Ryan , Amontree, Ashley, Peterson, Timothy E., Bagwell, Monique, Arrell, D. Kent , Witt, Tyra A. , Nagel, Mary, Park, Sungjo , Sabbah, Michael S. , Li, Mark , Kargaran, Parisa K, Wu, Yue , Li, Jialun , Moran, Steven L. , Shi, Ao , Bagwell, Monique S , Nagel, Mary, Kim, Yohan , Lucien, Fabrice , Terzic, André , Behfar, Atta

Arteriosclerosis, Thrombosis, and Vascular Biology | November 30, 2022 | Volume: 42 | Issue: Suppl_1 | Pages: No page available

10.1161/atvb.42.suppl_1.364 Get It

Objectives: Peripheral arterial disease is a significant cause of morbidity and mortality. The goal of this study was to develop a novel treatment to promote angiogenesis. Platelets have been previously implicated in angiogenic events; however, platelet activation rather than presence of growth factors has been associated with new blood vessel formation. This study evaluated exosomes purified from activated platelets to determine their potential in promoting angiogenesis both in vitro and in vivo. Methods & Results: Under Current Good Manufacturing Practices, conditioned medium processed from apheresis platelet cultures yielded a purified exosome product (PEP) enriched for CD63, CD9 and Alix. In vitro, PEP drove HUVEC proliferation, migration, and vascular tube formation. Proteomic evaluation showed Flk1 (VEGFR2) was one of the key angiogenic proteins in PEP. HUVECs treated with Flk1 antibody neutralized PEP (anti-Flk1-PEP) showed reduced vascular tube formation compared to PEP. To evaluate in vivo angiogenesis, a rodent model of hindlimb ischemia was treated with sustained release PEP embedded in fibrin glue (PEP/TISSEEL) with blood flow evaluated by SPY angiography at 28 days post-treatment. Animals treated with PEP/TISSEEL showed improved blood flow with significant difference (p<0.001) as compared to sham, TISSEEL, and anti-Flk1-PEP/TISSEEL. Muscle tissue stained with α smooth muscle actin showed a significant increase (p<0.001) in vascular area in PEP/TISSEEL treated animals compared to TISSEEL alone. To further evaluate clinical translatability, a rabbit ear ischemia wound model was then treated with PEP/TISSEEL. Rabbit ears showed accelerated wound healing and restored blood flow on SPY angiography. Histologic evaluation of vascular area showed a significant increase in vascular area (p<0.05) compared to sham and TISSEEL alone animals. Conclusions: Exosome driven donation of Flk1 here promoted angiogenic events and was successfully translated into healing outcomes in the setting of two animal models of peripheral ischemia. This novel insight into biotherapy achievable pro-angiogenesis establishes a clinical-grade off-the-shelf exosome technology for the treatment of peripheral vascular disease.
Abstract A036: Surfaceome profiling of rhabdomyosarcoma reveals B7-H3 as a mediator of immune evasion
Lavoie, Roxane R. , Gargollo, Patricio C. , Baer, Emily , Phelps, Doris A., Charlesworth, M. Cristine , Hougthon, Peter J., Cheville, John C. , Granberg, Candace F. , Lucien, Fabrice , Ahmed, Mohamed E. , Kim, Yohan , Madden, Benjamin , Wang, Liguo , Dong, Haidong

Clinical Cancer Research | September 15, 2022 | Volume: 28 | Issue: 18_Supplement | Pages: A036-A036

10.1158/1557-3265.sarcomas22-a036 Get It

Abstract Introduction: Pediatric rhabdomyosarcoma (RMS) is the most common soft tissue tumor in children, with nearly 20% of children presenting with locally aggressive and/or metastatic disease. Despite aggressive chemotherapy and radiotherapy, the 5-year overall survival rate is still less than 40%. In addition, resistance to chemotherapy remains the major cause of cancer-related mortality. Therefore, there is an unmet need to develop more effective and tolerable therapeutic strategies for the treatment of RMS. Our overall objective is to leverage transcriptomic and proteomic profiling methods to identify RMS-specific surface proteins targetable with immune-based therapies. Methods: To identify therapeutic targets, we performed cell-surface capture and mass spectrometry on fusion-positive (FP), fusion-negative (FN) RMS and normal skeletal muscle. Transcriptomic datasets of RMS tumor specimens and normal tissue were employed to identify high-confidence RMS-specific cell-surface proteins. Expression of immune checkpoint molecules was confirmed by flow cytometry, western blot and PCR. Paraffin-embedded tissue sections were used to determine protein expression and prognostic value in RMS patients. We developed an in vitro T-cell killing assay to assess the functional role of immune checkpoint molecules on the antitumor immune response. Results: Surfaceome profiling of RMS cells revealed unique protein signatures specific for each tumor type and normal tissue. We have identified 5061 cell-surface proteins in RMS and 31.6% of proteins were correctly located at the plasma membrane. By integrating proteomic and transcriptomic data, we have identified 30 and 38 proteins significantly overexpressed in fusion-negative and fusion-positive RMS respectively compared to normal muscle. We have identified the immune checkpoint molecule B7-H3 as cell-surface protein overexpressed in both RMS subtypes. Strong expression of B7-H3 was also observed in patient’s tumor specimens. Genetic deletion of B7-H3 gene in RMS cells was associated with higher antitumor immune response in tumor cells co-cultured with CD8+-T cells. No difference was observed in tumor cell proliferation and radioresistance. Conclusions: Through integrated transcriptomic and proteomic profiling, we have discovered B7-H3 as a key regulator of tumor immune-evasion in RMS. B7-H3 is a suitable immunotherapy target for the treatment of RMS. Further studies are warranted to elucidate underlying mechanisms of B7-H3 function in RMS. Citation Format: Roxane R. Lavoie, Fabrice Lucien, Patricio C. Gargollo, Mohamed E. Ahmed, Yohan Kim, Emily Baer, Doris Phelps, Cristine M. Charlesworth, Benjamin J. Madden, Liguo Wang, Peter J. Hougthon, John Cheville, Haidong Dong, Candace F. Granberg. Surfaceome profiling of rhabdomyosarcoma reveals B7-H3 as a mediator of immune evasion [abstract]. In: Proceedings of the AACR Special Conference: Sarcomas; 2022 May 9-12; Montreal, QC, Canada. Philadelphia (PA): AACR; Clin Cancer Res 2022;28(18_Suppl):Abstract nr A036.
Calibration and standardization of extracellular vesicle measurements by flow cytometry for translational prostate cancer research
Arafa, Ali , Thapa, Ishwor , Britton, Cameron J. , Kosti, Jorgena, Song, Siyang , Joshi, Vidhu B. , Erickson, Ree M., J Britton, Cameron, Joshi, Vidhu B , M Erickson, Ree, Lucien, Fabrice , Kim, Yohan , van der Pol, Edwin , Ali, Hesham , Lucien, Fabrice

Nanoscale | May 31, 2022 | Volume: 14 | Issue: 27 | Pages: 9781-9795

10.1039/d2nr01160c Get It

Higher levels of tumor-derived extracellular vesicles are detected in metastatic prostate cancer compared to localized prostate cancer by standardized and calibrated flow cytometry.