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Efficient Convolution Kernels for Computerized Tomography
Kenue, Surender K., Greenleaf, James F.

Ultrasonic Imaging | March 2, 2013 | Volume: 1 | Issue: 3 | Pages: 232-244

10.1177/016173467900100303 | PMID 575823 Get It

Three concepts are presented: 1) Extended kernels: The Ramachandran-Lakshminarayanan convolution kernel has one zero between each non-zero value in the spatial domain. By extending the kernel in Fourier space, it is shown that each extension leads to two additional zeros in the spatial domain of the convolution kernel, thus decreasing the required number of multiplications necessary for convolution. Any known kernel can be extended and in the limit of extension a simple backprojection reconstruction is obtained. 2) Binary kernels: A technique for generating binary approximations to any convolution kernel is described. Excluding the central element, all other elements of the kernel are approximated by an even power of two thus, multiplications are replaced by shift operations in the convolution procedure. 3) Recursive convolution: It is shown how additions can be saved by using a recursive formulation which generates new elements in the convolution procedure utilizing only a few summation steps. Results from both extended kernels and their binary approximations are described for simulated phantoms and ultrasound data obtained from breast scans of patients.
Efficacy and safety of oral prucalopride in women with chronic constipation in whom laxatives have failed: an integrated analysis
Tack, Jan , Camilleri, Michael , Vandeplassche, Lieve, Kerstens, René, Quigley, Eamonn M.M. , Tack, Jan

United European Gastroenterology Journal | March 2, 2013 | Volume: 1 | Issue: 1 | Pages: 48-59

10.1177/2050640612474651 | PMID 24917940 Get It

BackgroundPrucalopride is a selective, high‐affinity, 5‐hydroxytryptamine (serotonin) type 4 (5‐HT4) receptor agonist with gastrointestinal prokinetic activities. This integrated analysis of data from three double‐blind phase III trials (ClinicalTrials.gov: NCT00488137, NCT00483886, NCT00485940) compared the efficacy and safety of prucalopride 2 mg once daily in women with chronic constipation [≤2 spontaneous complete bowel movements (SCBM) per week] in whom laxatives had failed to provide adequate relief with that in the all‐patient (AP) population of men and women with chronic constipation who had or had not obtained relief from laxatives.MethodsPatients received prucalopride 2 mg or placebo once‐daily for 12 weeks. Efficacy endpoints included an average of ≥3 SCBM/week and average increases of ≥1 SCBM/week and ≥1 SBM/week over this period. A response on any of these three endpoints was considered to be clinically relevant, and an overall response rate was derived for patients satisfying any of these endpoints.ResultsOf the AP population (n = 1318), 936 were women in whom laxatives had failed to provide adequate relief (WLF). More patients on prucalopride 2 mg than placebo had an average of ≥3 SCBM/week (AP 24.4 vs 11.0%; WLF 24.7 vs 9.2%), an average increase of ≥1 SCBM/week (AP 43.5 vs 24.8%; WLF 44.2 vs 22.6%), and an average increase of ≥1 SBM/week (AP 66.7 vs 38.4%; WLF 68.3 vs 37.0%) (all p < 0.001). Significant differences from placebo were evident in week 1 and sustained thereafter. Overall response rates in the AP and WLF populations, respectively, were 69.7 and 71.0% with prucalopride 2 mg and 44.5 and 41.6% with placebo (p < 0.001). Early (weeks 1–4) response predicted ultimate response over time. Common (>10%) adverse events were abdominal pain, nausea, diarrhoea, and headache.ConclusionsPrucalopride 2 mg once daily is effective in WLF. The efficacy and safety profile observed in WLF was similar to that in the total evaluated population of patients with chronic constipation who had or had not obtained adequate relief from laxatives.
Population‐based trends in urinary diversion among patients undergoing radical cystectomy for bladder cancer
Kim, Simon P. , Shah, Nilay D. , Weight, Christopher , Thompson, R. Houston, Wang, Jeffrey K., Karnes, R. Jeffrey , Han, Leona C., Frank, Igor, Tollefson, Matthew K. , Boorjian, Stephen A. , Ziegenfuss, Jeanette Y.

BJU International | March 2, 2013 | Volume: 112 | Issue: 4 | Pages: 478-484

10.1111/j.1464-410x.2012.11508.x | PMID 23452020 Get It

What's known on the subject? and What does the study add? Variations in the type of urinary diversion exist for patients undergoing radical cystectomy. Although its use has been increasing from 2001 to 2008, patients who are older, female, and primary insured by Medicaid are less likely to receive continent diversions. Furthermore, patients treated surgically at high‐volume and teaching hospitals are more likely to receive continent diversions. Objective To describe the contemporary trends in urinary diversion among patients undergoing radical cystectomy ( RC ) for bladder cancer; and elucidate whether socioeconomic disparities persist in the type of diversion performed in the USA from a population‐based cohort. Patients and Methods Using the Nationwide Inpatient Sample, we identified patients who underwent RC for bladder cancer between 2001 and 2008. Multivariable regression models were used to identify patient and hospital covariates associated with continent urinary diversion and enumerate predicted probabilities for statistically significant variables over time. Results Overall, 55 635 (92%) patients undergoing RC for bladder cancer received incontinent urinary diversion, while 4552 (8%) patients received continent diversion from 2001 to 2008. Receipt of continent urinary diversion increased from 6.6% in 2001–2002 to 9.4% in 2007–2008 ( P < 0.001 for trend). Patients who were older (odds ratio [ OR ] 0.93; P < 0.001), female ( OR 0.52; P < 0.001) and insured by Medicaid ( OR 0.54; P = 0.002) were less likely to receive continent urinary diversion. However, patients treated at teaching ( OR 2.14; P < 0.001) and high‐volume hospitals ( OR 2.39; P = 0.04) had higher odds of continent urinary diversion. Predicted probabilities of continent diversion remained lower for female patients, Medicaid insurance status, and non‐teaching and medium/low‐volume hospitals over time. Conclusions In this nationally representative sample of hospitals from 2001 to 2008, the use of continent diversion in RC gradually increased. Although variations in urinary diversion exist by hospital teaching status, case volume, patient gender and primary health insurance, increased attention in expanding the use of continent diversions may help reduce these disparities for patients undergoing RC for bladder cancer.
Acceleration apportionment: A method of improved 2D SENSE acceleration applied to 3D contrast‐enhanced MR angiography
Weavers, Paul T., Borisch, Eric A. , Johnson, Casey P. , Riederer, Stephen J.

Magnetic Resonance in Medicine | March 1, 2013 | Volume: 71 | Issue: 2 | Pages: 672-680

10.1002/mrm.24700 | PMID 23450817 Get It

PurposeIn 2D SENSE‐accelerated 3D Cartesian acquisition, the net acceleration factor R is the product of the two individual accelerations, R = RY × RZ. Acceleration Apportionment tailors acceleration parameters (RY, RZ) to improve parallel imaging performance on a patient‐ and coil‐specific basis and is demonstrated in contrast‐enhanced MR angiography.MethodsA performance metric is defined based on coil sensitivity information which identifies the (RY, RZ) pair that optimally trades off image quality with scan time reduction on a patient‐specific basis. Acceleration Apportionment is evaluated using retrospective analysis of contrast‐enhanced MR angiography studies, and prospective studies in which optimally apportioned parameters are compared with standard acceleration parameters.ResultsThe retrospective studies show strong variability in optimal acceleration parameters between anatomic regions and between patients. Prospective application of apportionment to foot contrast‐enhanced MR angiography with an 8‐channel receiver array provides a 20% increase in net acceleration with improved contrast‐to‐noise ratio. Application to 16‐channel contrast‐enhanced MR angiography of the feet and calves suggests 10% acceleration increase to R > 13 and no contrast‐to‐noise ratio loss. The specific implementation allows the optimum (RY, RZ) pair to be determined within one minute.ConclusionOptimum 2D SENSE acceleration parameters can be automatically chosen on a per‐exam basis to allow improved performance without disrupting the clinical workflow. Magn Reson Med 71:672–680, 2014. © 2013 Wiley Periodicals, Inc.
Brief Report: Susceptibility to Childhood‐Onset Rheumatoid Arthritis: Investigation of a Weighted Genetic Risk Score That Integrates Cumulative Effects of Variants at Five Genetic Loci
Conneely, Karen N. , Jiang, Yunxuan , Sudman, Marc , Wallace, Carol A., Brown, Milton R., Ponder, Lori, Rohani‐Pichavant, Mina, Cutler, David J. , Angeles‐Han, Sheila T. , Vogler, Larry B., Kennedy, Christine, Rouster‐Stevens, Kelly , Wise, Carol A. , Punaro, Marilynn, Reed, Ann M., Mellins, Elizabeth , Bohnsack, John F. , Glass, David N., Thompson, Susan D. , Prahalad, Sampath , Zwick, Michael E.

Arthritis & Rheumatism | March 1, 2013 | Volume: 65 | Issue: 6 | Pages: 1663-1667

10.1002/art.37913 | PMID 23450725 Get It

ObjectiveChildren with childhood‐onset rheumatoid arthritis (RA) include those with rheumatoid factor or anti–citrullinated protein antibody–positive juvenile idiopathic arthritis. To test the hypothesis that adult‐onset RA–associated variants are also associated with childhood‐onset RA, we investigated RA‐associated variants at 5 loci in a cohort of patients with childhood‐onset RA. We also assessed the cumulative association of these variants in susceptibility to childhood‐onset RA using a weighted genetic risk score (wGRS).MethodsA total of 155 children with childhood‐onset RA and 684 healthy controls were genotyped for 5 variants in the PTPN22, TRAF1/C5, STAT4, and TNFAIP3 loci. High‐resolution HLA–DRB1 genotypes were available for 149 cases and 373 controls. We tested each locus for association with childhood‐onset RA via logistic regression. We also computed a wGRS for each subject, with weights based on the natural log of the published odds ratios (ORs) for the alleles investigated, and used logistic regression to test the wGRS for association with childhood‐onset RA.ResultsChildhood‐onset RA was associated with TNFAIP3 rs10499194 (OR 0.60 [95% confidence interval 0.44–0.83]), PTPN22 rs2476601 (OR 1.61 [95% confidence interval 1.11–2.31]), and STAT4 rs7574865 (OR 1.41 [95% confidence interval 1.06–1.87]) variants. The wGRS was significantly different between cases and controls (P < 2 × 10−16). Individuals in the third to fifth quintiles of wGRS had a significantly increased disease risk compared to baseline (individuals in the first quintile). Higher wGRS was associated with increased risk of childhood‐onset RA, especially among males.ConclusionThe magnitude and direction of the association between TNFAIP3, STAT4, and PTPN22 variants and childhood‐onset RA are similar to those observed in RA, suggesting that adult‐onset RA and childhood‐onset RA share common genetic risk factors. Using a wGRS, we have demonstrated the cumulative association of RA‐associated variants with susceptibility to childhood‐onset RA.
Oxidative stress activates a specific p53 transcriptional response that regulates cellular senescence and aging
Gambino, Valentina , Michele, Giulia de , Venezia, Oriella, Migliaccio, Pierluigi, Dall’Olio, Valentina, Bernard, Loris, Minardi, Simone P. , Fazia, Maria Agnese Della , BARTOLI, D., Servillo, Giuseppe , Alcalay, Myriam , Luzi, Lucilla , Giorgio, Marco , Scrable, Heidi, Pelicci, Pier Giuseppe , Migliaccio, Enrica , Bernard, Loris

Aging Cell | March 1, 2013 | Volume: 12 | Issue: 3 | Pages: 435-445

10.1111/acel.12060 | PMID 23448364 Get It

SummaryOxidative stress is a determining factor of cellular senescence and aging and a potent inducer of the tumour‐suppressor p53. Resistance to oxidative stress correlates with delayed aging in mammals, in the absence of accelerated tumorigenesis, suggesting inactivation of selected p53‐downstream pathways. We investigated p53 regulation in mice carrying deletion of p66, a mutation that retards aging and confers cellular resistance and systemic resistance to oxidative stress. We identified a transcriptional network of ~200 genes that are repressed by p53 and encode for determinants of progression through mitosis or suppression of senescence. They are selectively down‐regulated in cultured fibroblasts after oxidative stress, and, in vivo, in proliferating tissues and during physiological aging. Selectivity is imposed by p66 expression and activation of p44/p53 (also named Delta40p53), a p53 isoform that accelerates aging and prevents mitosis after protein damage. p66 deletion retards aging and increases longevity of p44/p53 transgenic mice. Thus, oxidative stress activates a specific p53 transcriptional response, mediated by p44/p53 and p66, which regulates cellular senescence and aging.
Faculty Opinions recommendation of Association of abnormal ovarian reserve parameters with a higher incidence of aneuploid blastocysts.
Coddington, Charles C.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature | March 1, 2013 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.3410/f.717980377.793471610 Get It

Comparative Effectiveness of Unruptured Cerebral Aneurysm Therapies
McDonald, Robert J. , Fan, Jiaquan , Kallmes, David F. , Cloft, Harry J. , McDonald, Jennifer S. , Lanzino, Giuseppe

Stroke | March 1, 2013 | Volume: 44 | Issue: 4 | Pages: 988-994

10.1161/strokeaha.111.000196 | PMID 23449260 Get It

Background and Purpose— Endovascular therapy has increasingly become the most common treatment for unruptured cerebral aneurysms in the United States. We evaluated a national, multi-hospital database to examine recent utilization trends and compare periprocedural outcomes between clipping and coiling treatments of unruptured aneurysms. Methods— The Premier Perspective database was used to identify patients hospitalized between 2006 to 2011 for unruptured cerebral aneurysm who underwent clipping or coiling therapy. A logistic propensity score was generated for each patient using relevant patient, procedure, and hospital variables, representing the probability of receiving clipping. Covariate balance was assessed using conditional logistic regression. Following propensity score adjustment using 1:1 matching methods, the risk of in-hospital mortality and morbidity was compared between clipping and coiling cohorts. Results— A total of 4899 unruptured aneurysm patients (1388 clipping, 3551 coiling) treated at 120 hospitals were identified. Following propensity score adjustment, clipping patients had a similar likelihood of in-hospital mortality (odds ratio [OR], 1.43; 95% confidence interval [CI], 0.49–4.44; P =0.47) but a significantly higher likelihood of unfavorable outcomes, including discharge to long-term care (OR, 4.78; 95% CI, 3.51–6.58; P <0.0001), ischemic complications (OR, 3.42; 95% CI, 2.39–4.99; P <0.0001), hemorrhagic complications (OR, 2.16; 95% CI, 1.33–3.57; P <0.0001), postoperative neurological complications (OR, 3.39; 95% CI, 2.25–5.22; P <0.0001), and ventriculostomy (OR, 2.10; 95% CI, 1.01–4.61; P =0.0320) compared with coiling patients. Conclusions— Among patients treated for unruptured intracranial aneurysms in a large sample of hospitals in the United States, clipping was associated with similar mortality risk but significantly higher periprocedural morbidity risk compared with coiling.
Other Content
Hara, Amy K.

American Journal of Roentgenology | March 1, 2013 | Volume: 193 | Issue: 4 | Pages: 1190-1190

10.2214/ajr.193.4.1190 Get It

Faculty Opinions recommendation of Cryopreservation of ovarian tissue in breast cancer patients: 10 years of experience.
Coddington, Charles C.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature | March 1, 2013 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.3410/f.717968692.793471607 Get It