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748 citation(s) found for "Ma, Dan".

Better leukemia-free and overall survival in AML in first remission following cyclophosphamide in combination with busulfan compared with TBI
Copelan, Edward A. , Hamilton, Betty K. , Avalos, Belinda R. , Ahn, Kwang Woo , Bolwell, Brian J., Zhu, Xiaochun , Aljurf, Mahmoud , Bredeson, Christopher , Cahn, Jean‐Yves , Costa, Luciano J. , Hale, Gregory A., Halter, Joerg , Inamoto, Yoshihiro , Kamble, Rammurti T., Litzow, Mark R. , Loren, Alison W. , Marks, David I. , Olavarría, Eduardo, Sabloff, Mitchell , Seftel, Matthew D. , Schouten, Harry C. , Üstün, Celalettin , Waller, Edmund K. , Weisdorf, Daniel J. , Wirk, Baldeep , Horowitz, Mary M. , Arora, Mukta , Cortes, Jörge E. , Kalaycio, Matt, Saber, Wael , Halter, Jörg , Besien, Koen van , Lima, Marcos de , Gale, Robert Peter , Hamadani, Mehdi , Roy, Vivek , Savani, Bipin N. , Szer, Jeff , Maziarz, Richard Thomas , Waller, Edmund K , Weisdorf, Dan , Cortes, Jorge , Costa, Luciano J , Sabloff, Mitchell

Blood | September 25, 2013 | Volume: 122 | Issue: 24 | Pages: 3863-3870

10.1182/blood-2013-07-514448 | PMID 24065243 Get It

Key Points In combination with cyclophosphamide, intravenous busulfan is associated with better leukemia-free and overall survival in AML than TBI.
Inverse Association between Programmed Death Ligand 1 and Genes in the VEGF Pathway in Primary Clear Cell Renal Cell Carcinoma
Joseph, Richard W. , Parasramka, Mansi, Eckel‐Passow, Jeanette E. , Serie, Dan, Wu, Kevin J. , Jiang, Liuyan , Kalari, Krishna R. , Thompson, R. Houston, Ho, Thai H. , Castle, Erik P., Cheville, John C. , Kwon, Eugene D., Thompson, E. Aubrey , Parker, Alexander S. , Ho, Thai , Kalari, Krishna R

Cancer Immunology Research | August 30, 2013 | Volume: 1 | Issue: 6 | Pages: 378-385

10.1158/2326-6066.cir-13-0042 | PMID 24778130 Get It

Abstract Increased angiogenesis and tumor-induced immune evasion are two mechanisms by which clear cell renal cell carcinoma (ccRCC) proliferate and metastasize; however, the relationship between these pathways in human ccRCC is poorly understood. We conducted a nested case–control study using 98 archived tumor samples from patients diagnosed with primary ccRCC between 1990 and 2006, half of which were identified by immunohistochemistry (IHC) as either programmed death ligand 1 (PDL-1)–positive or PDL-1–negative. RNAs were extracted from the formalin-fixed paraffin-embedded tumor slides and the expression of the VEGFA, VEGFR1, VEGFR2, and PDL-1 genes was quantified. We assessed the presence of tumor-infiltrating lymphocytes (TIL) by IHC for CD3, and then analyzed the relationship among VEGFA, VEGFR1, VEGFR2, CD3, and PDL-1. When analyzed as a continuous variable, PDL-1 protein expression by IHC inversely correlates with the expression of the three VEGF-related genes: VEGFA (r = −0.23; P = 0.01), VEGFR1 (r = −0.34; P < 0.001), and VEGFR2 (r = −0.23; P = 0.01). When dichotomized, the PDL-1–positive cohort trended toward a lower expression of VEGFA (fold change = 0.72; P = 0.056) and VEGFR1 (fold change = 0.69; P = 0.057). In addition, there was a significant and positive relationship between the presence of TIL as assessed by IHC for CD3 and PDL-1 by IHC (r = 0.25; P = 0.015), and there was a trend toward an inverse relationship between TIL and VEGFA gene expression (r = −0.18; P = 0.089). In conclusion, this is the first demonstration of an inverse association between the angiogenesis and PDL-1 pathways in tumor samples from primary ccRCC, and this relationship may be related to the immunosuppressive effects of VEGF signaling. Cancer Immunol Res; 1(6); 378–85. ©2013 AACR.
CFD Challenge Solution Using the Commercial Finite Volume Solver Fluent
Kallmes, David F. , Dragomir‐Daescu, Dan , Hodis, Simona

ASME 2012 Summer Bioengineering Conference, Parts A and B | July 19, 2013 | Volume: No volume available | Issue: No issue available | Pages: 141-142

10.1115/sbc2012-80564 Get It

The Modeling and Analysis group in the Division of Engineering at Mayo Clinic, Rochester works in the area of numerical modeling and experimental validation of cerebral aneurysms. In our modeling we use patient-specific geometries from imaging studies provided by Dr. Kallmes. The CFD analysis is performed with commercial packages Mimics (Materialise, Leuven, Belgium), for segmentation and ANSYS (ANSYS Inc. Canonsburg, PA) for meshing, simulation and post-processing. The experiments are conducted using a tomographic Particle Image Velocimetry system from LaVision Inc. The group is led by Dan Dragomir-Daescu, PhD and David F. Kallmes, MD and consists of two postdoctoral fellows and three engineers. For this project, CFD simulations were performed by postdoctoral fellow Simona Hodis, using the finite volume based solver Fluent.
A Meta-Analysis of the Association of Fracture Risk and Body Mass Index in Women
Johansson, Helena , Kanis, John А. , Odén, Anders, McCloskey, Eugène , Cummings, Steve, Eisman, John A. , Fujiwara, Saeko , Glüer, Claus‐C. , Krieg, Marc-Antoine, Kröger, Heikki , LaCroix, Andrea Z. , Lau, Edith, Leslie, William D. , Melton, L. Joseph, O’Neill, Terence W , Pasco, Julie A. , Reid, David M., Rivadeneira, Fernando , Staa, Tjeerd van , Yoshimura, Noriko , Chapurlat, Roland D , Christiansen, Claus , Díez‐Pérez, Adolfo , Goltzman, David , Hans, Didier B. , Khaw, Kay‐Tee , Mellström, Dan , Prior, Jerilynn C. , Zillikens, M. Carola , Leslie, William D

Journal of Bone and Mineral Research | June 17, 2013 | Volume: 29 | Issue: 1 | Pages: 223-233

10.1002/jbmr.2017 | PMID 23775829 Get It

ABSTRACT Several recent studies suggest that obesity may be a risk factor for fracture. The aim of this study was to investigate the association between body mass index (BMI) and future fracture risk at different skeletal sites. In prospective cohorts from more than 25 countries, baseline data on BMI were available in 398,610 women with an average age of 63 (range, 20–105) years and follow up of 2.2 million person-years during which 30,280 osteoporotic fractures (6457 hip fractures) occurred. Femoral neck BMD was measured in 108,267 of these women. Obesity (BMI ≥ 30 kg/m2) was present in 22%. A majority of osteoporotic fractures (81%) and hip fractures (87%) arose in non-obese women. Compared to a BMI of 25 kg/m2, the hazard ratio (HR) for osteoporotic fracture at a BMI of 35 kg/m2 was 0.87 (95% confidence interval [CI], 0.85–0.90). When adjusted for bone mineral density (BMD), however, the same comparison showed that the HR for osteoporotic fracture was increased (HR, 1.16; 95% CI, 1.09–1.23). Low BMI is a risk factor for hip and all osteoporotic fracture, but is a protective factor for lower leg fracture, whereas high BMI is a risk factor for upper arm (humerus and elbow) fracture. When adjusted for BMD, low BMI remained a risk factor for hip fracture but was protective for osteoporotic fracture, tibia and fibula fracture, distal forearm fracture, and upper arm fracture. When adjusted for BMD, high BMI remained a risk factor for upper arm fracture but was also a risk factor for all osteoporotic fractures. The association between BMI and fracture risk is complex, differs across skeletal sites, and is modified by the interaction between BMI and BMD. At a population level, high BMI remains a protective factor for most sites of fragility fracture. The contribution of increasing population rates of obesity to apparent decreases in fracture rates should be explored. © 2014 American Society for Bone and Mineral Research.
Genetic Variants That Confer Resistance to Malaria Are Associated with Red Blood Cell Traits in African-Americans: An Electronic Medical Record-based Genome-Wide Association Study
Ding, Keyue , Manolio, Teri A. , Crawford, Dana C. , Rasmussen‐Torvik, Laura J. , Ritchie, Marylyn D. , Denny, Joshua C. , Masys, Daniel R., Jouni, Hayan, Pachecho, Jennifer A, Roden, Dan M. , Chisholm, Rex L. , Andrade, Mariza de , Kho, Abel , Roden, Dan M. , Kullo, Iftikhar J. , Denny, Joshua C , Rasmussen-Torvik, Laura J

G3 Genes|Genomes|Genetics | May 29, 2013 | Volume: 3 | Issue: 7 | Pages: 1061-1068

10.1534/g3.113.006452 | PMID 23696099 Get It

Abstract To identify novel genetic loci influencing interindividual variation in red blood cell (RBC) traits in African-Americans, we conducted a genome-wide association study (GWAS) in 2315 individuals, divided into discovery (n = 1904) and replication (n = 411) cohorts. The traits included hemoglobin concentration (HGB), hematocrit (HCT), RBC count, mean corpuscular volume (MCV), mean corpuscular hemoglobin (MCH), and mean corpuscular hemoglobin concentration (MCHC). Patients were participants in the electronic MEdical Records and GEnomics (eMERGE) network and underwent genotyping of ~1.2 million single-nucleotide polymorphisms on the Illumina Human1M-Duo array. Association analyses were performed adjusting for age, sex, site, and population stratification. Three loci previously associated with resistance to malaria—HBB (11p15.4), HBA1/HBA2 (16p13.3), and G6PD (Xq28)—were associated (P ≤ 1 × 10−6) with RBC traits in the discovery cohort. The loci replicated in the replication cohort (P ≤ 0.02), and were significant at a genome-wide significance level (P < 5 × 10−8) in the combined cohort. The proportions of variance in RBC traits explained by significant variants at these loci were as follows: rs7120391 (near HBB) 1.3% of MCHC, rs9924561 (near HBA1/A2) 5.5% of MCV, 6.9% of MCH and 2.9% of MCHC, and rs1050828 (in G6PD) 2.4% of RBC count, 2.9% of MCV, and 1.4% of MCH, respectively. We were not able to replicate loci identified by a previous GWAS of RBC traits in a European ancestry cohort of similar sample size, suggesting that the genetic architecture of RBC traits differs by race. In conclusion, genetic variants that confer resistance to malaria are associated with RBC traits in African-Americans.
Pin1‐mediated Runx2 modification is critical for skeletal development
Yoon, Won‐Joon, Islam, Rabia , Woo, Kyung Mi , Uchida, Takafumi , Wijnen, André J. van , Stein, Janet L. , Lian, Jane B. , Choi, Je‐Yong, Bae, Suk‐Chul , Ryoo, Hyun‐Mo , Cho, Young‐Dan , Baek, Jeong‐Hwa , Komori, Toshihisa , Stein, Gary S. , van Wijnen, Andre J

Journal of Cellular Physiology | May 23, 2013 | Volume: 228 | Issue: 12 | Pages: 2377-2385

10.1002/jcp.24403 | PMID 23702614 Get It

AbstractRunx2 is the master transcription factor for bone formation. Haploinsufficiency of RUNX2 is the genetic cause of cleidocranial dysplasia (CCD) that is characterized by hypoplastic clavicles and open fontanels. In this study, we found that Pin1, peptidyl prolyl cis–trans isomerase, is a critical regulator of Runx2 in vivo and in vitro. Pin1 mutant mice developed CCD‐like phenotypes with hypoplastic clavicles and open fontanels as found in the Runx2+/− mice. In addition Runx2 protein level was significantly reduced in Pin1 mutant mice. Moreover Pin1 directly interacts with the Runx2 protein in a phosphorylation‐dependent manner and subsequently stabilizes Runx2 protein. In the absence of Pin1, Runx2 is rapidly degraded by the ubiquitin‐dependent protein degradation pathway. However, Pin1 overexpression strongly attenuated uniquitin‐dependent Runx2 degradation. Collectively conformational change of Runx2 by Pin1 is essential for its protein stability and possibly enhances the level of active Runx2 in vivo. J. Cell. Physiol. 228: 2377–2385, 2013. © 2013 Wiley Periodicals, Inc.
Renin–Angiotensin Blockade Combined With Natriuretic Peptide System Augmentation
Lueder, Thomas G. von , Sangaralingham, S. Jeson , Wang, Bing H. , Kompa, Andrew R. , Burnett, John C. , Krum, Henry, Sangaralingham, S. Jeson , Atar, Dan

Circulation: Heart Failure | May 21, 2013 | Volume: 6 | Issue: 3 | Pages: 594-605

10.1161/circheartfailure.112.000289 | PMID 23694773 Get It