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Eirin, Alfonso

https://orcid.org/0000-0002-3864-9644

Mayo Clinic

Mayo Clinic

Citations 128

Renal single-nucleus transcriptomic of a new model of cardiovascular-kidney-metabolic syndrome in aging swine
Eirin, Alfonso , Sivasankaran, Sathesh K., Sitz, Rhys , McCarthy, Elizabeth A. , Martin, Samuel Anthony , Chade, Alejandro , Chade, Alejandro R , Eirin, Alfonso , Sivasankaran, Sathesh K. , McCarthy, Elizabeth A.

American Journal of Physiology-Renal Physiology | August 28, 2026 | Volume: 331 | Issue: 4 | Pages: F600-F611

10.1152/ajprenal.00168.2026 Get It

Cardiovascular-kidney-metabolic (CKM) syndrome is a complex disease that affects up to 90% of US adults. This work characterized the renal transcriptomic landscape of a novel model of CKM in aging swine. The cardiovascular, renal, and metabolic parameters in pigs are very similar to those in humans, and our work may guide future studies aimed at modulating specific age-related renal abnormalities in CKM to slow disease progression and reduce mortality.
Renovascular disease induces functionally relevant, locus-specific alterations to DNA methylation and hydroxymethylation in swine scattered tubular-like cells
Iyer, Vinaya C., Shivam, Kumar, Kazeminia, Sara , Zhu, Xiang-Yang, Tang, Hui, Xue, Ailing, Chade, Alejandro , Lerman, Lilach O. , Herrmann, Sandra, Irazabal, Maria V , Lerman, Lilach O , Eirin, Alfonso , Kazeminia, Sara , Herrmann, Sandra M. , Irazabal, María V. , Eirin, Alfonso

American Journal of Physiology-Renal Physiology | July 2, 2026 | Volume: 331 | Issue: 2 | Pages: F213-F224

10.1152/ajprenal.00055.2026 Get It

Scattered tubular-like cells (STCs) are dedifferentiated renal tubular cells that repair other damaged kidney cells. This study shows that renovascular disease (RVD) induces site-specific 5-methylcytosine (5mC) and 5-hydroxymethylcytosine (5hmC) modifications in DNA associated with transcriptional changes and impaired proliferative capacity of swine STCs, which could be mitigated in RVD-STCs treated with an epigenetic modulator. Therefore, our observations may contribute to the development of novel approaches to preserve the reparative capacity of STCs in individuals with RVD.
Rescuing of cardiac VEGF signaling via targeted inhibition of miR-452-5p improves cardiac hemodynamics and microvascular rarefaction in a novel swine model of CKM syndrome
MARTIN, SAM, McCarthy, Elizabeth, Sitz, Rhys , Chade, Alejandro, Eirin, Alfonso , Chade, Alejandro

Physiology | May 12, 2026 | Volume: 41 | Issue: S1 | Pages: No page available

10.1152/physiol.2026.41.s1.2299973 Get It

Background: Cardiovascular-Kidney-Metabolic (CKM) syndrome entails pathophysiological interactions leading to multiorgan dysfunction and a high rate of cardiovascular morbidity and mortality, largely driven by the development of heart failure (HF). Mechanisms leading to HF in CKM syndrome are unknown. We created a model of CKM syndrome in swine and showed that cardiac abnormalities associate with cardiac microvascular (MV) rarefaction and decreased expression and availability of VEGF. Emerging research focuses on micro-RNAs (miRNAs) and their role in the pathophysiology of HF, but whether they play a role in the development of cardiac injury in CKM syndrome via VEGF modulation has not been investigated. We aimed to identify specific miRNAs that can target VEGF to test the hypothesis that their direct cardiac inhibition will rescue cardiac VEGF, improve angiogenic signaling, and cardiac hemodynamics in CKM syndrome. Methods: CKM (bilateral renal artery stenosis+high-cholesterol/high-carbohydrate feeding) and normal pigs (n=4 each, 2 males/2 females) were studied for 14 weeks. Unbiased micro-RNA sequencing identified 26 miRNAs differentially expressed in CKM pig hearts, of which only miR-452-5p can target VEGFA, which was confirmed by pulldown analysis and qPCR. In addition, CKM (n=4, 2 males/2 females) were treated after 6 weeks with a single intracoronary (IC) administration of a miR-452-5p inhibitor (antagomiR). Cardiac hemodynamics (echocardiography), MV architecture (3D micro-CT) and cardiac expression of VEGF and miR-452-5p (RT-qPCR) were quantified before IC miR-452-5p inhibition, and again at the end of the study (14 weeks). Results: Pigs with CKM syndrome showed blunted diastolic relaxation, increased cardiac remodeling, and reduced subendocardial MV density and cardiac VEGF expression, accompanied by higher cardiac expression of miR-452-5p compared to normal pigs. Notably, most of these parameters were improved after in vivo IC miR-452-5p inhibition (single dose). Blood pressure was unchanged ( Table 1 ). Conclusions: Our study supports a role for VEGF in preserving cardiac MV integrity in CKM syndrome. Also, it identifies a targeted post-transcriptional regulation of VEGF via miR-452-5p and supports the feasibility and efficacy of its mechanistic modulation in vivo. The predictive power of our model conceptually supports the potential of a novel targeted intervention to protect the heart in CKM syndrome. [Table: see text] Support: NIH AG084154 (ARC), and DK129240 (AE) This abstract was presented at the American Physiology Summit 2026 and is only available in HTML format. There is no downloadable file or PDF version. The Physiology editorial board was not involved in the peer review process.
TNF-α blockade mitigates immune checkpoint–related nephritis in a humanized mouse model
Narvaez, Victor D Cuenca, Chavez, Coraima Nava, Refai, Omar Al, Gutierrez, Luis E., Zhang, Song, Li, Xiaoyan, Hirdler, Jacob B. , Romero, Michael F. , Herrmann, Joerg, Li, Xiaogang, dong, Haidong, Eirin, Alfonso, Herrmann, Sandra M., Romero, Michael F , Chavez, Coraima Claudia Nava , Jacobs, Johanna E.J., Herrmann, Joerg , Dong, Haidong , Eirin, Alfonso , Herrmann, Sandra M.

JCI Insight | March 5, 2026 | Volume: 11 | Issue: 8 | Pages: No page available

10.1172/jci.insight.199694 Get It

Immune checkpoint inhibitors (ICIs) can cause immune-related adverse events (irAEs), with acute interstitial nephritis (ICI-AIN) being the most common irAE. While the exact mechanism remains unclear, upregulation of IFN-γ and TNF-α pathways has been implicated. This study used a humanized chimeric PD-1/PD-L1 mouse model to assess renal effects of ICIs, alone or combined with proinflammatory cytokines, and to test if selective TNF-α blockade could prevent ICI-AIN. Mice were randomly divided into 4 experimental groups: Control, ICI-Only, ICI-Cytokines (ICI-Cyt), and ICI-Block (ICI-TNF-α blockade). Renal function and cytokine profiles were assessed, while kidney tissue was analyzed using microscopy and single-cell RNA-seq. Histology revealed increased renal infiltration of CD4 + /CD8 + T cells in ICI-treated groups and decreased TNF-α expression following TNF-α blockade. Additionally, kidney tissue ELISA demonstrated reduced IFN-γ levels following TNF-α blockade. Plasma IL-6, MCP-1, and TNF-α were lower in ICI-Block mice. Single-cell RNA-seq revealed shifts in immune cell populations and genes of interest including Bcl2a1 , Icos , Il18r1 , Ccr2 , and Jaml . This humanized model replicates ICI-AIN key features, revealing a synergistic role of ICIs and proinflammatory cytokines. TNF-α blockade demonstrated protective effects, supporting its potential role in mitigating the risk of ICI-AIN.
Vascular transcriptional and metabolic changes precede progressive intrarenal microvascular rarefaction in autosomal dominant polycystic kidney disease
Yilmaz, Gizem, Singha, Santu K., Savaliya, Bansi, Abdelfattah, Ahmed, Elsekaily, Walaa , Xu, Xiaohong , Zhang, Y., Hanna, Christian , Hogan, Marie C. , Chade, Alejandro , Eirin, Alfonso, Abd-Elfattah, Ahmed Saleh , Abdelfattah, Ahmed , Zhang, Youwen, Eirin, Alfonso , Irazabal, Maria V , Hanna, Christian , Hogan, Marie C , Eirin, Alfonso , Irazabal, María V.

American Journal of Physiology-Renal Physiology | February 5, 2026 | Volume: 330 | Issue: 3 | Pages: F326-F345

10.1152/ajprenal.00266.2025 Get It

We provide the first longitudinal and most comprehensive analysis of the intrarenal microvasculature in a slowly progressive model of autosomal dominant polycystic kidney disease (ADPKD) and integrate the findings with studies in a young cohort of individuals with ADPKD. We identified vasculature-related pathways that could be targeted for therapeutic interventions and contribute promising, noninvasive biomarkers in patients with ADPKD. Alterations of the intrarenal microcirculation may affect drug delivery; a better understanding of its longitudinal changes may aid in treatment management.
The Renal Micro-RNA Expression Profile of Pkd1 RC/RC Mice Changes Longitudinally with the Progression of the Disease
Sharma, Nalin , Zheng, Jamie , Alsawaf, Yahya , Singha, Santu K., Xu, Xiaohong , Zhang, Youwen, Vučković, Ivan , Macura, Slobodan , Hanna, Christian , Hogan, Marie C. , Eirin, Alfonso, Sharma, Nalin , Eirin, Alfonso , Irazabal, Maria V , Macura, Slobodan I , Hanna, Christian , Vuckovic, Ivan , Alsawaf, Yahya , Hogan, Marie C , Eirin, Alfonso , Irazabal, María V.

Kidney360 | January 2, 2026 | Volume: 7 | Issue: 6 | Pages: 1212-1226

10.34067/kid.0000001108 Get It

Key Points Experimental autosomal dominant polycystic kidney disease is associated with longitudinal changes in the kidney micro-RNA and mRNA profiles. Alterations in cellular transport, a feature of CKD, and a common biological process within polycystic kidney disease models and human autosomal dominant polycystic kidney disease, is present from early stages. Early versus late micro-RNA expression changes in autosomal dominant polycystic kidney disease could be targeted for a more tailored therapeutic intervention in the disease. Background Autosomal dominant polycystic kidney disease (ADPKD) is characterized by the progressive development and enlargement of bilateral kidney cysts, which often leads to kidney failure. This study comprehensively characterized the expression profile of micro-RNAs (miRNAs) and their target genes in Pkd1 RC/RC mice and further compared them with other murine models of polycystic kidney disease (PKD) and a model of CKD and individuals with ADPKD. Methods Pkd1 RC/RC and wild-type (WT) mice ( n =10 each, five males and five females) were studied at 1, 6, and 12 months. At each time point, kidney volume was determined in vivo (magnetic resonance imaging), followed by ex vivo histomorphometric analyses. In randomly selected Pkd1 RC/RC and WT mouse kidneys ( n =5/genotype, at 1 and 12 months), miRNA-sequencing (seq) was performed, followed by mRNA-seq, integrated (miRNA-seq/mRNA-seq analysis), and functional analysis of miRNA target genes. Venn diagrams were constructed to identify overlapping and novel differentially expressed (DE) miRNAs in Pkd1 RC/RC and other commonly used murine models of PKD, diabetic kidney disease, and individuals with ADPKD. Results miRNA-seq analysis identified 41 and 181 miRNAs DE in Pkd1 RC/RC versus WT kidneys at 1 and 12 months, respectively, which were confirmed by quantitative PCR. Target genes of miRNAs DE in Pkd1 RC/RC at early stages encoded for proteins mainly implicated in cell proliferation and α -ketoglutarate ( α -KG) transport, whereas those DE at late stages encoded for transport proteins involved in proinflammatory and metabolic processes. Urine α -KG concentration ( 1 H nuclear magnetic resonance spectroscopy), its fractional excretion, and tissue levels were higher in Pkd1 RC/RC during the entire course of the disease and associated with decreased protein expression of α -KG transporters sodium-coupled dicarboxylate transporter 3 and organic anion transporter 1. We further identified common DE miRNAs among murine models of PKD, diabetic kidney disease, and previous reports in individuals with ADPKD, as well as several novel miRNAs DE in early and late Pkd1 RC/RC kidneys, which have not been previously reported in either other murine models of PKD or patients with ADPKD. Conclusions Our study demonstrates that the renal miRNA expression profile changes longitudinally with the progression of the disease and might suggest that the post-transcriptional regulation of α -KG transport could represent a novel early feature of the disease.
Ultrasound Localization Microscopy to Assess the Intrarenal Microvasculature in Autosomal Dominant Polycystic Kidney Disease
Huang, Chengwu , Abd-Elfattah, Ahmed Saleh , DeRuiter, Ryan M. , Zhang, Nathan , Knoll, Kate M , Petersen, Kendra E. , Wu, Tao , Hogan, Marie C. , Eirin, Alfonso , Lerman, Lilach O. , Irazabal, María V. , Abdelfattah, Ahmed , Zhang, Youwen, Hogan, Marie C , Eirin, Alfonso , Lerman, Lilach O , Irazabal, Maria V , Huang, Chengwu , DeRuiter, Ryan , Petersen, Kendra E , Zhang, Nathan , Zhang, Youwen , Chen, Shigao

Journal of the American Society of Nephrology | December 9, 2025 | Volume: 37 | Issue: 6 | Pages: 1221-1236

10.1681/asn.0000000968 Get It

Key Points The kidney microvasculature was quantified reliably in human autosomal dominant polycystic kidney disease early on, using super-resolution ultrasound localization microscopy. Microvascular parameters correlated with structural and functional indices, constituting promising biomarkers to evaluate noncystic parenchyma. Microvascular parameters may serve to assess disease severity and monitor progression from the early stages of the disease. Background In vitro studies in individuals with autosomal dominant polycystic kidney disease (ADPKD) have shown extensive intrarenal microvascular remodeling. However, analyses have been limited to the time of kidney failure because of the invasive nature of current methodologies to assess the intrarenal microvasculature. We hypothesized that super-resolution ultrasound microvascular imaging, known as ultrasound localization microscopy, enabled by high-framerate ultrasound imaging and microbubble localization and tracking postprocessing techniques, would safely, reliably, and reproducibly assess the intrarenal microvasculature in individuals with ADPKD at an early stage of the disease. Methods We prospectively enrolled young (<40 years of age), well-characterized, early-stage (eGFR >90 ml/min per 1.73 m 2 ) individuals with ADPKD, and sex–age 1:1 matched controls ( n =17 each) and assessed the intrarenal microvasculature using ultrasound localization microscopy. We determined the intersonographer reliability, intraobserver repeatability, and interobserver reproducibility of microvascular parameters in both groups, and the day-to-day variability in the control group. Microvascular parameters were correlated with structural (total kidney volume) and functional (eGFR) markers in individuals with ADPKD. Results Ultrasound localization microscopy provided a super-resolved map of the intrarenal microvasculature in ADPKD and matched controls. Intrarenal microvascular parameters ( e.g ., vessel density) were quantified in a safe, reliable (intraclass correlation coefficients, 0.96; 95% confidence interval, 0.91 to 0.98), reproducible (intraclass correlation coefficient, 0.96; 95% confidence interval, 0.93 to 0.98), and repeatable (coefficient of variations, 3.6%) manner. In control individuals, the day-to-day variability of most parameters was low, with coefficient of variation ranging from 1.8% to 10.7%. Microvascular parameters differed in individuals with ADPKD compared with controls, despite preserved eGFR. Interestingly, cortical vessel density and its derived perfusion correlated directly with eGFR, whereas tortuosity indices presented an inverse correlation. Conclusions Ultrasound localization microscopy provided a safe and reliable in vivo assessment of the human intrarenal microvasculature.
Mechanisms of Cardiac Injury in Cardiovascular-Kidney-Metabolic (CKM) Syndrome: Inflammatory Signaling via miR-452-5p Downregulation of Cardiac NKIRAS1-NF-kB Signaling
Chade, Alejandro , Eirin, Alfonso

Journal of the American Society of Nephrology | December 1, 2025 | Volume: 36 | Issue: 10S | Pages: No page available

10.1681/asn.202593d3ck5r Get It

Systemic MOTS-c Levels Are Increased in Adults with Obesity in Association with Metabolic Dysregulation and Remain Unchanged After Weight Loss
Yoon, Se-Hee , Yuan, Fei , Zhu, Xiang, Tang, Hui , Lerman, Amir, Lerman, Lilach O. , Eirin, Alfonso , Lerman, Amir , Cohen, Pinchas

Journal of the American Society of Nephrology | December 1, 2025 | Volume: 36 | Issue: 10S | Pages: No page available

10.1681/asn.2025f05xxhks Get It

Single-Nuclear Transcriptomics Reveal Distinct Profibrotic Genes in Proximal Tubular and Endothelial Cells in a Novel Swine Model of CKD
Chade, Alejandro , Eirin, Alfonso

Journal of the American Society of Nephrology | November 24, 2025 | Volume: 36 | Issue: 10S | Pages: No page available

10.1681/asn.2025f1jvt3rw Get It