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4565 citation(s) found for "Yu, Virginia".

Adult hematopoietic stem cells require NKAP for maintenance and survival
Pajerowski, Anthony G., Shapiro, Michael J. , Gwin, Kimberly, Sundsbak, Rhianna S., Nelson-Holte, Molly, Medina, Kay L. , Shapiro, Virginia Smith

Blood | July 7, 2010 | Volume: 116 | Issue: 15 | Pages: 2684-2693

10.1182/blood-2010-02-268391 | PMID 20610818 Get It

Abstract Steady-state hematopoiesis is sustained through differentiation balanced with proliferation and self-renewal of hematopoietic stem cells (HSCs). Disruption of this balance can lead to hematopoietic failure, as hematopoietic differentiation without self-renewal leads to loss of the HSC pool. We find that conditional knockout mice that delete the transcriptional repressor NKAP in HSCs and all hematopoietic lineages during embryonic development exhibit perinatal lethality and abrogation of hematopoiesis as demonstrated by multilineage defects in lymphocyte, granulocyte, erythrocyte and megakaryocyte development. Inducible deletion of NKAP in adult mice leads to lethality within 2 weeks, at which point hematopoiesis in the bone marrow has halted and HSCs have disappeared. This hematopoietic failure and lethality is cell intrinsic, as radiation chimeras reconstituted with inducible Mx1-cre NKAP conditional knockout bone marrow also succumb with a similar time course. Even in the context of a completely normal bone marrow environment using mixed radiation chimeras, NKAP deletion results in HSC failure. NKAP deletion leads to decreased proliferation and increased apoptosis of HSCs, which is likely due to increased expression of the cyclin-dependent kinase inhibitors p21Cip1/Waf1 and p19Ink4d. These data establish NKAP as one of a very small number of transcriptional regulators that is absolutely required for adult HSC maintenance and survival.
Preliminary evaluation of factors associated with premature trial closure and feasibility of accrual benchmarks in phase III oncology trials
Schroen, Anneke T. , Petroni, Gina R. , Wang, Hongkun , Wang, Xiaofei F., Cronin, Walter M., Sargent, Daniel J. , Benedetti, Jacqueline, Wickerham, D. Lawrence, Djulbegović, Benjamin , Slingluff, Craig L. , Gray, Robert J. , Sargent, Daniel J

Clinical Trials | July 1, 2010 | Volume: 7 | Issue: 4 | Pages: 312-321

10.1177/1740774510374973 | PMID 20595245 Get It

Background A major challenge for randomized phase III oncology trials is the frequent low rates of patient enrollment, resulting in high rates of premature closure due to insufficient accrual. Purpose We conducted a pilot study to determine the extent of trial closure due to poor accrual, feasibility of identifying trial factors associated with sufficient accrual, impact of redesign strategies on trial accrual, and accrual benchmarks designating high failure risk in the clinical trials cooperative group (CTCG) setting. Methods A subset of phase III trials opened by five CTCGs between August 1991 and March 2004 was evaluated. Design elements, experimental agents, redesign strategies, and pretrial accrual assessment supporting accrual predictions were abstracted from CTCG documents. Percent actual/predicted accrual rate averaged per month was calculated. Trials were categorized as having sufficient or insufficient accrual based on reason for trial termination. Analyses included univariate and bivariate summaries to identify potential trial factors associated with accrual sufficiency. Results Among 40 trials from one CTCG, 21 (52.5%) trials closed due to insufficient accrual. In 82 trials from five CTCGs, therapeutic trials accrued sufficiently more often than nontherapeutic trials (59% vs 27%, p = 0.05). Trials including pretrial accrual assessment more often achieved sufficient accrual than those without (67% vs 47%, p = 0.08). Fewer exclusion criteria, shorter consent forms, other CTCG participation, and trial design simplicity were not associated with achieving sufficient accrual. Trials accruing at a rate much lower than predicted (<35% actual/predicted accrual rate) were consistently closed due to insufficient accrual. Limitations This trial subset under-represents certain experimental modalities. Data sources do not allow accounting for all factors potentially related to accrual success. Conclusion Trial closure due to insufficient accrual is common. Certain trial design factors appear associated with attaining sufficient accrual. Defining accrual benchmarks for early trial termination or redesign is feasible, but better accrual prediction methods are critically needed. Future studies should focus on identifying trial factors that allow more accurate accrual predictions and strategies that can salvage open trials experiencing slow accrual. Clinical Trials 2010; 7: 312—321. http://ctj.sagepub.com
Predicting Survival in Pulmonary Arterial Hypertension
Benza, Raymond L. , Miller, Dave P., Frantz, Robert P. , Foreman, Aimee J., Coffey, Christopher S. , Frost, Adaani , Barst, Robyn J., Badesch, David B., Elliott, C. Gregory , Liou, Theodore G. , McGoon, Michael D., Benza, Raymond L. , Gomberg‐Maitland, Mardi , Frantz, Robert P

Circulation | June 29, 2010 | Volume: 122 | Issue: 2 | Pages: 164-172

10.1161/circulationaha.109.898122 | PMID 20585012 Get It

Background— Factors that determine survival in pulmonary arterial hypertension (PAH) drive clinical management. A quantitative survival prediction tool has not been established for research or clinical use. Methods and Results— Data from 2716 patients with PAH enrolled consecutively in the US Registry to Evaluate Early and Long-Term PAH Disease Management (REVEAL) were analyzed to assess predictors of 1-year survival. We identified independent prognosticators of survival and derived a multivariable, weighted risk formula for clinical use. One-year survival from the date of enrollment was 91.0% (95% confidence interval [CI], 89.9 to 92.1). In a multivariable analysis with Cox proportional hazards, variables independently associated with increased mortality included pulmonary vascular resistance >32 Wood units (hazard ratio [HR], 4.1; 95% CI, 2.0 to 8.3), PAH associated with portal hypertension (HR, 3.6; 95% CI, 2.4 to 5.4), modified New York Heart Association/World Health Organization functional class IV (HR, 3.1; 95% CI, 2.2 to 4.4), men >60 years of age (HR, 2.2; 95% CI, 1.6 to 3.0), and family history of PAH (HR, 2.2; 95% CI, 1.2 to 4.0). Renal insufficiency, PAH associated with connective tissue disease, functional class III, mean right atrial pressure, resting systolic blood pressure and heart rate, 6-minute walk distance, brain natriuretic peptide, percent predicted carbon monoxide diffusing capacity, and pericardial effusion on echocardiogram all predicted mortality. Based on these multivariable analyses, a prognostic equation was derived and validated by bootstrapping technique. Conclusions— We identified key predictors of survival based on the patient’s most recent evaluation and formulated a contemporary prognostic equation. Use of this tool may allow the individualization and optimization of therapeutic strategies. Serial follow-up and reassessment are warranted. Clinical Trial Registration— URL: http://www.clinicaltrials.gov. Unique identifier: NCT00370214.
Can Radiologist Training and Testing Ensure High Performance in CT Colonography? Lessons From the National CT Colonography Trial
Chen, Mei‐Hsiu , Herman, B. , Johnson, C. Daniel, Toledano, Alicia Y. , Dachman, Abraham H. , Hara, Amy K., Fidler, Jeff L. , Menias, Christine O. , Kuo, Mark , Horton, Karen M., Cheema, Jugesh I., Iyer, R. Rajagopalan , Siewert, Bettina , Obregon, Richard G., Zimmerman, Peter, Halvorsen, Robert A., Casola, Giovanna, Morrin, Martina, Fletcher, Joel G. , Fidler, Jeff L. , Coakley, Kevin J. , Yee, Judy

American Journal of Roentgenology | June 21, 2010 | Volume: 195 | Issue: 1 | Pages: 117-125

10.2214/ajr.09.3659 | PMID 20566804 Get It

Glucose Meter Performance Criteria for Tight Glycemic Control Estimated by Simulation Modeling
Karon, Brad S. , Boyd, James C. , Klee, George G.

Clinical Chemistry | June 16, 2010 | Volume: 56 | Issue: 7 | Pages: 1091-1097

10.1373/clinchem.2010.145367 | PMID 20511447 Get It

AbstractBackground: Glucose meter analytical performance criteria required for safe and effective management of patients on tight glycemic control (TGC) are not currently defined. We used simulation modeling to relate glucose meter performance characteristics to insulin dosing errors during TGC.Methods: We used 29 920 glucose values from patients on TGC at 1 institution to represent the expected distribution of glucose values during TGC, and we used 2 different simulation models to relate glucose meter analytical performance to insulin dosing error using these 29 920 initial glucose values and assuming 10%, 15%, or 20% total allowable error (TEa) criteria.Results: One-category insulin dosing errors were common under all error conditions. Two-category insulin dosing errors occurred more frequently when either 20% or 15% TEa was assumed compared with 10% total error. Dosing errors of 3 or more categories, those most likely to result in hypoglycemia and thus patient harm, occurred infrequently under all error conditions with the exception of 20% TEa.Conclusions: Glucose meter technologies that operate within a 15% total allowable error tolerance are unlikely to produce large (≥3-category) insulin dosing errors during TGC. Increasing performance to 10% TEa should reduce the frequency of 2-category insulin dosing errors, although additional studies are necessary to determine the clinical impact of such errors during TGC. Current criteria that allow 20% total allowable error in glucose meters may not be optimal for patient management during TGC.
Confirmation of Linkage to and Localization of Familial Colon Cancer Risk Haplotype on Chromosome 9q22
Gray‐McGuire, Courtney, Guda, Kishore , Adrianto, Indra , Lin, Chee Paul , Natale, Leanna, Potter, John D. , Lindor, Noralane M. , Goode, Ellen L. , Jenkins, Robert B. , Jenkins, Mark A. , Young, Joanne , Buchanan, Daniel D. , Gallinger, Steve, Lewis, Susan, Elston, Robert C. , Markowitz, Sanford D. , Wiesner, Georgia L. , Newcomb, Polly A. , Poole, Elizabeth M. , Ulrich, Cornelia M. , Fridley, Brooke L. , Marchand, Loı̈c Le , Casey, Graham , Haile, Robert W. , Hopper, John L. , Adams, Mark , Lewis, Susan, Willis, Joseph , Buchanan, Daniel D , Jenkins, Mark A , Potter, John D

Cancer Research | June 15, 2010 | Volume: 70 | Issue: 13 | Pages: 5409-5418

10.1158/0008-5472.can-10-0188 | PMID 20551049 Get It

Abstract Genetic risk factors are important contributors to the development of colorectal cancer. Following the definition of a linkage signal at 9q22-31, we fine mapped this region in an independent collection of colon cancer families. We used a custom array of single-nucleotide polymorphisms (SNP) densely spaced across the candidate region, performing both single-SNP and moving-window association analyses to identify a colon neoplasia risk haplotype. Through this approach, we isolated the association effect to a five-SNP haplotype centered at 98.15 Mb on chromosome 9q. This haplotype is in strong linkage disequilibrium with the haplotype block containing HABP4 and may be a surrogate for the effect of this CD30 Ki-1 antigen. It is also in close proximity to GALNT12, also recently shown to be altered in colon tumors. We used a predictive modeling algorithm to show the contribution of this risk haplotype and surrounding candidate genes in distinguishing between colon cancer cases and healthy controls. The ability to replicate this finding, the strength of the haplotype association (odds ratio, 3.68), and the accuracy of our prediction model (∼60%) all strongly support the presence of a locus for familial colon cancer on chromosome 9q. Cancer Res; 70(13); 5409–18. ©2010 AACR.
Pharmacogenetic Predictors of Adverse Events and Response to Chemotherapy in Metastatic Colorectal Cancer: Results From North American Gastrointestinal Intergroup Trial N9741
McLeod, Howard L. , Sargent, Daniel J. , Marsh, Sharon, King, Cristi R., Fuchs, Charles S. , Ramanathan, Ramesh K., Williamson, Stephen K. , Findlay, B., Thibodeau, Stephen N. , Grothey, Axel, Morton, Roscoe F., Goldberg, Richard M. , Green, Erin M. , Sargent, Daniel J , Williamson, Stephen

Journal of Clinical Oncology | June 8, 2010 | Volume: 28 | Issue: 20 | Pages: 3227-3233

10.1200/jco.2009.21.7943 | PMID 20530282 Get It

Purpose With three available chemotherapy drugs for advanced colorectal cancer (CRC), response rate (RR) and survival outcomes have improved with associated morbidity, accentuating the need for tools to select optimal individualized treatment. Pharmacogenetics identifies the likelihood of adverse events or response based on variants in genes involved in drug transport, metabolism, and cellular targets. Patients and Methods Germline DNA was extracted from 520 patients on the North American Gastrointestinal Intergroup N9741 study. Three study arms were evaluated: IFL (fluorouracil [FU] + irinotecan [IRN]), FOLFOX (FU + oxaliplatin), and IROX (IRN + oxaliplatin). Information on adverse events, response, and disease-free survival was available. Thirty-four variants in 15 candidate genes for analysis based on previous associations with adverse events or outcome were assessed. Genotyping was performed using pyrosequencing. Results All variants were polymorphic. The homozygous UGT1A1*28 allele observed in 9% of patients was associated with risk of grade 4 neutropenia in patients on IROX (55% v 15%; P = .002). Deletion in GSTM1 was associated with grade 4 neutropenia after FOLFOX (28% v 16%; P = .02). Patients with a homozygous variant genotype for GSTP1 were more likely to discontinue FOLFOX because of neurotoxicity (24% v 10%; P = .01). The presence of a CYP3A5 variant was significantly associated with RR on IFL (29% v 60%; P = .0074). Most previously published genotype-toxicity or -efficacy relationships were not validated in this study. Conclusion This study provides a platform to evaluate pharmacogenetic predictors of response or severe adverse events in advanced CRC. Pharmacogenetic studies can be conducted in multicenter trials, and our findings demonstrate that with continued research, clinical application is practical.
Intraventricular Tension Pneumocephalus as a Complication of Paranasal Sinus Surgery
Davis, D.H., Laws, Edward R. , McDonald, Thomas J. , Salassa, John R., Phillips, Lawrence H.

Neurosurgery | May 30, 2010 | Volume: 8 | Issue: 5 | Pages: 574-576

10.1227/00006123-198105000-00011 | PMID 7266798 Get It

Abstract A case of intraventricular tension pneumocephalus occurring as a complication of paranasal sinus surgery is presented. The pathophysiology of tension pneumocephalus is discussed and emphasis is placed on the potentially life-threatening increase in intracranial pressure that occurs. Tension pneumocephalus requires prompt diagnosis and treatment.
Retraction: Reprogrammed FoxP3+ T Regulatory Cells Become IL-17+ Antigen-Specific Autoimmune Effectors In Vitro and In Vivo
Cabrera, Rosalyn, Schenk, Erin L. , Nava-Parada, Pilar , Bell, Michael P., Keulen, Virginia P. Van , Marler, Ronald J., Felts, Sara J. , Pease, Larry R.

The Journal of Immunology | May 18, 2010 | Volume: 184 | Issue: 11 | Pages: 6556-6556

10.4049/jimmunol.1090035 | PMID 20483796 Get It

Retraction: Induction of a Th1 Response from Th2-Polarized T Cells by Activated Dendritic Cells: Dependence on TCR:Peptide-MHC Interaction, ICAM-1, IL-12, and IFN-γ
Wiehagen, Karla R., Pulko, Vesna, Keulen, Virginia Van, Faubion, William A. , Knutson, Keith L. , Pease, Larry R. , Keulen, Virginia P. Van , Knutson, Keith L.

The Journal of Immunology | May 18, 2010 | Volume: 184 | Issue: 11 | Pages: 6555-6555

10.4049/jimmunol.1090034 | PMID 20483795 Get It