Graff‐Radford, Jonathan

Abstract Background Individuals with coexisting Alzheimer's disease (AD) and disorders of CSF dynamics such as normal‐pressure hydrocephalus (NPH) have lower CSF Aβ42 levels, which can confound interpretation of AD CSF‐biomarkers. However, little is known about how CSF dynamics influences plasma AD biomarkers. The objective of this study was to determine whether mass spectrometry‐based blood tests for AD are associated with disproportionately enlarged subarachnoid space hydrocephalus (DESH) on MRI. Method 509 Individuals from the Mayo Clinic Study of Aging, with MRI, 11C‐Pittsburgh compound B (Aβ) PET scans, and plasma phosphorylated‐tau protein 217, Aβ40 and Aβ42 were included. We performed an age‐adjusted logistic regression to determine whether abnormal values of p ‐Tau 217 (Abnormal if >1.55 pg/mL), %p‐tau217 defined as the ratio of phosphorylated Tau217 to non‐phosphorylated tau x 100% (Abnormal if >1.55%), Aβ42 (Abnormal if <41.5 pg/mL), and Aβ42/40 ratio (Abnormal if <0.094) were associated with the presence of DESH, as classified by a previously validated automated algorithm. Result Thirty‐two participants were classified as DESH‐positive. The median [IQR] age was 76.8 yrs [70.6, 82.9] for participants with DESH and 72.4 [59.3, 85.5] without DESH (Table 1). An abnormal plasma Aβ42 was associated with DESH (OR, 2.56 [1.19, 5.74], p = 0.018), but having an abnormal Aβ42/40 ratio (OR 2.01 [0.94, 4.56], p = 0.079) was not. There was no association between being DESH‐positive and an abnormal plasma p ‐tau217 (OR 1.30 [0.51, 3.09], p = 0.560) or with abnormal %plasma p ‐tau217 (OR 1.82 [0.74, 4.20], p = 0.17) (Figure 1). Subgroup analysis showed that only those participants who had an abnormal Aβ42 and positive amyloid PET (≥25 Centiloids) showed an association with DESH compared to biomarker‐ and PET‐negative participants (OR 3.10 [1.15, 8.43], p = 0.024 ) . Conclusion Understanding how CSF dynamics affect plasma biomarkers is critical for implementation. The relationship between lower Aβ42 and DESH is expected based on prior CSF studies, which can be addressed by using an amyloid ratio. p ‐tau217 shows robustness against DESH, making it a suitable biomarker in cases of abnormal cerebrospinal fluid dynamics although validation in a more severe CSF dynamics group is warranted.

Abstract Background The objective of this study was to determine the predictive value of amyloid‐PET versus plasma %p‐tau217 (defined as the ratio of phosphorylated to non‐phosphorylated Tau217 × 100), Aβ42/40, and the amyloid probability score (APS2; which combines of Aβ42/40 and %p‐tau217) in tau‐PET transitions (T‐ to T+). Method Participants included were from the Mayo Clinic Study of Aging (MCSA) and had plasma markers measured by mass spectrometry (IP‐MS; C2N), had an amyloid‐PET scan, and had a tau‐PET negative scan (SUVR<1.29, temporal meta‐ROI) at the baseline, along with one or more follow‐up tau‐PET scans. Cox proportional hazard models were used to evaluate the relationship between C2N plasma %P‐Tau217 and APS2 and incident tau‐PET positivity (SUVR>=1.29) adjusting for age, sex, and APOE ε4. An analysis was also performed using amyloid‐PET centiloid as the predictor. Both the plasma markers and amyloid‐PET centiloid were scaled so that a one‐unit change corresponds to the respective interquartile range (IQR) for comparability of hazard ratios (HR). The analyses were repeated in the BioFINDER‐2 cohort for validation. Result 255 MCSA participants (122 female [47.8%] were included with a median age of 71.9 (IQR: 65.8, 78.8) years old, of which 37 progressed to tau‐PET positivity. At baseline, 238 (93.7%) were cognitively unimpaired. Higher baseline %p‐tau217 (HR: 1.52 [95% CI: 1.28, 1.8]), amyloid‐PET centiloid (HR: 1.47 [95% CI: 1.20, 1.79]), and APS2 (HR: 1.62 [95% CI: 1.22, 2.16]) were associated with an increased risk of progressing to tau‐PET positive (Figure 1). Aβ42/40 (HR: 1.06 [95% 0.604–1.867] was not associated with incident tau positivity Among 605 participants who were tau negative at index date in BioFINDER‐2 (316 (52.2%) cognitively unimpaired), with a median age of 70.2 (IQR: 60.5‐76.4), 33 progressed to tau positivity with higher %p‐tau217 (HR: 1.8 [95% CI: 1.5, 2.17]), amyloid‐PET centiloid (HR: 2.3 [95% CI: 1.77, 2.97]), and lower Aβ 42/40 (HR: 0.42 [95% CI: 0.21, 0.85]) at index date all associated with an increased risk of progressing to tau‐PET positive. Conclusion In two independent cohorts , %p‐tau217 provides predictive information about those who will convert from tau negative to tau positive on PET scan with the associations being similar to amyloid‐PET.

Abstract Background Some data suggest that neuroinflammation may be associated with pro‐inflammatory states in the body. Systemic, proinflammatory cytokines (TNFα, IL‐1, IL‐6, etc.) are produced by a variety of comorbidities. Neuroinflammation has been shown to be associated with the accumulation of amyloid in the brain (Becher, Heneka). We hypothesized that systemic cytokine production could be associated with neuroinflammation and thereby be related to brain amyloid accumulation. This study aims to evaluate the relationship between neuroinflammation, amyloid accumulation and systemic cytokines. Method 90 participants from the Mayo Clinic Study of Aging (MCSA) received a fasting cytokine panel over a 5‐year span where IL‐1, IL‐6, IL‐10, TNFa levels were measured. Participants were divided into four groups: cognitively unimpaired with normal levels of amyloid (CU A‐, n = 25), cognitively unimpaired with elevated amyloid (CU A+, n = 25), and mild cognitively impaired (MCI) with amyloid positive (MCI A+, n = 25), and Alzheimer's disease (AD) with elevated amyloid (AD A+, n = 15). To compare regional standardized uptake value ratio (SUVr) from neuroinflammation PET based on amyloid status (A+ vs A‐) and the four cytokines, Spearman's rank correlation and Fishers r‐to‐z transformations were used to assess pairwise group differences. Result Using Spearman's rank correlation and Fishers r‐to‐z transformations, no strong relationship was found between systemic inflammation and neuroinflammation. While comparing CUA‐ vs CUA+ in Figure 1, three regions (supplementary motor area, frontal superior medial lobe, and middle cingulate cortex) showed a significant difference ( p < 0.05). However, Figure 2 showed an overarching trend bias towards significance across most regions in IL10, IL6, and TNFa. Conclusion Although significant relationships between systemic inflammation, brain amyloid and neuroinflammation were limited, the data show an overarching trend bias in broad brain regions, suggesting that further analyses are needed, possibly with larger sample sizes, to assess the relationship of regional neuroinflammation and amyloid to systemic inflammation. Future analyses could also regress out factors like sex, age, and genotype to further proinflammatory cytokine research.

Abstract Background Cognitive resilience is the discrepancy in individuals with intermediate to high Alzheimer's disease neuropathologic change (ADNC) and normal cognition. Currently, the role of microglial activation in cognitive resilience is understudied. Method In the MCSA brain bank, high‐cognitively unimpaired (high‐CU) participants were defined as those performing in the upper quartile of their respective age groups based upon antemortem global cognition z‐scores, computed from memory, language, executive function, and visuospatial domain z‐scores. From the high‐CU group ( N = 118, global z‐scores from 1.55 to 1.78), cognitively resilient (CR) individuals were identified as those with intermediate to high ADNC upon neuropathologic evaluation. First, regression models were fit to evaluate global cognition as a function of age, sex, amyloid PET, and microglial‐specific genes of interest, including MS4A gene cluster SNPs. Second, a subset of CR participants was analyzed for postmortem ARM expression in the dorsolateral prefrontal cortex. Single immunohistochemistry was performed on formalin‐fixed, paraffin‐embedded sections using antibodies against beta‐amyloid (6F3D) and CD163 (10D6). Digital image analysis was performed on scanned sections (40x, Leica Aperio GT 450), and ARM (CD163%area) and beta‐amyloid (%area) measurements were obtained using QuPath. Cognitively impaired (CI) control group was matched on age, sex, ADNC level, and APOE4 status. Spearman correlations were performed between postmortem ARM and antemortem MRI, PET, plasma, and global cognition metrics. Result A third (39/118) of high‐CU cases showed intermediate/high ADNC (CR group). Furthermore, 28% of CR individuals harbored an MS4A6A SNP, which showed a protective effect on cognition via amyloid‐PET ( p = 0.043, Figure 1). Moreover, CR individuals harbored significantly higher ARM:amyloid than the CI group ( p <0.001, Figure 2) and fewer neuritic plaques ( p = 0.03, Figure 3). Antemortem white matter hyperintensities and global cognition were significantly correlated to ARM expression (r=0.556 [p=0.042] and r=0.648 [p=0.02], respectively). Conclusion Microglial specific MS4A6A SNP, which modulates microglial activation, was seen in a third of CR individuals. Postmortem analyses in CR individuals revealed increased ARM:amyloid, which was also associated with higher antemortem cognitive performance. These findings underscore the role of microglial activation in cognitive resilience. Future work is needed to investigate microglial protective mechanisms and links between vascular disease and microglial activation.

Abstract Background Neuropathologic evaluation is essential for diagnosing and treating dementia, but definitive diagnoses is only available after post‐mortem brain autopsy. Positron emission tomography (PET) offers a potential in vivo proxy for predicting neuropathology. This study proposes a semi‐supervised learning (SSL) model using a single FDG‐PET image to predict underlying neuropathology. Method The SSL model leverages a self‐organized graph structure based on a patient similarity network (PSN) created from 1,495 FDG‐PET images across the aging and neurodegenerative spectrum. Each patient is represented by a node, with edges indicating image similarity derived from principal component analysis features and cosine similarity weights. The PSN structure connects 20 nearest neighbors. Neuropathologic labels were available for 204 autopsied patients. The Poisson Learning Method was employed to propagate labels from these annotated nodes to unlabeled nodes, guided by the PSN structure. FDG‐PET images were collected from clinical and research participants at the Mayo Clinic and processed using an MRI‐free pipeline. Neuropathologic labels were assigned based on widely accepted diagnostic criteria. Leave‐one‐out cross‐validation (LOOCV) was used to assess model performance. Results The confusion matrix demonstrated high accuracy in predicting Alzheimer's disease, frontotemporal lobar degeneration with tau inclusions, and Lewy body disease pathology. A Sankey diagram and label distribution analysis revealed strong correlations between clinical and predicted neuropathologic labels. Conclusion This study highlights the potential of a graph‐based SSL pipeline to predict neuropathological changes using FDG‐PET imaging data, despite limited pathology labels. The findings underscore the value of SSL in bridging the gap between abundant neuroimaging data and scarce neuropathologic labels, contributing to improved dementia diagnosis and understanding.

Abstract Background Alzheimer’s Disease (AD) progression is conceptualized as a cascade of sigmoidal (S‐shaped) curves, with biomarkers shifting sequentially from normal to abnormal states. Estimating these curves requires sophisticated modeling, with challenges including (1) selecting appropriate sigmoidal‐type functions, (2) achieving algorithmic convergence, and (3) producing clinically useful parameters. We compare commonly used sigmoidal‐functions and effects on novel estimates of early and late AD‐biomarker progression ages. Method Using 3,999 Amyloid PET (PiB SUVR) measurements from 1,367 Mayo Clinic Study of Aging participants, we compared model fits (AIC, BIC) between logistic and hyperbolic functions using Non‐Linear Mixed Effect (NLME) models with subject‐specific age‐shifts. We defined novel “initial” and “maximum” acceleration points (IAP and MAP) to compare clinically “earlier” and “later” AD‐progression ages between sigmoidal‐curves. The MAP uses the maximum second‐derivative point, reflecting the age of fastest acceleration in biomarker accumulation. The IAP is defined as the first point where the second derivative of the sigmoidal‐curve exceeds a clinical threshold (here, 5% velocity increase per year), indicating onset age of early accelerated biomarker accumulation. Estimates for C 2 N plasma p ‐tau217 were also attempted (1,306 measurements on 457 participants). Models adjusted for sex and APOE4‐positivity. Result In the larger PET sample, the hyperbola had lower AIC/BIC (better fit), but showed a decreasing early PiB‐SUVR trend (Table 1A, Figure 1). Ages of late MAP were comparable, as were sex and APOE4+ related PiB‐SUVR‐curve shifts. Age of early AD‐onset was estimated 1.5 years earlier for logistic (IAP=63.6) versus hyperbola (IAP=65.1) functions. The logistic function always converged, while the hyperbolic function did not converge for p ‐tau217 in the smaller C 2 N sample. Early‐onset and late‐progression ages were 7‐8 years later for p ‐tau217 versus PiB‐SUVR using logistic‐curves. Conclusion Late AD‐progression and covariate‐related shifts in progression were comparable across models, suggesting robustness to sigmoid choice. In contrast, estimates of early AD‐onset may be more dependent on functional form. While logistic‐sigmoids inherently increase monotonically, hyperbolas do not, here estimating a decline in initial amyloid trend. Future work may explore adding biologically informed constraints to flexible sigmoidal‐functions, and alternative Bayesian approaches, to optimize both model fit and estimation of early AD‐onset age.

Abstract Background Dementia with Lewy Bodies (DLB) has been overlooked or misdiagnosed as Alzheimer’s disease (AD) dementia due to its frequent concomitant AD pathology with Lewy Body Disease (LBD) pathology. Although autopsy confirmation has been the gold standard for the precise diagnosis of DLB, time‐course 123 I‐FP‐CIT SPECT (DaT‐SPECT) findings in autopsy‐confirmed DLB are not well characterized. We previously reported that the DaTQUANT z‐score of the more affected side of the putamen has the best discriminatory power in detecting LBD pathology and nigrostriatal degeneration in dementia patients and demonstrated z‐score of −1 as the cutoff value. We sought to examine how DaT‐SPECT findings change over time in autopsy confirmed LBD patients in preparation for its use in LBD targeted clinical trials. Method Eight autopsy confirmed neocortical or limbic LBD patients who underwent two or more DaT‐SPECT were included. Nigrostriatal dopamine transporter (DaT) binding and age‐adjusted z‐scores were analyzed using the DaTQUANT 2.0 software (GE Healthcare). Result Six patients (75%) were male. The patients had 2.5±0.7 longitudinal DaT‐SPECT scans. Clinical diagnosis at initial scan was: DLB (75%), mild cognitive impairment (MCI) with REM sleep behavior disorder (RBD) (13%), and isolated RBD (iRBD) (13%). Clinical diagnosis at last scan was: DLB (88%) and iRBD (12%). All patients developed dementia during life. Mean age at initial scan/last scan/autopsy were 71.1±7.0/73.4±6.9/75.1±7.3 years old. Time from initial and last scan to autopsy were 4.0±1.9 and 1.8±1.9 years respectively. Seven patients (88%) had neocortical LBD and one (12%) had limbic LBD. Concomitant AD pathology was observed in four patients (two males (33%), two females (100%)). All patients had DaTQUANT putamen z‐score <‐1.0 at their initial scan including in MCI+RBD (‐1.76) and iRBD (‐1.53) patients. In the DLB patients at their initial scans, five (83%) had DaTQUANT putamen z‐score <‐2.0 and one (17%) had z‐score of ‐1.55. All patients (100%) showed DaTQUANT putamen z‐score <‐2.0 at their last scans. Conclusion DaTQUANT using cut‐off putamen z‐score of ‐1 was associated with underlying LBD pathology including at their iRBD and MCI stages. Nigrostriatal DaT binding tends to decline over time with DaTQUANT z‐score <‐2 at their last scans.

Abstract Background Cerebral amyloid angiopathy (CAA), characterized by the accumulation of amyloid‐beta in the cerebrovasculature, affects blood vessel integrity leading to brain hemorrhages and an accelerated cognitive decline in Alzheimer’s Disease (AD) patients. Our previous genome‐wide association study (GWAS) identified a LINC‐PINT splice variant associated with lower CAA levels in individuals without the APOE e4 allele and higher levels of LINC‐PINT expression in the brain of AD donors. In this study, we expand our GWAS to include additional donors with AD and those lacking significant AD neuropathology (non‐AD), with available CAA scores. Method In our prior study we assessed 853 AD donors. We expanded this by addition of genetic data from 550 AD and 502 non‐AD donors from the Mayo Clinic Brain Bank, scored for CAA. We performed QC and imputation (TOPMED) of all datasets. We conducted GWAS in AD only ( N = 1,363), non‐AD only, and all donors ( N = 1,865) by testing imputed variant dosages for association with square root transformed CAA using linear regression, adjusting for relevant covariates. To assess associations in the context of major CAA risk factors, we performed interaction analysis with APOEe4 presence and sex; and pursued stratified analyses. Result Variants at the APOE locus were identified as the most significant in our study. In addition, several other variants approached genome‐wide significance after adjusting for AD neuropathology (Braak stage and Thal phase). T he LINC‐PINT splice variant remained associated with lower CAA scores in AD donors without the APOEe4 risk allele. To enhance the robustness of our findings, we are pursuing further expansion of our study cohort to include other available datasets. To explore putative functional consequences of key variants we are collecting peripheral gene expression measures in participants from Mayo Clinic with neuroimaging measures including microhemorrhages. Conclusion We expect this study will provide further insights into the genetic architecture underlying risk for CAA, both in the context of significant AD pathology, and without. Characterization of genetic variants and their functional outcomes may lead to new avenues of research aimed at identifying biomarkers and therapies to treat CAA, a common co‐pathology in those with and without AD.

Abstract Background Use of software to “de‐face” research brain images has grown as advances in automated face recognition have made it increasingly possible to re‐identify participants. Imaging studies of Alzheimer’s Disease and related diseases have included more participants from historically underrepresented groups, but de‐facing software have primarily been validated using images from mostly non‐Hispanic White participants, and its performance has not been directly compared across ethnoracial groups. Method From The Health and Aging Brain Study: Health Disparities (HABS‐HD) study, we constructed a sample of 305 T1‐weighted MRI from HABS‐HD baseline visits, matched across three ethnoracial groups (non‐Hispanic White (NHW, n = 104), non‐Hispanic African American (AA, n = 104), Mexican American (MA, n = 97)) according to age‐decade, sex, cognitive status (impaired/unimpaired), and MRI scanner model. We ran mri_reface 0.3.5 on each image, and we ran FreeSurfer 7.4.1 on each unmodified image and on each de‐faced output. We then compared regional gray matter (GM) volume and cortical thickness measurements by subtracting each de‐faced image measurement from the corresponding unmodified image measurement. We compared these differences between de‐faced and unmodified images across the three matched groups using GLM analyses adjusted for age, sex, and cognitive status, and Bonferroni corrected. Result When aggregating across all brain regions, differences in cortical thickness measures due to de‐facing were significantly different between the NHW and MA groups, and between AA and MA, but not between NHW and AA (Figure 1). Differences between these group means were <0.005mm. For GM volume, differences were significant between AA and MA (magnitude < 0.2%), but not between NHW and AA or NHW and MA (Figure 2). Examining each region individually (Figure 3), cortical thickness differences were significant for only 4 regions (all with magnitudes <0.03mm), and GM volume differences were significant for only 6 regions (all with magnitudes <2%). Conclusion Effects of mri_reface on FreeSurfer brain measurements were significantly different across ethnoracial groups. Our future work will optimize mri_reface to eliminate these differences. However, the magnitudes of these differences are sufficiently small that they are unlikely to have a practical effect on analyses of data using current versions.

Abstract Background Diffusion MRI (dMRI) measures are increasingly being used as biomarkers for aging and dementia in multi‐center studies. Measurements in longitudinal studies are often acquired on different systems, which can result in systematic differences of machine origin (e.g. vendor, hardware, algorithms). This may warrant harmonization prior to pooling multi‐site data. However, harmonization algorithms may introduce a risk of removing valuable information content and reducing sensitivity to physiological factors (e.g. sex, age, disease). Here, we tested the hypothesis that protocol standardization may minimize machine‐origin differences, obviating a need for post‐acquisition harmonization in a two‐site (Mississippi‐MS and Minnesota‐MN) cohort of the longitudinal Mayo Clinic Study of Aging (MCSA). Methods Two data sets were analyzed: first, a crossover dataset with 80 participants (scanned within 2 days) bridging two different protocols on GE and Siemens scanners; second, participants scanned using standardized protocols from the ongoing MCSA ( N MN‐MCSA =204; N MS‐MCSA =52). Parameters are listed in Figure 1. For crossover data, analyses were repeated with GE data resampled to 2‐mm isotropic resolution, and discarding Siemens‐only b‐shells to artificially reduce protocol disparities. Analysis encompassed visualization of overlain subjectwise histogram‐derived densities obtained from whole‐brain masks for dMRI measures; and median dMRI measures from within the genu of the corpus callosum (GCC) with nonparametric statistical testing. When available, both DTI and NODDI measures were compared. Results Pronounced visual distributional differences seen between MD and FA in crossover data were reduced with resampling of GE data and including only b‐shells shared across acquisitions. For the resampled/reshelled data, significant differences remained for all GCC‐FA comparisons, but not all GCC‐MD (Figure 2). For the ongoing MCSA data from two sites, MD and FA whole‐brain densities were more closely aligned, with GCC‐FA and GCC‐MD showing no significant differences (Figure 3). NODDI measures showed more discordant densities than DTI measures, including shifts in most probable values and differences in distributional arrangement. Conclusions Our work provides further evidence supporting protocol and processing standardization for minimizing machine‐origin differences prior to considering harmonization. Differences in dMRI metrics seen when comparing across unstandardized protocols were reduced when protocols were standardized. NODDI metrics had more apparent sensitivity to site than DTI measures.