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2435 citation(s) found for "Ly, Amy".

Vitreomacular Traction and Age-Related Macular Degeneration
Green-Simms, Amy E., Bakri, Sophie J.

Seminars in Ophthalmology | May 24, 2011 | Volume: 26 | Issue: 3 | Pages: 137-138

10.3109/08820538.2011.559512 | PMID 21609226 Get It

The Selaginella Genome Identifies Genetic Changes Associated with the Evolution of Vascular Plants
Banks, Jo Ann , Nishiyama, Tomoaki , Hasebe, Mitsuyasu , Bowman, John L. , Gribskov, Michael , dePamphilis, Claude W. , Albert, Victor A. , Aono, Naoki, Aoyama, Tsuyoshi , Ambrose, Barbara A. , Ashton, Neil W., Axtell, Michael J. , Barker, Elizabeth I. , Bonawitz, Nicholas D. , Chapple, Clint , Cheng, Chaoyang , Corrêa, Luiz Gustavo Guedes, Dacre, Michael , DeBarry, Jeremy D. , Drèyer, Ingo , Engstrom, Eric M., Estelle, Mark , Feng, Liang , Finet, Cédric , Floyd, Sandra K., Gramzow, Lydia , Harholt, Jesper , Hattori, Mitsuru , Heyl, Alexander , Hirai, Tadayoshi , Hiwatashi, Yuji , Ishikawa, Masaki , Iwata, Mineko, Karol, Kenneth G. , Koehler, Barbara, Kolukisaoglu, Uener, Kubo, Minoru , Kurata, Tetsuya , Lalonde, Sylvie, Li, Kejie , Litt, Amy , Manning, Gerard , Michael, Todd P. , Miyazaki, Saori , Morinaga, Shin‐Ichi, Murata, Takashi, Nelson, David R. , Obara, Mari, Oguri, Yasuko, Olmstead, Richard G. , Onodera, Naoko T., Petersen, Bent Larsen , Pils, Birgit, Prigge, Michael J. , Riaño‐Pachón, Diego Mauricio , Scheller, Henrik Vibe , Schulz, Burkhard , Schulz, Christian , Shakirov, Eugene V. , Shibagaki, Nakako, Shippen, Dorothy E. , Sørensen, Iben , Sotooka, Ryo, Sugimoto, Nagisa , Sugita, Mamoru , Sumikawa, Naomi, Tanurdžić, Miloš , Theißen, Günter, Ulvskov, Peter , Wakazuki, Sachiko, Weng, Jing‐Ke , Willats, William G. T. , Wipf, Daniel , Wolf, Paul G. , Yang, Lixing , Zimmer, Andreas , Zhu, Qihui , Mitros, Therese , Hellsten, Uffe, Loqué, Dominique , Otillar, Robert, Salamov, Asaf, Shapiro, Harris , Lindquist, Erika , Lucas, Susan , Rokhsar, Daniel S. , Grigoriev, Igor V. , Ashton, Neil W., Barker, Michael S. , Bennetzen, Jeffrey L. , Eliáš, Marek , Frommer, Wolf Bernd , Fujita, Tomomichi , Gutensohn, Michael , Li, Ying , Lyons, Eric H. , Maruyama, Takeshi , Mikami, Koji , Murata, Takashi , Mueller‐Roeber, Bernd , Oguri, Yasuko, Rensing, Stefan Andreas , Roberts, Alison W. , Sato, Yoshikatsu , Shinohara, Naoki , Schmutz, Jeremy

Science | May 5, 2011 | Volume: 332 | Issue: 6032 | Pages: 960-963

10.1126/science.1203810 | PMID 21551031 Get It

The genome sequence of a lycophyte hints at ancient evolutionary transitions.
What Is Your Guess? The Case of the Milky White Urine
Block, Darci R , Saenger, Amy K.

Clinical Chemistry | April 28, 2011 | Volume: 57 | Issue: 5 | Pages: 783-784

10.1373/clinchem.2011.161992 | PMID 21527655 Get It

Biologic Variation of a Novel Cardiac Troponin I Assay
Vasile, Vlad C. , Saenger, Amy K., Kroning, Jean M, Klee, George G., Jaffe, Allan S. , Jaffe, Allan S.

Clinical Chemistry | April 26, 2011 | Volume: 57 | Issue: 7 | Pages: 1080-1081

10.1373/clinchem.2011.162545 | PMID 21519039 Get It

National CT Colonography Trial (ACRIN 6664): Comparison of Three Full-Laxative Bowel Preparations in More Than 2500 Average-Risk Patients
Hara, Amy K., Kuo, Mark , Blevins, Meridith , Chen, Mei‐Hsiu , Dachman, Abraham H. , Menias, Christine O. , Siewert, Betina, Cheema, Jugesh I., Obregon, Richard G., Fidler, Jeff L. , Zimmerman, Peter, Horton, Karen M., Iyer, Revathy B., Halvorsen, Robert A., Casola, Giovanna, Johnson, C. Daniel, Yee, Judy , Fidler, Jeff L. , Coakley, Kevin J.

American Journal of Roentgenology | April 21, 2011 | Volume: 196 | Issue: 5 | Pages: 1076-1082

10.2214/ajr.10.4334 | PMID 21512073 Get It

Major Basic Protein from Eosinophils and Myeloperoxidase from Neutrophils Are Required for Protective Immunity to Strongyloides stercoralis in Mice
O’Connell, Amy E. , Hess, Jessica A., Santiago, Gilberto A. , Nolan, Thomas J. , Lok, James B. , Lee, James J. , Abraham, David , O'Connell, Amy E

Infection and Immunity | April 12, 2011 | Volume: 79 | Issue: 7 | Pages: 2770-2778

10.1128/iai.00931-10 | PMID 21482685 Get It

ABSTRACTEosinophils and neutrophils contribute to larval killing during the primary immune response, and neutrophils are effector cells in the secondary response toStrongyloides stercoralisin mice. The objective of this study was to determine the molecular mechanisms used by eosinophils and neutrophils to control infections withS. stercoralis. Using mice deficient in the eosinophil granule products major basic protein (MBP) and eosinophil peroxidase (EPO), it was determined that eosinophils kill the larvae through an MBP-dependent mechanism in the primary immune response if other effector cells are absent. InfectingPHILmice, which are eosinophil deficient, withS. stercoralisresulted in development of primary and secondary immune responses that were similar to those of wild-type mice, suggesting that eosinophils are not an absolute requirement for larval killing or development of secondary immunity. TreatingPHILmice with a neutrophil-depleting antibody resulted in a significant impairment in larval killing. Naïve and immunized mice with neutrophils deficient in myeloperoxidase (MPO) infected withS. stercoralishad significantly decreased larval killing. It was concluded that there is redundancy in the primary immune response, with eosinophils killing the larvae through an MBP-dependent mechanism and neutrophils killing the worms through an MPO-dependent mechanism. Eosinophils are not required for the development or function of secondary immunity, but MPO from neutrophils is required for protective secondary immunity.
Frequent Truncating Mutation of TFAM Induces Mitochondrial DNA Depletion and Apoptotic Resistance in Microsatellite-Unstable Colorectal Cancer
Guo, Jianhui, Wang, Zemin , Wang, Zehua , French, Amy J. , Kang, Dongchon, Chen, Lin, Thibodeau, Stephen N., Li, Zheng , Liu, Wenyong , Liu, Wanguo

Cancer Research | April 5, 2011 | Volume: 71 | Issue: 8 | Pages: 2978-2987

10.1158/0008-5472.can-10-3482 | PMID 21467167 Get It

Abstract The mitochondrial transcription factor A (TFAM) is required for mitochondrial DNA (mtDNA) replication and transcription. Disruption of TFAM results in heart failure and premature aging in mice. But very little is known about the role of TFAM in cancer development. Here, we report the identification of frequent frameshift mutations in the coding mononucleotide repeat of TFAM in sporadic colorectal cancer (CRC) cell lines and in primary tumors with microsatellite instability (MSI), but not in microsatellite stable (MSS) CRC cell lines and tumors. The presence of the TFAM truncating mutation, in CRC cells with MSI, reduced the TFAM protein level in vivo and in vitro and correlated with mtDNA depletion. Furthermore, forced overexpression of wild-type TFAM in RKO cells carrying a TFAM truncating mutation suppressed cell proliferation and inhibited RKO cell-induced xenograft tumor growth. Moreover, these cells showed more susceptibility to cisplatin-induced apoptosis due to an increase of cytochrome b (Cyt b) expression and its release from mitochondria. An interaction assay between TFAM and the heavy-strand promoter (HSP) of mitochondria revealed that mutant TFAM exhibited reduced binding to HSP, leading to reduction in Cyt b transcription. Collectively, these data provide evidence that a high incidence of TFAM truncating mutations leads to mitochondrial copy number reduction and mitochondrial instability, distinguishing most CRC with MSI from MSS CRC. These mutations may play an important role in tumorigenesis and cisplatin-induced apoptotic resistance of most microsatellite-unstable CRCs. Cancer Res; 71(8); 2978–87. ©2011 AACR.
Abstract 3276: Characterization of tumors in mouse oviduct-specific glycoprotein 1(Ogp1) promoter-driven SV40 large T antigen
Ota, Takayo , Clayton, Amy C., Shridhar, Viji , Miyoshi, Ichiro , Chien, Jeremy , Chien, Jeremey

Cancer Research | February 25, 2011 | Volume: 70 | Issue: 8_Supplement | Pages: 3276-3276

10.1158/1538-7445.am10-3276 Get It

Abstract It was well accepted for many years that ovarian surface epithelium is the origin of epithelial ovarian carcinomas. However, recent molecular and pathologic evidence indicate that high-grade serous carcinomas of the ovary, which are the most common type of epithelial carcinomas, may also arise from the distal part of fallopian tubes or tubal carcinoma implants. Gene expression profiles of tubal epithelium from BRCA mutation carriers resemble those of high-grade serous carcinomas of the ovary, and ovarian carcinomas and tubal intraepithelial carcinomas have identical p53 mutations. Oviductal glycoprotein 1 (Ogp1) is a glycosylated protein found in the epithelial cells in the oviduct. So far, Ogp1 is the only specific tubal marker for the oviduct. Ogp1 promoter-driven SV40 large T-antigen transgenic mice develop tumors in the female reproductive organs. To characterize these tumors, we did immunohistochemical analysis in frozen and paraffin-embedded sections. Mice were sacrificed at 8 weeks old. Macroscopically the cervico-vaginal region and the fallopian tubes were markedly enlarged. Histologically, three distinct abnormal proliferations were observed; (i) epithelial hyperplasia with cytologic atypia in the oviduct (with endometrioid architectural and cytologic features), (ii) leiomyosarcomatous proliferation in the myometrium, and (iii) squamous carcinoma in situ in the cervix with extensive papillary architecture. SV40 was expressed in these tumor sites. The oviduct demonstrated weak and spotty p53 expression. The expression of Ogp1 and Pax8 (a marker of the salpingeal secretory cells) in the oviduct epithelium showed patchy pattern. Ogp1 expression was not associated with cellular atypia, while Pax8 was expressed in normal cells. Expression of DNA replication licensing factor, Mini-chromosome maintenance protein 7(MCM7), was also mixed. MCM7 expression was higher in neoplastic cells, but atypical cells had less MCM7 expression. A serous marker, WT1, and a Müllerian-specific epithelial marker, Pax2, showed lower expressions in Ogp1-SV40 transgenic mouse compared to wild type control mouse. WT1 and Pax2 expression were uniform. In ovarian surface epithelium, there was no malignant transformation and no different expression of these markers in control and Ogp1-SV40 mice. In conclusion, this study demonstrated that Ogp1-SV40 transgenic mouse develops abnormal oviductal, myometrial, and cervical proliferations with no involvement of ovaries. Weak and spotty p53 expression in the oviduct indicates that p53 pre-dysfunction status in non-malignant precursor lesions. These results indicate that Ogp1-SV40 transgenic mouse is a useful model for studies involving fallopian and low genital tract carcinogenesis. Citation Format: {Authors}. {Abstract title} [abstract]. In: Proceedings of the 101st Annual Meeting of the American Association for Cancer Research; 2010 Apr 17-21; Washington, DC. Philadelphia (PA): AACR; Cancer Res 2010;70(8 Suppl):Abstract nr 3276.
Abstract 5073: SIAH2 antagonizes the growth-inhibitory activity of the TGFβ signaling pathway and enhances the growth-promoting activity of the RAS signaling pathway during the genesis and progression of human cancer
Edens, Maryanne, Leof, Edward B. , Liao, Yang , Tang, Amy

Cancer Research | February 25, 2011 | Volume: 70 | Issue: 8_Supplement | Pages: 5073-5073

10.1158/1538-7445.am10-5073 Get It

Abstract A better understanding of the antagonistic interaction and cross-talk between the pivotal oncogenic and tumor suppressor signaling pathways, and the concerted cancer signaling networks that control tumorigenesis and metastasis should give rise to novel therapeutic interventions. Hyperactivated ERBB/RAS is known to drive neoplastic transformation, tumorigenesis and metastasis in a large percentage of human cancers, and thus finding novel measures to countervail activated EGFR/HER2/RAS signals to reverse tumorigenesis and metastasis remains an important goal in cancer biology. Instead of targeting an upstream signaling component, we targeted the most downstream signaling module in the ERBB/RAS pathway, the SIAH-dependent proteolytic machinery. SIAHs are evolutionarily conserved RING E3 ligases that are the critical downstream “gatekeeper” signaling modules in the RAS signal transduction pathway. We show that human SIAH E3 ligase is upregulated in proliferating tumor cells in human tumor specimens, and that proper SIAH function is required for RAS signal transduction. By inhibiting SIAH2 E3 ligase, we have blocked both tumorigenesis and metastasis in eleven of the most aggressive human cancer cell lines known in athymic nude mice. Our observations highlight the important roles that SIAH2 plays in RAS-dependent tumorigenesis and metastasis in human cancer. In this study, we aim to identify the molecular mechanism underlying SIAH2 deficiency-mediated growth inhibition in human cancer cells. We have found that SMAD2/3/4 - the essential downstream mediators of TGFβ signaling, are novel SIAH2 substrates in that SIAH2 physically interacts with, ubiquitinates and degrades SMAD2/3/4 (not SMAD1). The identification of SIAH2-mediated SMAD2/3/4 modulation may provide an additional molecular mechanism to explain the well documented, but less understood RAS-TGFβ antagonism described in normal development, tumorigenesis and metastasis. We propose that the tumor promoting activity of SIAH2 may be mediated through the degradation of SMAD2/3/4 proteins which enhancing the growth-promoting activity of the RAS pathway while suppressing the growth inhibitory action of the TGFβ pathway. Since the substrate specificity of ubiquitin-mediated proteolysis is primarily determined by the E3 ligase, our results provide new insights into the role of altered proteolysis in mediating the RAS-TGFβ antagonism and cross-talk observed in the genesis and progression of human cancers. Citation Format: {Authors}. {Abstract title} [abstract]. In: Proceedings of the 101st Annual Meeting of the American Association for Cancer Research; 2010 Apr 17-21; Washington, DC. Philadelphia (PA): AACR; Cancer Res 2010;70(8 Suppl):Abstract nr 5073.
Abstract 4808: SIAH2-dependent proteolysis in cell migration, tumor growth, and cancer metastasis
Schmidt, Rebecca R., Liao, Yang , Walton, Zandra E. , Tang, Amy

Cancer Research | February 25, 2011 | Volume: 70 | Issue: 8_Supplement | Pages: 4808-4808

10.1158/1538-7445.am10-4808 Get It

Abstract The dismal prognosis of patients diagnosed with invasive and metastatic cancer points to our limited arsenal of effective anticancer therapies. The central importance of EGFR/HER2/RAS pathway activation has been well established in neoplastic transformation and tumorigenesis. An important goal in cancer biology is to identify novel and effective means to inhibit activated EGFR/HER2/K-RAS signals and reverse malignant transformation, tumor growth and cancer metastasis. SIAHs are the human homologs of Drosophila Seven-In-Absentia (SINA), an evolutionarily conserved RING E3 ligase that is an essential downstream signaling module and critical “gatekeeper” required for RAS signal transduction in human cancer cells. By targeting the most downstream signaling module identified in the RAS pathway - the SIAH2 proteolytic machinery, we are able to block tumorigenesis and metastasis in multiple of the most aggressive forms of human cancer cells known in athymic nude mice. Although we are fully cognizant of the systemic limitation in the xenograft models and incomplete mimicry of the full-spectrum metastatic processes observed in athymic nude mice, we are encouraged by the impressive anti-SIAH2-based tumor suppression in these preclinical studies. In this study, we aim to identify the molecular mechanism(s) of SIAH2 action in human cancer cells. To delineate SIAH2 function in cancer, through a proteomic approach, we identified three endogenous LIM domain proteins, TRIP6/FHL2/LPXN, as the bona fide SIAH2-interacting proteins isolated from the most aggressive human cancer cell lines (A549, MiaPaCa and MDA-MB-435 cells) in parallel. We provide extensive biochemical evidence to show that TRIP6/FHL2/LPXN are bona fide SIAH2 substrates. These new SIAH2 substrates can successfully rescue cell motility and viability defects observed in SIAH2-deficient cancer cells, suggesting that these focal adhesion proteins may represent one of many diverse signaling modules that function downstream of SIAH2 in mediating aspects of RAS-dependent signaling in normal development and cancer. Our results suggest In response to ERBB/RAS activation, SIAH2 E3 ligase modulates cell junction, adhesion and migration by targeting focal adhesion proteins for ubiquitin-mediated proteolysis to promote cell migration, tumorigenesis and metastasis in human cancer cells. The identification of SIAH2-mediated focal adhesion and cell junction modulation may have important implications in cancer biology to explain the well-documented modulations in focal adhesion, cell junction and motility in response to ERBB/RAS activation in human cancer cells. Citation Format: {Authors}. {Abstract title} [abstract]. In: Proceedings of the 101st Annual Meeting of the American Association for Cancer Research; 2010 Apr 17-21; Washington, DC. Philadelphia (PA): AACR; Cancer Res 2010;70(8 Suppl):Abstract nr 4808.