Citations

Mayo Clinic

Clear

4794 citation(s) found for "Yu, Jennifer".

Abstract 5099: HPV serology for rapid detection of HPV positive oropharyngeal cancer
Kaushik, Akshansh, Patel, T. B., Eger, Joshua , Yuvaraj, Padhmavathy, Bartemes, Kathleen, Griesel, Marisa D., Hunter, Danielle E., Abel, Katie Van, Mathew, Anu , Wang, M., Dzantiev, Leonid, Stengelin, Martin , Wohlstadter, Jacob N. , Spolarich, Ann Eshenaur , Christen, Jennifer Blain , Sturgis, Erich, Anderson, K. S., Blain Christen, Jennifer , Kaushik, Akshansh, Routman, David M. , Patel, Tej, Bartemes, Kathleen R. , Dahlstrom, Kristina R. , Sturgis, Erich M.

Cancer Research | April 3, 2026 | Volume: 86 | Issue: 7_Supplement | Pages: 5099-5099

10.1158/1538-7445.am2026-5099 Get It

Abstract Background: HPV16 (human papillomavirus) is a leading cause of oropharyngeal cancer (OPC) in the US. Antibodies to HPV16 early antigens are detectable in serum samples up to two decades before diagnosis and are potential biomarkers for early detection. In this study, we have developed and compared three custom HPV16 serology platforms for detection of OPC: MSD (Meso Scale Discovery) electrochemiluminescent detection, RAPID ELISA, and a novel semi-quantitative lateral flow assay (LFA) using a custom android application. Methods: For the MSD platform, recombinant HPV 16 antigens (E1, E2, E6, E7) were synthesized in mammalian cells and printed on multiplexed arrays. In RAPID ELISA, GST-tagged antigens (E1, E2, E6, E7) were expressed using mammalian in vitro transcription and translation and bound IgG detected. For the LFA, His-tagged recombinant proteins (HPV16 CE2 184-365aa and HPV16 E7) were synthesized, printed, and antibodies detected with protein G conjugated nanoparticles. Archived serum samples drawn from newly-diagnosed OPC patients (n = 60), with matching saliva samples (n=54, MSD assay only) were obtained from Mayo Clinic. Unmatched controls (n = 46) were obtained from AT Still. For the lateral flow assay, colorimetric image analysis was done using a titration curve of known concentration of monoclonal antibody. We optimized the biomarker panel (E2, E6, and E7 for MSD and ELISA, and for LFA E2, and E7) by using multiparametric analysis and plotting the receiver operating curves to the test performance, and assays were compared using the Cohen’s kappa statistic. Results: At 98% specificity, the MSD HPV16 serologic assay achieved 88% sensitivity, similar to RAPID ELISA, and the LFA assay at 85% sensitivity. The signal intensities for saliva samples were weaker at 24% sensitivity. The Cohen’s kappa value ranged from 0.74 to 0.78 for the comparison between all three assays. There was only one sample among all the cases that was negative by all three serology tests. Conclusion: All three assays have strong concordance for the detection of HPV16 early antigen serology. All the tests can facilitate large scale HPV serology research. Citation Format: Akshansh Kaushik, David Routman, Tej Patel, Joshua Eger, Padhmavathy Yuvaraj, Kathleen R. Bartemes, Marisa D. Griesel, Danielle E. Hunter, Katie Van Abel, Anu Mathew, Mingyue Wang, Leonid Dzantiev, Martin Stengelin, Jacob N. Wohlstadter, Ann Spolarich, Kristina R. Dahlstrom, Jennifer Blain Christen, Erich Sturgis, Karen Anderson. HPV serology for rapid detection of HPV positive oropharyngeal cancer [abstract]. In: Proceedings of the American Association for Cancer Research Annual Meeting 2026; Part 1 (Regular Abstracts); 2026 Apr 17-22; San Diego, CA. Philadelphia (PA): AACR; Cancer Res 2026;86(7 Suppl):Abstract nr 5099.
Artificial intelligence-enhanced electrocardiogram for the detection of rheumatic heart disease
Ntsekhe, Mpiko , Harmon, David , Harmon, David M , Ngo, Christie, Ntsekhe, Mpiko , Bhorat, Raeesa, Liu, Kan, Dugan, Jennifer , Ngo, Christie, Friedman, Paul A. , Bagula, Herman, Attia, Zachi I.

European Heart Journal - Digital Health | April 3, 2026 | Volume: 7 | Issue: 4 | Pages: No page available

10.1093/ehjdh/ztag056 | PMID 42077386 Get It

Abstract Aims Rheumatic heart disease (RHD) remains the most prevalent acquired cardiovascular disease among young adults in developing countries, and there is a critical need for an efficient, affordable, and available screening strategy to detect RHD in these resource-limited areas. The 12-lead electrocardiogram (ECG) is a ubiquitous, inexpensive diagnostic tool, and application of artificial intelligence to the ECG (AI-ECG) has allowed for screening of various cardiovascular pathologies. Methods and results Patients aged >18 years with severe RHD with at least one transthoracic echocardiogram and one standard 12-lead ECG performed at Groote Schuur Hospital, Cape Town, within 180 days of each other were eligible. A total of 920 RHD patients were identified, with 2199 corresponding controls from the same medical centre. Patients were allocated to derivation (80%), validation (10%), and testing (10%) groups, respectively. The AI-ECG to detect RHD from a standard 12-lead ECG was built using the Keras framework under Tensorflow backend. In the test group, the AI-ECG for RHD exhibited strong algorithm performance with an AUC of 0.890 (95% Confidence Interval 0.848–0.940) and an accuracy of 83.8%. The algorithm remained robust between RHD presentation: mitral valve alone (AUC 0.913) and mixed mitral and aortic valve disease (AUC 0.858). There were minor performance differences in the subgroup analysis of patient sex, age, and ECG characteristics. Conclusion In this study, an AI-ECG algorithm was successfully developed to screen for advanced RHD from a standard 12-lead ECG, and the AI-ECG performance remained acceptable across most subgroups, including RHD manifestation, patient sex, age <70 years, and ECG characteristics.
Abstract 6261: Inflammation-related exposures and histotype- specific ovarian cancer risk in the Ovarian Cancer Association Consortium (OCAC).
Tworoger, Shelley S., Jensen, Allan, Anton-Culver, Hoda, Bowtell, D., Brooks-Wilson, Angela, Berchuck, A., Cramer, Daniel William, Cunningham, Julie M. , Doherty, Jennifer A., Goode, Ellen L. , Harris, Holly Ruth, Kjaer, Susanne K., Le, Nhu, Lee, A. W., Modugno, Francesmary, Moysich, Kirsten B., Pearce, Celeste, Pike, Malcolm C. , Rossing, Mary A., Schildkrau, Joellen M., Sutphen, Rebecca , Ziogas, A., Wentzensen, Nicolas , Goodman, Marc T , Akonde, Maxwell , Trabert, Britton , Tworoger, Shelley S. , Jensen, Allan , Terry, Kathryn L. , Sampson, Joshua N. , Anton‐Culver, Hoda , Bowtell, David D.L. , Bandera, Elisa V. , Cramer, Daniel W. , Cook, Linda S. , Doherty, Jennifer A. , Goodman, Marc T. , Harris, Holly R. , Kjær, Susanne K. , Modugno, Francesmary , Moysich, Kirsten B., Pearce, Celeste Leigh , Risch, Harvey A. , Rossing, Mary Anne, Stram, Daniel O. , Berg, David Van Den, Webb, Penelope M. , Wu, Anna M.

Cancer Research | April 3, 2026 | Volume: 86 | Issue: 7_Supplement | Pages: 6261-6261

10.1158/1538-7445.am2026-6261 Get It

Abstract Background: Chronic inflammation is implicated in ovarian carcinogenesis, but how different inflammation-related exposures individually or jointly affect histotype-specific associations remains unclear. Materials and Methods: We pooled data from 16 case-control studies in the Ovarian Cancer Association Consortium to evaluate associations of eight inflammation-related factors (anti-inflammatory: aspirin use, tubal ligation (TL); pro-inflammatory: endometriosis, obesity, lifetime ovulatory cycles (LOC), smoking, pelvic inflammatory disease (PID), polycystic ovary syndrome (PCOS)) with epithelial ovarian cancer (OvC) by histologic subtype. We examined individual associations and clustering of risk factors across histotypes and computed population attributable risk (PAR) for each factor. We assessed additive and multiplicative interactions for exposure combinations. Results: Associations with OvC risk differed by histotype (e.g., high-grade serous: aspirin: OR=0.90; 95%CI 0.82, 0.99; TL: OR=0.80; 95%CI 0.73, 0.88; overall serous: endometriosis: OR=1.17; 95%CI 1.03, 1.31; high LOC: OR=1.42; 95%CI 1.28, 1.58; obesity (low-grade serous): OR=1.50; 95%CI 1.14, 1.98). Clustering analyses showed highly correlated risk profiles in endometrioid and clear cell (r=0.91). High-grade serous and mucinous profiles were moderately correlated with endometrioid and clear cell (r=0.60) tumors. The profile for low-grade serous (r=0.36) tumors was distinct from other histotypes. PAR estimates suggested modifying aspirin use, TL, and LOCs could substantially reduce burdens of endometrioid, clear cell and mucinous tumors. Out of 28 exposure combinations tested in overall OvC and 189 by histotype, we observed 12 interactions. Not using aspirin regularly showed positive additive interactions with obesity and high LOCs, particularly in endometrioid tumors (obesity relative excess risk due to interaction (RERI)=0.74, 95%CI 0.31, 1.18; Pint=0.001 for; LOCs RERI=0.80, 95%CI 0.03, 1.56; Pint=0.04). Not using aspirin regularly also showed a positive additive interaction with endometriosis in clear cell tumors (RERI=1.77, 95%CI 0.03, 3.52; Pint=0.05). Lack of TL showed positive interactions with obesity in endometrioid (RERI=0.86, 95%CI 0.17, 1.53; Pint=0.01) and mucinous (RERI=1.10, 95%CI 0.23, 1.97; Pint=0.01) tumors, while negative additive interactions were observed for smoking and endometriosis in endometrioid tumors (RERI=-1.12, 95%CI -2.19, -0.05; Pint=0.04). A multiplicative interaction was observed between obesity and endometriosis in mucinous tumors (Pint=0.01). Conclusion: The findings suggest ovarian tumorigenesis is strongly shaped by pro- and anti-inflammatory pathways that act largely independently. Further examining these pathways may clarify the origins of histotype heterogeneity and guide prevention strategies. Citation Format: Maxwell Akonde, Britton Trabert, SHELLEY TWOROGER, Allan Jensen, Kathryn L. Terry, Joshua Sampson, Hoda Anton-Culver, David Bowtell, Elisa V. Bandera, Angela Brooks-Wilson, Andrew Berchuck, Daniel William Cramer, Linda S. Cook, Julie M. Cunningham, Jennifer A. Doherty, Ellen L. Goode, Marc T. Goodman, Holly Ruth Harris, Susanne K. Kjaer, Nhu Le, Alice Wen-Ron Lee, Francesmary Modugno, Kirsten B. Moysich, Celeste Pearce, Malcolm C. Pike, Harvey A. Risch, Mary A. Rossing, Joellen M. Schildkrau, Daniel O. Stram, Rebecca Sutphen, David Van Den Berg, Penelope M. Webb, Anna Wu, Argyrios Ziogas, Nicolas A. Wentzensen. Inflammation-related exposures and histotype- specific ovarian cancer risk in the Ovarian Cancer Association Consortium (OCAC) [abstract]. In: Proceedings of the American Association for Cancer Research Annual Meeting 2026; Part 1 (Regular Abstracts); 2026 Apr 17-22; San Diego, CA. Philadelphia (PA): AACR; Cancer Res 2026;86(7 Suppl):Abstract nr 6261.
Abstract 7124: Resistance to the SFK inhibitor NXP900 in cholangiocarcinoma is characterized by IL13RA2-AKT signaling and can be overcome by combination therapy
Yee, Shelby K., Carlson, Danielle M. , Ozmert, Enis H., Nishi, Hidemi , Jessen, Erik , Mun, Dong-Gi, Abeynayake, Aushinie, Abdelrahman, Amro , Werneburg, Nathan W., Li, B. , Truty, Mark J. , Ilyas, Sumera, Gores, Gregory J., Smoot, Rory L., Kuipers, Hendrien , Carlson, Danielle Marie , Sample, Jack W. , Mun, Dong‐Gi , Tomlinson, Jennifer L. , Borad, Mitesh J. , Ilyas, Sumera I. , Gores, Gregory J. , Smoot, Rory L.

Cancer Research | April 3, 2026 | Volume: 86 | Issue: 7_Supplement | Pages: 7124-7124

10.1158/1538-7445.am2026-7124 Get It

Abstract Introduction: Src Family Kinases (SFKs) have a crucial role in tumor proliferation, survival, and metastasis. NXP900 is a highly selective SFK inhibitor with a novel mechanism of action that locks SFKs in a closed, inhibited conformation, providing sustained suppression of catalytic and non-catalytic functions, which is distinct from other SFK inhibitors like dasatinib. A phase I clinical trial of NXP900 in patients with advanced solid tumors is ongoing. Our preclinical studies showed therapeutic efficacy of NXP900 in cholangiocarcinoma (CCA) through decreased YAP, RAF-MAP and PI3K-AKT signaling. Multiomic profiling (RNA-seq, proteomics, phosphoproteomics) of CCA patient-derived xenografts implicated AKT pathway activation in primary NXP900 resistance. NXP900-resistant CCA cell lines generated via prolonged sublethal dose escalation showed a strong IL13RA2-AKT signature on multiomic analysis. Thus, we hypothesized that IL13RA2-AKT signaling was a mechanism of NXP900 resistance. We aimed to define this mechanism and demonstrate that the combinatorial targeting of IL13RA2 or AKT resensitizes to NXP900 treatment. Methods: HuCCT1 or HuCCT1-Resisant (HuCCT1-R) cells were injected bilaterally into the flanks of NOD/SCID mice and were allowed to grow for 3 months prior to tumor collection and analysis. Tumor engraftment and growth between HuCCT1 and HuCCT1-R groups were compared. To delineate the mechanisms for acquired NXP900 resistance, in-vitro treatment studies were performed using siRNAs targeting IL13RA2 as well as combination treatment with capivasertib, a pan-AKT inhibitor. Results: The HuCCT1-R cell line exhibited a higher rate of tumor engraftment and formed significantly larger tumors compared to the parental HuCCT1 cell line, indicating enhanced tumorigenic potential associated with acquired resistance. Silencing of IL13RA2 in HuCCT1-R cells resulted in pronounced reduction of cell proliferation and partially restored sensitivity to NXP900 treatment. Immunoblot analysis demonstrated a corresponding reduction in phosphorylated AKT (Thr308), consistent with suppression of downstream PI3K-AKT signaling. Furthermore, combination treatment of HuCCT1-R cells with the AKT inhibitor capivasertib, and NXP900 led to a significant increase in cell death and a greater inhibition in cell proliferation compared to either agent alone, indicating enhanced responsiveness and improved therapeutic efficacy. Conclusion: These findings confirm the central role of IL13RA2 signaling and the PI3K-AKT pathway in mediating acquired resistance to NXP900, consistent with our previous multiomics analysis. Importantly, this study identifies combination strategies that may be able to overcome NXP900 resistance, supporting the development of combinatorial approaches to restore therapeutic efficacy in resistant tumors. Citation Format: Shelby K. Yee, Hendrien Kuipers, Danielle M. Carlson, Jack W. Sample, Enis Ozmert, Hidemi Nishi, Erik Jessen, Dong-Gi Mun, Aushinie M. Abeynayake, Jennifer L. Tomlinson, Amro M. Abdelrahman, Nathan W. Werneburg, Binbin Li, Mitesh J. Borad, Mark J. Truty, Sumera I. Ilyas, Gregory J. Gores, Rory L. Smoot. Resistance to the SFK inhibitor NXP900 in cholangiocarcinoma is characterized by IL13RA2-AKT signaling and can be overcome by combination therapy [abstract]. In: Proceedings of the American Association for Cancer Research Annual Meeting 2026; Part 1 (Regular Abstracts); 2026 Apr 17-22; San Diego, CA. Philadelphia (PA): AACR; Cancer Res 2026;86(7 Suppl):Abstract nr 7124.
Abstract 1184: IHC-based prognostic sub-stratification of ovarian endometrioid carcinoma.
Taengwa, Gamaliel , Atkinson, Hunter J., McCauley, Bryan M. , Armasu, Sebastian M. , Wang, Chen, Doherty, Jennifer A., Goode, Ellen L. , Köebel, Martin, Atkinson, Hunter J., Doherty, Jennifer A. , Harris, Holly R. , Winham, Stacey J.

Cancer Research | April 3, 2026 | Volume: 86 | Issue: 7_Supplement | Pages: 1184-1184

10.1158/1538-7445.am2026-1184 Get It

Abstract Ovarian endometrioid carcinoma (OEC) is the second most common histotype associated with the most favorable prognosis among ovarian carcinomas. Similar to endometrial carcinoma, OEC exhibit significant molecular diversity. We aimed to develop a practical immunohistochemical (IHC) prognosticator by integrating IHC biomarkers with clinical substage, and surgical outcomes. This multi-institutional study included participants with primary invasive OEC from the Alberta Cancer Registry (AOVT), Mayo Clinic, and Disease of the Ovary and their Evaluation Study (DOVE). Pathology review excluded misclassified high-grade serous and mesonephric carcinomas leaving 422 OEC cases (AOVT N=158; DOVE N=143; Mayo N=121) with available tumor biospecimens who did not receive neoadjuvant treatment. Clinical characteristics included age, stage, grade, residual disease and 5-year survival. Clinical risk group was defined by combining stage and residual disease: Low (FIGO stage IA/IB & no macroscopic disease), Intermediate (stage IC-II& no macroscopic disease), High (stage III/IV or macroscopic disease). Tissue microarrays were stained for TP53, PMS2, MSH6, PGR, and CTNNB1 using IHC and were scored by a single pathologist. Tumors were hierarchically categorized as TP53-abnormal (TP53abn)/PGR-loss, mismatch-repair deficient (MMRd, via PMS2 and MSH6), nuclear-CTNNB1 (nCTNNB1), or no-specific-immunohistochemical-profile (NSIP). Overall survival (OS) at 5 years was compared across clinical risk and biomarker groups using Cox regression, adjusted for age and site to generate hazard ratios (HR), and 5-year survival rates (5-YSR). High clinical risk group was associated with worse 5-year OS compared to low & intermediate risk (p<0.0001). Hierarchical IHC biomarker groups were also associated with 5-year OS, adjusted for age and study site (p<0.0001), with consistently worse survival for combined TP53abn/PGR-loss (n=17, HR=6.07, 95% CI 2.78-13.26), PGR-loss only (n=55, HR=4.17, 95% CI 2.19-7.94), TP53abn only (n=29, HR=2.04, 95% CI 0.85-4.90), and better survival for nuclear-CTNNB1 (n=146, HR=0.22, 95% CI 0.07-0.65) compared to NSIP (n=132). Within the low-risk group, MMRd, nCTNNB1, or NSIP had greater than 97% 5-YSR, while OEC with TP53abn/PGR-loss or PR-loss only had less than 75% 5-YSR. Within the intermediate group, only nCTNNB1 exceeded a 5-YSR of greater than 97%. Within the high-risk group, 5YSR for nCTNNB1 OEC was 90.9%, compared to only 16.7% for TP53abn/PGR-loss. This IHC-based algorithm refines prognosis beyond clinical substage. It identifies low-risk patients with unfavorable prognosis (TP53abn/PGRloss, PGR loss only) who may benefit from adjuvant therapy, and also patients with favorable prognosis within the intermediate group for whom adjuvant therapy could be de-escalated. Further patient selection for chemo vs. hormone therapy in the high-risk group may be improved by biomarkers. Citation Format: Gamaliel Taengwa, Hunter J. Atkinson, Bryan M. McCauley, Sebastian M. Armasu, Chen Wang, Jennifer A. Doherty, Holly R. Harris, Ellen L. Goode, Martin Koebel, Stacey J. Winham. IHC-based prognostic sub-stratification of ovarian endometrioid carcinoma [abstract]. In: Proceedings of the American Association for Cancer Research Annual Meeting 2026; Part 1 (Regular Abstracts); 2026 Apr 17-22; San Diego, CA. Philadelphia (PA): AACR; Cancer Res 2026;86(7 Suppl):Abstract nr 1184.
Abstract 643: The Sean Karl Cohort: An international single-cell RNAseq study of paired patient Ewing sarcoma specimens.
Pannucci, Abbe , Mukherjee, Elina , Daley, Jessica, Ganapathi, Shireen Sita, Surrey, Lea F. , Gutstein, Lauren, Azar, Patrick, Neyaz, Azfar, John, Ivy, Tanaka, Yutaro , Butaney, Byron, Janeway, Katherine A. , Taroni, Jaclyln, Davis, Jade, Laetsch, Theodore W. , Mody, Rajen , Henon, Clémence , Grünewald, Thomas G., Lawlor, Elizabeth R. , Cruz, Filemon S. Dela, Grohar, Patrick J. , Pavisic, Jovana , Hawkins, Ally, Ganapathi, Shireen S. , Boguslawski, Elissa A. , Azar, Patrick, Stockfisch, Emily , Neyaz, Azfar , John, Ivy , Picarsic, Jennifer , Gillani, Riaz , Crompton, Brian D. , Reed, Damon R. , Shlien, Adam , Grünewald, Thomas G. P. , Cruz, Filemon S. Dela , Cillo, Anthony Richard , Bailey, Kelly M.

Cancer Research | April 3, 2026 | Volume: 86 | Issue: 7_Supplement | Pages: 643-643

10.1158/1538-7445.am2026-643 Get It

Abstract Introduction: Ewing sarcoma (EwS) is a FET::ETS family member-driven primary bone cancer demonstrating vast heterogeneity. Between a patient’s primary diagnosis and disease progression, tumor cell state adaptation, microenvironment changes, and the landscape of evolving therapeutic vulnerabilities remain poorly understood. To address these gaps, the Sean Karl Cohort was established in 2025 to conduct the largest single-cell transcriptomic analysis of retrospective paired tumor samples from patients with EwS. Here, we present data from the five analytic teams, and through shared SOPs now expand this cohort to Europe. Methods: Common sample processing SOPs were established to isolate cells from FFPE material from paired patient EwS samples. Single-cell (sc) RNAseq was generated using the GEM-X Flex Gene Expression protocol (10x Genomics). Alex’s Lemonade Stand Foundation (ALSF) Data Lab established a common data processing and integration pipeline with an EwS-specific cell annotation workflow to create a harmonized dataset for downstream analyses. Analytic teams were created to define tumor cell subpopulations and their therapeutic vulnerabilities and to characterize the tumor microenvironment. Data: We demonstrate the feasibility of generating high-quality scRNAseq profiles from retrospective FFPE-preserved EwS tumors. To date, 116 samples have yielded ∼800,000 cells. Integrated analysis reveals reproducible EwS tumor cell states shared across patients with regulatory network analyses nominating candidate therapeutic vulnerabilities. The scale of this international cohort enables saturation analysis for rare cell populations. Paired and longitudinal samples further allow correlation of emergent cell states with therapy resistance and metastatic progression. For example, immune-focused analyses show increases in T cell and macrophage populations in post-therapy samples. A novel, standardized EwS-specific cell annotation workflow has been developed to harmonize analyses and findings. These data will be openly shared with the community through the ALSF Single-cell Pediatric Cancer Atlas Portal. Conclusion: Large-scale international collaborative sample sharing, standardized processing pipelines, and harmonized EwS-specific annotations now enable deep single-cell analyses to characterize tumor heterogeneity in this rare pediatric and adolescent cancer. An in vivo expansion of the Sean Karl Cohort is underway to assess conservation of EwS tumor cell states and regulatory vulnerabilities identified in human tumors pre- and post-therapy in preclinical models, further supporting translation of these findings toward therapeutic strategies. Citation Format: Abbe Pannucci, Elina Mukherjee, Jessica D. Daley, Shireen Sita Ganapathi, Elissa Boguslawski, Lea Surrey, Lauren Gutstein, Patrick Azar, Emily Stockfisch, Azfar Neyaz, Ivy John, Jennifer Picarsic, Yutaro Tanaka, Byron Butaney, Riaz Gillani, Brian D. Crompton, Katherine A. Janeway, Jaclyln Taroni, Jessica Davis, Damon Reed, Adam Shlien, Theodore W. Laetsch, Rajen Mody, Clémence Henon, Thomas G. Grünewald, Elizabeth R. Lawlor, Filemon Dela Cruz, Patrick J. Grohar, Jovana Pavisic, Ally Hawkins, Anthony R. Cillo, Kelly M. Bailey. The Sean Karl Cohort: An international single-cell RNAseq study of paired patient Ewing sarcoma specimens [abstract]. In: Proceedings of the American Association for Cancer Research Annual Meeting 2026; Part 1 (Regular Abstracts); 2026 Apr 17-22; San Diego, CA. Philadelphia (PA): AACR; Cancer Res 2026;86(7 Suppl):Abstract nr 643.
Abstract 899: Building a national network coordination center for clinical trials: Early implementation outcomes from the CP2CT DECC.
Lectora, Laura E., Orozco, Cristina J., Thorson, Holly A., Bonner, Timethia , Freimuth, Robert R., Le-Rademacher, Jennifer, Odedina, Folakemi T., Lectora, Laura, Thorson, Holly, Freimuth, Robert R. , Le‐Rademacher, Jennifer

Cancer Research | April 3, 2026 | Volume: 86 | Issue: 7_Supplement | Pages: 899-899

10.1158/1538-7445.am2026-899 Get It

Abstract Background: Despite the decline in overall mortality and incidence of cancer in the US population, the burden of cancer is still high, especially in underserved and under-researched populations. A major contributor to poor cancer outcomes is the absence of dedicated efforts utilizing scientifically rigorous approaches and implementation strategies to optimize participant enrollment and accrual in clinical trials. The Connecting Patient Populations to Clinical Trials (CP2CT) program implements innovative multilevel interventions to enhance clinical trial awareness and optimize referral pathways that facilitate patient enrollment. The CP2CT Data, Evaluation, and Coordinating Center (DECC) supports its data and evaluation activities, and coordinates a learning collaborative towards mitigating the key barriers of cancer burden in all populations. Methods: Using an implementation science-informed approach, the DECC deployed coordinated strategies over three years: (1) administrative structuring through streamlined governance, centralized reporting, and stakeholder integration; (2) data standardization via Common Data Elements (CDEs), a cross-network REDCap system, and a multi-institution Data Transfer Agreement (DTA); (3) evaluation infrastructure through a Network Logic Model, evaluation plan, standardized constructs, and a Process Evaluation Plan with tools; (4) learning supports through an internal website and expanded Speaker Series; and (5) site-level implementation facilitation through structured visits. Results: In collaboration with the CP2CT Network and NCI, the DECC’s achievements span four domains: (1) Administrative: built infrastructure, deployed centralized reporting platforms, coordinated key meetings, and strengthened community integration. (2) Data: standardized collection, secured network-wide data sharing through the DTA, enabled harmonized multi-site reporting, and advanced groundwork for interoperability and scientific value. (3) Program Evaluation: linked CP2CT activities to measurable outcomes through a Network-wide Logic Model, guided evaluation, established shared evaluation language, and launched a transferable Process Evaluation framework. (4) Learning Collaborative: developed a centralized resource hub, expanded the Speaker Series, and advanced authorship transparency with the CP2CT Publication Policy. < Conclusion: The CP2CT DECC has established a sustainable, scalable infrastructure that integrates administrative coordination, standardized data collection, robust program evaluation, and a collaborative learning environment. These efforts enhance clinical trial awareness, optimize referral pathways, and provide a transferable model for improving participant enrollment and scientific rigor across national research networks, ultimately addressing disparities in cancer outcomes. Citation Format: Laura E. Lectora, Cristina J. Orozco, Holly A. Thorson, Timethia Bonner, Robert R. Freimuth, Jennifer G. Le-Rademacher, Folakemi T. Odedina. Building a national network coordination center for clinical trials: Early implementation outcomes from the CP2CT DECC [abstract]. In: Proceedings of the American Association for Cancer Research Annual Meeting 2026; Part 1 (Regular Abstracts); 2026 Apr 17-22; San Diego, CA. Philadelphia (PA): AACR; Cancer Res 2026;86(7 Suppl):Abstract nr 899.
Abstract 860: Development of and consensus building towards shared metrics, measures and benchmarks for the connecting patient populations to clinical trials (CP2CT).
Odedina, Folakemi T., Le-Rademacher, Jennifer, Freimuth, Robert, Orozco, Cristina, Lectora, Laura, Bonner, Timethia , Thorson, Holly, Le‐Rademacher, Jennifer , Freimuth, Robert R. , Orozco, Cristina J.

Cancer Research | April 3, 2026 | Volume: 86 | Issue: 7_Supplement | Pages: 860-860

10.1158/1538-7445.am2026-860 Get It

Abstract Background: Multidisciplinary research networks often face challenges in harmonizing metrics and measures across participating sites, limiting the ability to aggregate data and generate generalizable insights. To address this barrier within the Connecting Patient Populations to Clinical Trials (CP2CT) Network, the Data, Evaluation, and Coordinating Center (DECC) coordinated the establishment of a unified framework that supports comparable evaluation and enhances the scientific impact of network-wide activities. Methods: Consensus was developed through a structured, iterative, and collaborative process: (1) drafting initial constructs, metrics, measures, and benchmarks informed by Network site materials and relevant literature; (2) soliciting qualitative and quantitative feedback from Network sites via Basecamp, an innovative online collaborative workspace for construct development; (3) conducting open dialogue sessions followed by systematic review and integration of site feedback; and (4) refining all elements through repeated feedback cycles until no further modifications were requested. Each iteration strengthened the clarity, coherence, and scientific precision of the final constructs. Results: A total of seven constructs were incorporated into the consensus-development process: clinical trials referral, clinical trials accrual, participants’ awareness of clinical trials, participants’ knowledge of clinical trials, providers’ awareness of NCI-supported clinical trials, providers’ engagement with NCI-supported clinical trials, and providers’ referral to NCI-supported clinical trials. For each construct, the Network established a conceptual definition (broad description of the construct), an operational definition (specification of how the construct is measured or observed), benchmarks (standards for assessing performance), metrics (quantitative indicators of performance), and measures (tools used to quantify inputs, processes, or outcomes). Common measures were developed for two constructs—clinical trials accrual and participants’ knowledge of clinical trials. Although full consensus was not achieved across all four Network sites for every construct, at least three sites reached consensus for the remaining five constructs. Conclusion: This consensus-building initiative resulted in the development of a unified, scientifically grounded framework. By harmonizing key elements related to clinical trial referral, accrual, awareness, knowledge, and provider engagement, the Network has established foundational tools that enable cross-site data comparability and facilitate more rigorous assessment of efforts to connect diverse patient populations to clinical trials. This framework positions the Network to inform strategies that improve equitable clinical trial participation. Citation Format: Folakemi T. Odedina, Jennifer Le-Rademacher, Robert Freimuth, Cristina Orozco, Laura Lectora, Timethia Bonner, Holly Thorson, Connecting Patient Populations to Clinical Trials(CP2CT) Program Evaluation Work Group, Connecting Patient Populations to Clinical Trials(CP2CT) Steering Committee. Development of and consensus building towards shared metrics, measures and benchmarks for the connecting patient populations to clinical trials (CP2CT) [abstract]. In: Proceedings of the American Association for Cancer Research Annual Meeting 2026; Part 1 (Regular Abstracts); 2026 Apr 17-22; San Diego, CA. Philadelphia (PA): AACR; Cancer Res 2026;86(7 Suppl):Abstract nr 860.
Health Care Use and Outcomes Among Participants Enrolled in the Mayo Clinic Primary Care House Call Program: A Case-Control Study
Takahashi, Paul Y. , Sohn, Bonnie C. , Verdoorn, Brandon P. , Chandra, Anupam , Mohammad, Natalie F, Philpot, Lindsey M. , Havyer, Rachel D. , Roellinger, Daniel , Johnson, Matthew G. , West, Jennifer, Hanson, Gregory J. , Garza, Maria D. Mendoza De la, Mendoza De la Garza, Maria D, Philpot, Lindsey M , Takahashi, Paul , Mohammad, Natalie F. , Hanson, Gregory J., Garza, Maria Mendoza de la

Journal of Primary Care & Community Health | April 3, 2026 | Volume: 17 | Issue: No issue available | Pages: No page available

10.1177/21501319261432120 | PMID 41928581 Get It

Introduction/Objectives: House call programs provide care for homebound patients. We conducted a case-control study to compare hospitalization and/or emergency department (ED) use by patients enrolled in a primary care house call program versus ambulatory (community-dwelling) patients. Methods: Program enrollees (cases) were matched by age and self-reported gender to community-dwelling patients (controls). The primary exposure was the combination of hospitalization and/or ED visits for 1 year before the index date (October 1, 2024). We used unadjusted and adjusted conditional logistic regression to determine differences in health care use. Results: We identified 26 cases (median [range] age, 84 [66-98] years; 16 [62%] female) and 130 controls. All cases had 4 or more chronic diseases, as compared with 87 (67%) of controls ( P = .003). A higher proportion of cases than controls had previous hospitalization and/or ED visits (84.6% vs 27.7%; P < .001). After adjusting for the number of chronic illnesses, no differences in previous hospitalization and/or ED use were identified between groups. Conclusions: Cases had more chronic illnesses and more hospitalizations and/or ED visits than community-dwelling controls. The comorbid health burden of participants in the house call program drove greater health care use and justifies a higher level of care for this medically complex patient population.
Characterization of Oncogenic and Immunogenic Profiling in Patients with Breast Cancer Tumors After Radiation Therapy
Niture, Suryakant , Vargas, Carlos E., Chumsri, Saranya , Kachergus, Jennifer M., Sriramanujam, Sandeepkumar, Thotala, Dinesh , Jaboin, Jerry J. , Seneviratne, Danushka S. , Chumsri, Saranya , Niture, Suryakant K.

International Journal of Molecular Sciences | April 2, 2026 | Volume: 27 | Issue: 7 | Pages: 3227

10.3390/ijms27073227 | PMID 41977410 Get It

Biological heterogeneity among different breast cancer (BC) subtypes results in markedly varying clinical outcomes. Identification and analysis of key gene biomarkers that are differentially regulated during radiation therapy (RT) may pose multiple clinical challenges for BC treatment. The purpose of the study is to identify and analyze the expression of key gene biomarkers and their networks that are differentially regulated after hypofractionated RT. Patients with BC (cT0-T2, N0, M0) were treated with hypofractionated whole breast RT 25 Gy in five fractions, 4 to 8 weeks before breast conservation surgery (BCS). Biopsy (pre-RT; n = 5) and surgical (post-RT; n = 14 or 15) BC tumor samples were used for NanoString targeted sequencing. We identified 165 and 244 differentially expressed genes (DEGs; p < 0.05) in BC tumor samples from BC patients post-RT using the nCounter BC360 and IO360 panels, respectively. Gene networks and pathway analysis revealed that RT increases the gene signature of tumor inflammation (TIS), cytotoxicity, and apoptosis, while downregulating the gene signatures of tumor cell proliferation, differentiation, and cell adhesion, and increases the claudin-low gene score. RT-induced mammary stemness and enhanced infiltration of stroma, mast, and macrophage cells in the BC tumor microenvironment (TME). Further, the nCounter IO360 (immuno-oncology) panel analysis validated the findings of BC360 and demonstrated that RT increased the myeloid inflammation signature and chemokine expression, modulated B, T, NK, and DC cell activities, and enhanced residual cancer burden (RCB) in BC tumors, thus creating an immunosuppressive TME. Collectively, RT sensitized BC tumors by increasing the gene signature of TIS, cytotoxicity, apoptosis, and mammary stemness. RT facilitated an immunosuppressive environment and increased RCB, suggesting that the therapeutic potential of RT is highly individualized for each patient based on their unique tumor biology, genetic makeup, and TME.