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541 citation(s) found for "Bailey, GW".

Breast Cancer, Version 4.2026, NCCN Clinical Practice Guidelines In Oncology
Gradishar, W J, Moran, Meena S. , Abraham, Jame , Abramson, Vandana, Aft, Rebecca, Agnese, Doreen, Allison, Kimberly H., Anderson, Bethany, Bailey, Janet, Burstein, Harold J. , Chen, Nan , Chew, Helen, Dang, Chau, Giordano, Sharon H., Goetz, Matthew P., Jankowitz, Rachel C., Javid, Sara H., Leitch, A. Marilyn, LYONS, JANICE, McCloskey, Susie, McShane, Melissa , Patel, Sameer A. , Rosenberger, Laura H., Santa‐Maria, Cesar A. , Schneider, Bryan P., Smith, Mary Lou , Soliman, Hatem, Speers, Corey, Telli, Melinda L. , Wei, Mei , Wisinski, Kari B., Yellala, Amulya, Schonfeld, Ryan, Telli, Melinda L , Gradishar, William John, Abramson, Vandana G. , Agnese, Doreen Marie , Allison, Kimberly H. , Bailey, Janet E., Chew, Helen K. , Elias, Anthony , Giordano, Sharon H. , Goetz, Matthew P. , Jankowitz, Rachel C. , Javid, Sara H. , Leitch, A. Marilyn , Rosenberger, Laura H. , Rugo, Hope S. , Santa-Maria, Cesar Augusto , Schneider, Bryan P. , Soliman, Hatem, Speers, Corey , Wisinski, Kari B. , Yeung, Kay T. , Young, Jessica S. , Kumar, Rashmi

Journal of the National Comprehensive Cancer Network | July 9, 2026 | Volume: 24 | Issue: 7 | Pages: No page available

10.6004/jnccn.2026.0033 | PMID 42425164 Get It

The NCCN Clinical Practice Guidelines for Breast Cancer include recommendations for clinical management of patients with carcinoma in situ, invasive breast cancer, Paget’s disease, Phyllodes tumor, inflammatory breast cancer, and management of breast cancer during pregnancy. The panel convenes annually to update recommendations based on a review of recently published clinical trials. This selection from the NCCN Guidelines for Breast Cancer focuses on the recommendations for the management of recurrent or stage IV (M1) metastatic breast cancer. It summarizes the treatment strategies stratified by tumor biology, including hormone receptor status and HER2 expression, as well as clinical factors such as prior therapy and disease-free interval. Throughout all treatment lines, supportive care, quality of life preservation, toxicity minimization, and clinical trial participation are emphasized as integral components of patient care.
Calcium and Other Electrolyte Management in Patients Undergoing Leukocytapheresis Collections: Review and Recommendations From the American Society for Apheresis Clinical Applications Committee
Williams, Lance A. , Gray, Kristin , Jacob, R. , Sanchez, Amber P. , Bailey, Hanna , Revia, Richard, Thibodeaux, Suzanne R. , Liu, Hien , Annen, Kyle , Godbey, Elizabeth A , Jacob, Reuben P , Sanchez, Amber P , Thibodeaux, Suzanne , Liu, Hien , Annen, Kyle , Godbey, Elizabeth A. , Revia, Richard A.

Journal of Clinical Apheresis | July 3, 2026 | Volume: 41 | Issue: 4 | Pages: No page available

10.1002/jca.70151 | PMID 42397022 Get It

ABSTRACT Collection of hematopoietic progenitor cells and mononuclear cells by leukocytapheresis is a critical step of procuring cellular starting materials for future therapeutic use. Leukocytapheresis requires use of anticoagulant to prevent blood clotting in the extracorporeal circuit during collection. A commonly used anticoagulant is Acid Citrate Dextrose Solution A (ACD‐A). ACD‐A primarily prevents blood clotting by reversibly chelating free ionized calcium, which is essential for the clotting cascade. Electrolytes frequently affected by ACD‐A include calcium, magnesium, potassium, phosphate, and bicarbonate. Risks for development of electrolyte derangements include procedure‐related parameters as well as patient comorbidities. Symptoms range from mild paresthesias to life‐threatening cardiac arrhythmias. Recognition of related signs and symptoms is important for prompt intervention with procedure modification and electrolyte replacement to optimize patient safety. This paper will provide an enhanced understanding of the underlying pathophysiology and assist in timely identification and management of electrolyte abnormalities associated with cellular therapy collections.
Expert Clinical Consensus on Body Surface Gastric Mapping Phenotypes for Gastroduodenal Disorders: ‘Auckland Classification’ v1.0
Varghese, Chris , Dachs, Nicky , Schamberg, Gabriel , Abell, Thomas, Al‐Haddad, Mohammad, Angeli, Timothy R. , Ayubi, Homira , Bashashati, Mohammad , Bulat, Robert, Calder, Stefan, Cederwall, Christopher Brian, Chang, Bianca W. , Cheng, Leo K. , Clarke, John, Daker, Charlotte , Du, Peng, Erickson, Jon, Eriksson, Sven, Fikree, Asma , Foong, Daphne , Fox, Mark, Goenka, Mahesh, Haidry, R, Holtman, Gerald, Hobson, Anthony , Koloski, Natasha, Kuo, Braden, Law, Mikaela, Levinthal, D., Liu, Joy , Mathur, Prateek , Moshiree, Baharak, Ngo, Catherine, Nguyen, Linda, Oblizajek, Nicholas R. , Parkman, Henry P., Podboy, Alexander, Rezaie, Ali, Simmonds, Sam , Sivakumar, Jonathan , Sirimongkolkasem, Jarongkorn , Sonu, Irene, Stocker, Abigail, Sujka, Joseph, Tack, Jan, Weinstein, Douglas, Windsor, John, Zarate‐Lopez, Natalia, Andrews, Christopher N., O'Grady, Greg, Clarke, John O. , Angeli-Gordon, Timothy R , Chang, Bianca , Cheng, Leo K , Daker, Charlotte , Ghoshal, Uday C , Hasler, W L , Ho, Vincent , Keszthelyi, Daniel , Khalsa, Sahib S , Liu, Joy J , Neshatian, Leila , Oblizajek, Nicholas R , Pandanaboyana, Sanjay , Sharma, Amol , Wang, Xiao Jing , Xu, William , Varghese, Chris , Clarke, J , Schamberg, Gabriel , Al‐Haddad, Mohammad , Ayazi, Shahin , Bulat, Robert, Calder, Stefan , Cederwall, Chris, Du, Peng , Erickson, Jonathan C. , Ghoshal, Uday C. , Hasler, William L. , Hayee, Bu , Ho, Vincent , Huang, I‐Hsuan , Khalsa, Sahib S. , Kuo, Braden , Kunkel, David C. , Law, Mikaela , Levinthal, David J. , Moshiree, Baharak , Neshatian, Leila , Parkman, Henry P. , Podboy, Alexander , Rezaie, Ali , Sonu, Irene S. , Stocker, Abigail, Sujka, Joseph , Tack, Jan , Verdonk, Charles , Wang, Xiao Jing , Wongjarupong, Nicha , Xu, William , Andrews, Christopher N. , Gharibans, Armen A.

Neurogastroenterology & Motility | July 1, 2026 | Volume: 38 | Issue: 7 | Pages: No page available

10.1111/nmo.70377 | PMID 42381563 Get It

ABSTRACT Introduction Chronic gastroduodenal disorders remain challenging to manage, and new diagnostic approaches are needed to better delineate underlying causes and guide therapeutic decisions. Body Surface Gastric Mapping (BSGM) technologies combine high‐resolution gastric myoelectrical activity measurements with symptom and psychological profiling to provide mechanistic insights into gastric motor and sensory dysfunction. An International Working Group convened to derive the first consensus classification of BSGM phenotypes (the “Auckland Classification”). Methods A Technical Group conducted a systematic literature and clinical database review to identify objective test biomarkers and candidate disease mechanisms. Evidence was synthesized across 50 studies (primarily in gastroparesis, chronic nausea and vomiting, and functional dyspepsia), and BSGM phenotypes were mapped to existing treatment guidelines. Subsequently, iterative review and development of consensus was performed by a Consensus Group composed of international clinical experts familiar with BSGM. Eleven statements underlying the classification were then derived and circulated as a final survey to establish agreement. Results Six BSGM phenotypes were endorsed: three defined by myoelectrical abnormalities (Dysrhythmic, High Frequency, and Low Meal Response) and three by characteristic symptom associations (Sensorimotor, Continuous, and Delayed Onset Symptoms). Published studies plausibly linked these phenotypes to mechanisms including interstitial cell of Cajal depletion, vagal impairment, hypomotility, visceral hypersensitivity, gut‐brain dysregulation, and small bowel dysfunction. Phenotypes were also mapped to existing mechanism‐based treatment guidelines. Ten out of the eleven statements had > 80% agreement. Conclusions The Auckland Classification, derived by international consensus, presents a structured framework for BSGM‐defined patient phenotypes. Evidence and mechanism‐based treatment options are suggested for each phenotype to provide a foundation for research, further validation, and a pathway for integrating BSGM into clinical care.
Tobacco smoking disrupts bile acid and tryptophan metabolism in multiple sclerosis
Briggs, Farren , Litwiler, Jevin, Montini, Federico , Esfahani, Mahdis, Sagen, Jessica, Nelson, Flavia, Gregory, Simon, Brambilla, Roberta, Bailey, Jessica N Cooke, Schwerdtfeger, Luke , Cox, Laura, Weiner, Howard, Briggs, Farren Bs , McCauley, Jacob L , Tobin, W Oliver , Schwerdtfeger, Luke A , McCauley, Jacob L. , Trapl, Erika , Bailey, Jessica N. Cooke, Cox, Laura M. , Weiner, Howard , Tobin, W. Oliver

Multiple Sclerosis Journal | July 1, 2026 | Volume: 32 | Issue: 9 | Pages: 972-984

10.1177/13524585261454207 | PMID 42383698 Get It

Background: Smokers with multiple sclerosis (MS) experience worse disease, yet underlying mechanisms remain unknown. Smoking disrupts bile acid and tryptophan metabolism in non-MS populations; both pathways involve host–microbiome co-metabolism and have been linked to MS. Objective: Determine whether smoking perturbs these metabolic pathways in MS and whether such alterations statistically mediate smoking’s effect on MS severity. Methods: We analyzed serum bile acid, tryptophan, and tobacco-related metabolites across four independent MS cohorts ( N = 266) using discovery-replication analyses. Mixed-effects regression assessed replicating associations with current smoking and nicotine exposure. Mediation analyses tested if replicating metabolites were potential mediators between smoking and MS severity. Hypothesis-generating metagenomic analyses explored smoking-associated gut–microbial shifts and metabolite correlations. Results: Current smokers and nicotine-exposed MS subjects had reductions in bile acids and tryptophan metabolites, notably indolepropionate, a neuroprotective, anti-inflammatory gut–microbial metabolite. Lower indolepropionate statistically mediated ~20% of smoking’s adverse effect on MS severity. Metagenomic analyses identified potential smoking-enriched MS-linked taxa, and that indolepropionate broadly co-occurs with microbial networks (e.g. Lachnoclostridium appeared inversely associated with indolepropionate in smokers with MS). Conclusion: Tobacco exposure disrupts host–microbiome tryptophan and bile acid metabolism in persons with multiple sclerosis, with indolepropionate depletion partially mediating disease severity, highlighting a potential mechanistic pathway warranting further investigation in MS smokers.
TDP-43 subtypes shape transcriptomic signatures in Alzheimer’s disease
Wang, Xiaojie, Reeves, Madison M, Bejarano, Jesús González , Song, Yuping , Dunmore, Judy, Yue, Mei, Rawlinson, Bailey, DeTure, Michael, Tome, Raul Baena, Narayan, Anand, Bartfield, Jordan, Graff‐Radford, Neill R. , Peterson, Ronald C. , Oskarsson, Björn, Murray, Melissa E, Dickson, DW, Cook, Casey, Zhang, Yongjie, Petrucelli, Leonard , Josephs, Keith A, Walker, Alyssa C. , Reeves, Madison M., Dunmore, Judy H., Yue, Mei, Rawlinson, Bailey, Engelberg-Cook, Erica , DeTure, Michael , Narayan, Anand, Boeve, Bradley F. , Knopman, David S. , Day, Gregory S. , Murray, Melissa E. , Dickson, Dennis W. , Josephs, Keith A. , Prudencio, Mercedes

No container title available | June 26, 2026 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.64898/2026.06.22.733827 | PMID 42395416 Get It

Abstract TAR DNA-binding protein 43 (TDP-43) pathology frequently co-occurs with Tau neurofibrillary tangles (NFTs) and amyloid β plaques in Alzheimer’s disease (AD), driving significant clinical heterogeneity. Whether TDP-43 engages autonomous molecular programs or instead amplifies Tau-driven neurodegeneration remains difficult to resolve, largely because these pathologies often co-occur. To separate these overlapping signatures, we generated regionally resolved transcriptomic profiles from cognitively normal controls (Controls), neuropathologically defined cohorts of AD, AD with limbic-predominant age-related TDP-43 encephalopathy (AD/LATE), and frontotemporal lobar degeneration (FTLD-TDP), categorizing them by their distinct TDP-43 subtypes (types α and β for AD/LATE; types A and B for FTLD-TDP). By integrating transcriptomic profiles with quantitative measures of phosphorylated TDP-43 (pTDP-43) and Tau (pTau), we separated pathology-associated signals within mixed disease contexts. We found that TDP-43 is linked to distinct transcriptomic programs in AD/LATE that are largely uncoupled from Tau burden and diverge from those observed in FTLD-TDP. These signatures showed regional specificity, with transcriptomic remodeling occurring in the amygdala across both diseases, whereas frontal cortex alterations were largely restricted to FTLD-TDP. Furthermore, by stratifying cases by TDP-43 morphological subtype, we unmasked specific biological trajectories, from immune activation to unique cellular vulnerabilities, that are not apparent in unstratified cohorts. Together, our findings provide a framework for decoupling mixed proteinopathies and demonstrate that TDP-43 shapes autonomous, subtype-dependent transcriptional landscapes in AD.
Social Determinants of Health and Patient Experiences During Transitions From Inpatient Rehabilitation to Home
Hamadi, Hanadi , Bailey, Chloe , Manes, Mindi , Paris, Trevor , Kendall, Heather A. , Park, Sinyoung , Hicks-Roof, Kristen, Spaulding, Aaron , Hamadi, Hanadi Y , Bailey, Chloe E , Manes, Mindi R , Xu, Jing , Hicks-Roof, Kristen K

Journal of Patient Experience | June 17, 2026 | Volume: 13 | Issue: No issue available | Pages: No page available

10.1177/23743735261462042 | PMID 42344229 Get It

Transitions from inpatient rehabilitation to home critically affect patient recovery and caregiver well-being. Social determinants of health (SDoH) shape these outcomes yet remain underexamined in rehabilitation settings. The objective of this study was to examine the prevalence of SDoH on patient and caregiver experiences during the first 30 days following discharge from a multi-site inpatient rehabilitation facility in the southeastern United States and explore patterns of patient satisfaction and caregiver burden that can influence care transitions. A prospective cross-sectional descriptive study surveyed 61 patients and 50 caregivers using validated instruments assessing SDoH, communication, discharge preparedness, and caregiver burden. Social isolation, affecting 18% of patients and 10% of caregivers, was the most prevalent challenge. Additional challenges include health literacy and transportation barriers. Caregivers experienced substantial burden: 60% decline in social activities, 50% decreased energy, and 40.9% negative physical health effects. However, 58.1% reported strengthened patient relationships. This study identifies the importance of care continuity and SDoHs after inpatient rehabilitation. Interdisciplinary interventions focused on these key challenges are essential for improving outcomes.
Trends in Otolaryngology Match Dynamics Before and After the USMLE Step 1 Pass/Fail Transition
Allen, David Z. , May, Ryan, Duhon, Bailey H., Rosenthal, J. Walker , Karni, Ron J., Jain, Kunal, Kain, Joshua, Sebelik, Merry, Duhon, Bailey H. , Kain, Joshua J. , Sebelik, Merry

Otolaryngology–Head and Neck Surgery | June 17, 2026 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.1002/ohn.70312 | PMID 42307993 Get It

Abstract Objective To evaluate otolaryngology (ENT) residency match trends before and after the USMLE Step 1 transition to pass/fail. Study Design Observational longitudinal analysis of annual, publicly available specialty‐level data (2010‐2025). Setting National Resident Matching Program (NRMP). Methods Data from 2010 to 2025 were used to calculate applicants per PGY‐1 position, fill rate, and nonmatch‐in‐specialty rate. ENT was compared with plastic surgery, orthopedic surgery, neurological surgery, and general surgery. We used ordinary least squares (OLS), segmented regression with a 2023 breakpoint, and difference‐in‐differences (DID) models. Results From 2010 to 2025, ENT programs increased from 105 to 139 and positions from 280 to 394. Applicants per position ranged from 1.06 to 1.60 (mean 1.38). OLS showed no significant long‐term trend in applicants per position (+0.002/year, P = .86), fill rate (+0.03 percentage points/year, P = .68), or nonmatch‐in‐specialty rate (+0.04 percentage points/year, P = .94). Segmented regression showed no significant post‐2023 changes in applicants per position (slope change +0.03/year, P = .78), and no significant changes in applicant counts ( P = .7). ENT had the largest 2022 to 2023 decline in this cohort, in both applicants (−14.1%) and applicants per position (−16.9%). However, in two‐way fixed‐effects DID models, there was no ENT‐specific post‐transition change in applicants per position ( P > .05 in primary and sensitivity analyses). Conclusion ENT remained highly competitive but trend‐stable from 2010 to 2025. Although 2023 showed a notable drop in applicants, we found no consistent evidence of a sustained ENT‐specific competitiveness shift after the Step 1 pass/fail transition. Level of Evidence 4.
A phase 1b study of xaluritamig (a STEAP1 x CD3 T-cell engager) in pediatric, adolescent, and adult patients with relapsed/refractory (R/R) Ewing sarcoma.
Slotkin, Emily K., Bailey, Kelly, Federman, Noah, Schwartz, Marc A., Bender, Julia Lynne Glade, Grohar, Patrick J., DuBois, Steven G., Slotkin, Emily K. , Mascarenhas, Leo , Bailey, Kelly, Lewin, Jeremy Howard , Federman, Noah , Zhou, Ying, Schwartz, Marc A. , Bender, Julia Lynne Glade, Grohar, Patrick J. , DuBois, Steven G.

Journal of Clinical Oncology | May 28, 2026 | Volume: 44 | Issue: 16_suppl | Pages: No page available

10.1200/jco.2026.44.16_suppl.tps10057 Get It

TPS10057 Background: Ewing sarcoma (EWS) is an aggressive tumor of the bone and soft tissue primarily affecting adolescents and young adults. For patients with recurrent disease, outcomes remain poor with 5-year survival rates of 10%–15%, highlighting the need for novel approaches. STEAP1 is highly expressed in EWS cell lines, xenograft models, and patient tumor samples 1 and is transcriptionally regulated by EWSR1::FLI1 , the main oncogenic driver in EWS. Xaluritamig, a humanized bispecific XmAb 2+1 T-cell engager targeting STEAP1 and CD3, has demonstrated potent, antigen-dependent T-cell–mediated lysis of STEAP1-expressing EWS cell lines 1 and induced robust in vivo antitumor activity in EWS xenograft models with concomitant CD8+ T-cell activation. In metastatic castration-resistant prostate cancer, another STEAP1-expressing solid malignancy, xaluritamig has shown meaningful antitumor activity and a manageable safety profile 2 supporting its clinical evaluation in R/R EWS. Methods: This ongoing, phase 1b, single-arm, open-label, two-part, multicenter study (NCT07297979) is evaluating xaluritamig in pediatric, adolescent, and adult patients with a histologic diagnosis of EWS and an EWSR1 :: ETS fusion gene locally confirmed by next-generation sequencing. Patients must have R/R EWS following ≥1 line of systemic therapy and Karnofsky or Lansky performance status ≥70. Part 1 (dose confirmation) consists of cohort 1 (age ≥12 years) and cohort 2 (age ≥2 to <12 years), and part 2 (dose expansion) includes patients aged ≥2 years with no upper age limit at enrollment. This study includes a 21-day screening period, a treatment period, a safety follow-up period, and a long-term follow-up period. Patients receive xaluritamig every 2 weeks once reaching the target dose until radiographic disease progression per RECIST v1.1, clinical disease progression, unacceptable toxicity, initiation of other anticancer therapy not permitted per protocol, withdrawal of consent, death, or end of study as determined by the sponsor, whichever is earlier. Primary endpoints are safety, tolerability, and determination of recommended dose(s) for expansion. Secondary endpoints are pharmacokinetics, preliminary antitumor activity, and immunogenicity. Biomarker evaluation as an exploratory endpoint includes assessment of serum cytokines, other pro-inflammatory markers, immune-cell subsets, circulating tumor DNA, STEAP1 protein expression, and tumor genomic profile and their association with safety and efficacy. CRS mitigation plan includes step-up dosing, steroid premedication, and administration of interleukin-6 inhibitors as needed. Site activation commenced in January 2026 and enrollment is ongoing. 1. Nolan-Stevaux O. Cancer Res. 2020;80(16_Suppl):DDT02–03. 2. Kelly WK, Danila DC, Lin CC, et al. Cancer Discov . 2024;14(1):76-89. Clinical trial information: NCT07297979 .
Baseline CT-derived QVT score as predictor of bevacizumab benefit in advanced non-squamous NSCLC: A retrospective biomarker analysis of SWOG S0819.
Zhang, Kai , Mutha, Pushkar, Hein, Lauren Bailey, Li, Haojia, Hiremath, Amogh, P, Fu, Velcheti, Vamsidhar, Madabhushi, Anant, Braman, Nathaniel, Mutha, Pushkar , Maghsoudi, Omid Haji , Hiremath, Amogh , Madabhushi, Anant , Braman, Nathaniel

Journal of Clinical Oncology | May 28, 2026 | Volume: 44 | Issue: 16_suppl | Pages: 8549-8549

10.1200/jco.2026.44.16_suppl.8549 Get It

8549 Background: Despite two decades of anti-angiogenic therapy in NSCLC, no predictive biomarker identifies which patients benefit. As VEGF-targeted combinations advance in clinical development, patient selection biomarkers remain a critical unmet need. QVT (Quantitative Vessel Tortuosity) Score is an automated imaging biomarker measuring chaotic tumor vasculature from baseline CT scans and has been shown to be associated with immune checkpoint inhibitor (ICI) outcomes. We hypothesized that QVT Score could identify patients with chaotic angiogenesis tumors and greater sensitivity to anti-angiogenic therapy. Methods: We analyzed a subset of 334 patients from the SWOG S0819 (NCT00946712) trial with treatment-naïve stage IV non-squamous NSCLC receiving carboplatin/paclitaxel with (56%) or without (44%) bevacizumab. QVT Scores were derived from baseline CTs based on radiologist-defined tumor annotations and radiomic features of tumor vasculature (e.g. vessel twisting, curvature, and branching). Overall survival (OS) was evaluated as the primary endpoint using Cox proportional hazards models with QVT × bevacizumab interaction terms. Bevacizumab was non-randomized in S0819 (physician/patient discretion): to address this, we employed doubly robust estimation combining inverse probability of treatment weighting (IPTW) with multivariable covariate adjustment for age, performance status, histology, smoking history, and stage. Results: The QVT Score × bevacizumab interaction was significant (p=0.007, doubly robust estimation) and stayed consistent across sensitivity analyses (p=0.017 multivariable; p=0.047 IPTW), suggesting differential treatment benefit based on pre-treatment vascular phenotype. QVT Score was strongly OS-associated without bevacizumab (HR=3.03, p=0.003) but not with bevacizumab (HR=1.71, p=0.079), consistent with mitigation of high-risk biology. Bevacizumab benefit increased across QVT quartiles (Table 1): patients in the highest quartile had a 60% reduction in mortality (HR=0.40, p<0.001), while patients in the lowest quartile showed no OS benefit (HR=0.89, p=0.64). Conclusions: Despite unfavorable prognosis on standard-of-care therapies (chemotherapy, ICIs), we found that patients with elevated baseline QVT Score may benefit from the addition of anti-angiogenic agents. As VEGF-targeted combinations including bispecific antibodies enter development, radiomic biomarkers may play a crucial role in enriching trial populations and enabling mechanistic longitudinal monitoring. These findings warrant prospective validation in independent randomized clinical trials. Bevacizumab treatment effect by QVT score quartile. QVT Score Quartile N Bevacizumab effect (Hazard Ratio) P Q1 84 0.89 (0.56 -1.42) 0.64 Q2 83 0.70 (0.44-1.12) 0.14 Q3 83 0.54 (0.34-0.85) 0.01 Q4 84 0.40 (0.24-0.65) 0.0003
Landscape of reversion alterations in homologous recombination genes reveals evolutionary constraints
Decker, Brennan, Sisoudiya, Saumya D. , Thornton, James, Cui, Chenming, Solieva, Shahlo , Shi, Tao, Guintini, Fabio, Fleischmann, Zoe, Hartman, Mark, Bailey, Shannon T., Leibowitz, Jeffrey , Sokol, Ethan S, Schrock, Alexa B. , Couch, Fergus J, Reiss, Kim A, Domchek, Susan M, Sivakumar, Smruthy, Decker, Brennan , Cui, Chenming , Harada, Taku, Madison, Russell W. , Datta, Arindam , Fleischmann, Zoe , Frampton, Garrett M. , Couch, Fergus J. , Reiss, Kim A. , Domchek, Susan M. , Bowman, Gregory R. , Greenberg, Roger A. , Nathanson, Katherine L.

No container title available | May 22, 2026 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.64898/2026.05.19.726319 Get It

ABSTRACT Reversion mutations (REVs) restore homologous recombination repair (HRR) and confer resistance to PARP inhibitors (PARPi) in HR-deficient cancers. Yet, their prevalence, mechanisms, and biological constraints remain undefined. We analyzed genomic profiling of 609,464 tissue and liquid biopsy samples across multiple cancer types to delineate the pan-cancer landscape of REVs. REVs were identified in eight HRR genes, most frequently BRCA2 and BRCA1 and notably never in ATM or CHEK2 . REVs exclusively impacted truncating pathogenic variants, predominantly through large in-frame and exon-level deletions, associated with repetitive sequences. Conserved functional domains are relatively depleted of REVs. Structural modeling and functional studies support that exon-level deletions preserve critical domain architecture and confer PARPi resistance. The study establishes HRR reversion as a structurally permissive, yet evolutionarily constrained, resistance mechanism with implications on response, monitoring, and therapeutic strategy. One Sentence Summary Homologous recombination reversion evolves through structurally tolerated, microhomology-driven alterations that restore DNA repair under therapeutic selection across cancers.