Back to Authors

Schamberg, Gabriel

https://orcid.org/0000-0002-4188-9614

Mayo Clinic

Alimetry Ltd, Auckland, New Zealand

Citations 9

Uncertainty-Aware Deep Learning Automates Artifact Correction for Clinical Body Surface Gastric Mapping at Scale
Schamberg, Gabriel , Dachs, Nicky , Teh, Hui Yie , Waite, Stephen, Varghese, Chris , O’Grady, Gregory , Varghese, Chris , Schamberg, Gabriel , Waite, Stephen , Gharibans, Armen A.

No container title available | July 10, 2026 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.64898/2026.07.08.26357335 Get It

Abstract Body surface gastric mapping (BSGM) enables non-invasive measurement of gastric electrophysiology, but the signals are approximately 100 times weaker than cardiac potentials and overlap spectrally with motion artifacts, necessitating labor-intensive manual review that limits clinical scalability. We present an uncertainty-aware deep learning framework combining a signal reconstruction network with a parallel uncertainty estimation network to automate artifact correction in high-resolution BSGM. Models were trained on 2,398 multihour, 64-channel recordings from 27 international clinical sites using weak supervision, a physiology-aware loss function, and uncertainty-gated quality control. In an independent cohort of 127 patients, the system achieved relative reductions of 39% in signal reconstruction error, 9% in total data removed, and 23% in amplitude–movement correlation compared with the industry-standard Wiener filter. Improved signal fidelity altered automated clinical phenotyping in 7% of patients by recovering previously obscured gastric rhythms. Uncertainty-aware deep learning enables reliable automated artifact correction in body-surface gastric mapping, improving signal fidelity and enabling scalable clinical interpretation. The system is FDA-cleared (510(k) K252504) and deployed in clinical practice, demonstrating that data-driven artifact correction can meet regulatory requirements for medical devices and reduce dependence on specialist manual review.
Expert Clinical Consensus on Body Surface Gastric Mapping Phenotypes for Gastroduodenal Disorders: ‘Auckland Classification’ v1.0
Varghese, Chris , Dachs, Nicky , Schamberg, Gabriel , Abell, Thomas, Al‐Haddad, Mohammad, Angeli, Timothy R. , Ayubi, Homira , Bashashati, Mohammad , Bulat, Robert, Calder, Stefan, Cederwall, Christopher Brian, Chang, Bianca W. , Cheng, Leo K. , Clarke, John, Daker, Charlotte , Du, Peng, Erickson, Jon, Eriksson, Sven, Fikree, Asma , Foong, Daphne , Fox, Mark, Goenka, Mahesh, Haidry, R, Holtman, Gerald, Hobson, Anthony , Koloski, Natasha, Kuo, Braden, Law, Mikaela, Levinthal, D., Liu, Joy , Mathur, Prateek , Moshiree, Baharak, Ngo, Catherine, Nguyen, Linda, Oblizajek, Nicholas R. , Parkman, Henry P., Podboy, Alexander, Rezaie, Ali, Simmonds, Sam , Sivakumar, Jonathan , Sirimongkolkasem, Jarongkorn , Sonu, Irene, Stocker, Abigail, Sujka, Joseph, Tack, Jan, Weinstein, Douglas, Windsor, John, Zarate‐Lopez, Natalia, Andrews, Christopher N., O'Grady, Greg, Clarke, John O. , Angeli-Gordon, Timothy R , Chang, Bianca , Cheng, Leo K , Daker, Charlotte , Ghoshal, Uday C , Hasler, W L , Ho, Vincent , Keszthelyi, Daniel , Khalsa, Sahib S , Liu, Joy J , Neshatian, Leila , Oblizajek, Nicholas R , Pandanaboyana, Sanjay , Sharma, Amol , Wang, Xiao Jing , Xu, William , Varghese, Chris , Clarke, J , Schamberg, Gabriel , Al‐Haddad, Mohammad , Ayazi, Shahin , Bulat, Robert, Calder, Stefan , Cederwall, Chris, Du, Peng , Erickson, Jonathan C. , Ghoshal, Uday C. , Hasler, William L. , Hayee, Bu , Ho, Vincent , Huang, I‐Hsuan , Khalsa, Sahib S. , Kuo, Braden , Kunkel, David C. , Law, Mikaela , Levinthal, David J. , Moshiree, Baharak , Neshatian, Leila , Parkman, Henry P. , Podboy, Alexander , Rezaie, Ali , Sonu, Irene S. , Stocker, Abigail, Sujka, Joseph , Tack, Jan , Verdonk, Charles , Wang, Xiao Jing , Wongjarupong, Nicha , Xu, William , Andrews, Christopher N. , Gharibans, Armen A.

Neurogastroenterology & Motility | July 1, 2026 | Volume: 38 | Issue: 7 | Pages: No page available

10.1111/nmo.70377 Get It

ABSTRACT Introduction Chronic gastroduodenal disorders remain challenging to manage, and new diagnostic approaches are needed to better delineate underlying causes and guide therapeutic decisions. Body Surface Gastric Mapping (BSGM) technologies combine high‐resolution gastric myoelectrical activity measurements with symptom and psychological profiling to provide mechanistic insights into gastric motor and sensory dysfunction. An International Working Group convened to derive the first consensus classification of BSGM phenotypes (the “Auckland Classification”). Methods A Technical Group conducted a systematic literature and clinical database review to identify objective test biomarkers and candidate disease mechanisms. Evidence was synthesized across 50 studies (primarily in gastroparesis, chronic nausea and vomiting, and functional dyspepsia), and BSGM phenotypes were mapped to existing treatment guidelines. Subsequently, iterative review and development of consensus was performed by a Consensus Group composed of international clinical experts familiar with BSGM. Eleven statements underlying the classification were then derived and circulated as a final survey to establish agreement. Results Six BSGM phenotypes were endorsed: three defined by myoelectrical abnormalities (Dysrhythmic, High Frequency, and Low Meal Response) and three by characteristic symptom associations (Sensorimotor, Continuous, and Delayed Onset Symptoms). Published studies plausibly linked these phenotypes to mechanisms including interstitial cell of Cajal depletion, vagal impairment, hypomotility, visceral hypersensitivity, gut‐brain dysregulation, and small bowel dysfunction. Phenotypes were also mapped to existing mechanism‐based treatment guidelines. Ten out of the eleven statements had > 80% agreement. Conclusions The Auckland Classification, derived by international consensus, presents a structured framework for BSGM‐defined patient phenotypes. Evidence and mechanism‐based treatment options are suggested for each phenotype to provide a foundation for research, further validation, and a pathway for integrating BSGM into clinical care.
FP47 Adolescent normative values for body surface gastric mapping: spectral analysis
Schamberg, Gabriel, Xu, Binghong, Dachs, Nicky , Foong, Daphne , Varghese, Chris, Andrews, Christopher N, Mousa, Hayat, Gharibans, Armen, O’Grady, Gregory, Humphrey, Gayl , Schamberg, Gabriel , Varghese, Chris , Andrews, Christopher N. , Mousa, Hayat M. , Gharibans, Armen A.

Flash Posters | June 23, 2026 | Volume: No volume available | Issue: No issue available | Pages: A79.2-A80

10.1136/gutjnl-2026-bsg.123 Get It

Adolescent Normative Intervals for Body Surface Gastric Mapping: Spectral Analysis
Humphrey, Gayl , Schamberg, Gabriel , Xu, Binghong , Dachs, Nicky , Foong, Daphne , Varghese, Chris, Andrews, C N, O'Grady, Gregory, Schamberg, Gabriel , Varghese, Chris , Mousa, Hayat M. , Gharibans, Armen A.

Neurogastroenterology & Motility | March 12, 2026 | Volume: 38 | Issue: 3 | Pages: No page available

10.1111/nmo.70282 Get It

ABSTRACT Background Body surface gastric mapping (BSGM) non‐invasively assesses gastric myoelectrical activity along with real‐time symptom reporting. In adults, the development of normative intervals has underpinned new explanatory phenotypes, aiding clinical decision‐making. This study established normative reference intervals for adolescent BSGM metrics. Methods Healthy adolescents aged 12–17 years with a BMI ≤ 35 kg/m 2 were recruited from New Zealand, Australia, and the United States. BSGM using Gastric Alimetry (Alimetry, New Zealand) involved a 30‐min fast, followed by a 480‐kcal meal, and a 4‐h postprandial recording. Reference intervals were calculated for four validated metrics: Principal Gastric Frequency (PGF), body mass index (BMI)‐adjusted amplitude, Gastric Alimetry Rhythm Index (GA‐RI, indicating rhythm stability), and the fed: fasted amplitude ratio (ff‐AR). Results were reported at the median and 5th and/or 95th percentiles as appropriate. Key Results A total of 107 participants (52.8% female, median age 14 [IQR 13–16], median BMI 20.1 [IQR 18.75–22.40]) with mixed ethnicities were included. No substantive correlations were observed between BSGM metrics and demographics or anthropometric data. Therefore, a single set of normative reference intervals was established. Median PGF was 3.06 cycles per minute; reference interval 2.72–3.37. Median BMI‐adjusted amplitude was 37.80 μV; reference interval 20.0–72.0. Median GA‐RI was 0.51; reference interval ≥ 0.22. Median ff‐AR was 2.12; reference interval ≥ 1.0. Conclusions and Inferences This study presents normative reference intervals for BSGM spectral metrics in adolescent populations, informing the interpretation of tests in research and clinical practice.
Class imbalance correction in artificial intelligence models leads to miscalibrated clinical predictions: a real-world evaluation
Roesler, Mathias W. , Wells, Cameron, Schamberg, Gabriel, Gao, Junyi , Harrison, Ewen, O'Grady, Gregory, Varghese, Chris , Harrison, Ewen M. , Schamberg, Gabriel , Harrison, Ewen

No container title available | March 5, 2026 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.64898/2026.03.04.26347634 Get It

Background Predictive models employing machine learning algorithms are increasingly being used in clinical decision making, and improperly calibrated models can result in systematic harm. We sought to investigate the impact of class imbalance correction, a commonly applied preprocessing step in machine learning model development, on calibration and modelled clinical decision making in a large real-world context. Methods A histogram boosted gradient classifier was trained on a highly imbalanced national dataset of >1.8 million patients undergoing surgery, to predict the risk of 90-day mortality and complications after surgery. Class imbalance correction strategies including random oversampling, synthetic minority oversampling technique, random under-sampling, and cost-sensitive learning were compared to the natural distribution ('natural'). Models were tested and compared with classification metrics, calibration plots, decision curve analysis, and simulated clinical impact analysis. Results The natural model demonstrated high performance (AUROC 0.94, 95% CI 0.94--0.95 for mortality; 0.84, 95% CI 0.84--0.85 for complications) and calibration (log loss 0.05, 95% CI 0.04--0.05 for mortality; 0.23, 95% CI 0.23--0.24 for complications). Class imbalance mitigation (CSL, ROS, RUS, and SMOTE) did not improve AUROC or AUPRC but increased recall and F1 scores at the expense of precision and accuracy. However, these methods severely compromised model calibration, leading to significant over-prediction of risks (up to a 62.8 % increase) as further evidenced by increased log loss across all mitigation techniques. Decision curve analysis and clinical scenario testing confirmed that the natural model provided the highest net benefit. Conclusion Class imbalance correction methods result in significant miscalibration, leading to possible harm whenused for clinical decision making.
Autonomic Dysfunction in Gastroduodenal Disorders Evaluated Through Multimodal Non-Invasive Physiological Testing
Varghese, Chris , Zhou, Wendy , Schamberg, Gabriel , Hove, Sibylle Van, Clarke, John, O’Grady, G., Neshatian, Leila , Nguyen, Linda, Clarke, John O. , Varghese, Chris , Gharibans, Armen A , Schamberg, Gabriel , Van Hove, Sibylle , O'Grady, Gregory , Neshatian, Leila , Clarke, J , Gharibans, Armen A. , Nguyen, Linda Anh B.

American Journal of Gastroenterology | February 12, 2026 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.14309/ajg.0000000000003958 Get It

INTRODUCTION: Chronic gastroduodenal disorders are highly prevalent and encompass heterogeneous pathophysiology. Autonomic dysfunction may contribute, but its relative contribution to disease pathophysiology and symptoms is unclear. This study aimed to clarify the contributions of autonomic dysfunction in gastroduodenal disorders and symptom associations using multimodal testing, hypothesizing that distinct disorder subgroups would be revealed. METHODS: This prospective observational cohort study included 80 patients with chronic gastroduodenal symptoms. Participants underwent expert clinician-led autonomic evaluation, body surface gastric mapping (BSGM; Gastric Alimetry, New Zealand), and gastric emptying scintigraphy testing. BSGM phenotyping, gastric emptying cutoffs, and autonomic criteria followed standard criteria. RESULTS: Gastroparesis was diagnosed in 27 (33.8%) patients. Autonomic dysfunction was present in 21 (26.3%) patients, and abnormal BSGM in 20 (25%). Autonomic dysfunction and abnormal BSGM were both more prevalent in gastroparesis (51.9% vs 13.2%, P = 0.001; and 44.4% vs 15.1%, P = 0.005, respectively). However, these diagnoses tended not to overlap, with patients having autonomic dysfunction generally exhibiting normal BSGM tests. Autonomic dysfunction independently predicted delayed gastric emptying (OR 13.8, P < 0.001) and was associated with earlier meal responses (higher meal response ratio, P = 0.04) and worse postprandial distress symptoms ( P < 0.05). DISCUSSION: Autonomic dysfunction independently predicted delayed gastric emptying and revealed a gastroparesis mechanism distinct from gastric myoelectrical impairment. Autonomic dysfunction altered the postprandial gastric motor response and was associated with a greater symptom burden. Multimodal physiological testing including autonomic profiling reveals distinct mechanistic subgroups in patients with chronic gastroduodenal symptoms.
Relationship Between Intragastric Meal Distribution, Gastric Emptying, and Gastric Neuromuscular Dysfunction in Chronic Gastroduodenal Disorders
Varghese, Chris , Foong, Daphne , Schamberg, Gabriel , Anand, Reena, Andrews, Christopher N. , Maurer, Alan H., Abell, Thomas L. , O’Grady, Gregory , Gharibans, Armen A , Schamberg, Gabriel , Abell, T L , Parkman, H P , O'Grady, Gregory , Varghese, Chris , Gharibans, Armen A. , Calder, Stefan , Ho, Vincent , Andrews, Christopher N. , Maurer, Alan H. , Parkman, Henry P.

Neurogastroenterology & Motility | September 22, 2025 | Volume: 38 | Issue: 1 | Pages: No page available

10.1111/nmo.70170 Get It

ABSTRACT Background Chronic gastroduodenal symptoms arise from heterogeneous gastric motor dysfunctions. This study applied multimodal physiological testing using gastric emptying scintigraphy (GES) with intragastric meal distribution (IMD) and Gastric Alimetry body surface gastric mapping (BSGM) to define motility and symptom associations. Methods Patients with chronic gastroduodenal symptoms underwent simultaneous supine GES and BSGM with a 30 m baseline, 99mTC‐labeled egg meal, and 4 h postprandial recording. IMD (ratio of counts in the proximal half of the stomach to the total gastric counts) was calculated immediately after the meal (IMD0), with < 0.568 defining abnormal IMD. BSGM phenotyping followed a consensus approach, based on normative spectral reference intervals. Results Among 67 patients (84% female, median age 40 years, median BMI 24 kg/m 2 ), median IMD0 was 0.76 (IQR: 0.69–0.86) with 5 (7.5%) meeting abnormal IMD criteria. Delayed gastric emptying ( n = 18) was associated with higher IMD0 (median 0.9 vs. 0.7, p = 0.004). On BSGM, 15 patients had abnormal spectrograms (5 [7.5%] high frequency and 10 [14.9%] low rhythm stability and/or amplitude); and in these patients, higher IMD0 (proximal retention) strongly correlated to delayed BSGM meal responses ( R = −0.71, p = 0.003). Lower IMD, indicating antral distribution, correlated with higher gastric frequencies ( R = −0.27, p = 0.03). BSGM abnormalities paired with abnormal IMD were associated with worse dyspeptic symptoms. Conclusion Proximal retention of food as assessed by IMD correlated with delayed emptying, and in the presence of neuromuscular spectral abnormalities (abnormal frequencies or rhythms), delayed motility responses on BSGM. Patients with multiple motor abnormalities experience worse dyspeptic symptoms.
Predicting Symptomatic Response to Prokinetic Treatment Using Gastric Alimetry
Varghese, Chris , Hove, Sibylle Van, Schamberg, Gabriel , Wu, Billy, Poonawala, Nooriyah, Law, Mikaela , Dachs, Nicky , Johnston, Gen, Fitt, India, Foong, Daphne , Andrews, Christopher N. , O’Grady, Gregory , Parkman, H P , Abell, T L , O'Grady, Gregory , Varghese, Chris , Schamberg, Gabriel , Johnston, Gen, Parkman, Henry P. , Abell, Thomas L. , Ho, Vincent , Calder, Stefan , Gharibans, Armen A. , Andrews, Christopher N.

Neurogastroenterology & Motility | July 30, 2025 | Volume: 37 | Issue: 11 | Pages: No page available

10.1111/nmo.70132 Get It

ABSTRACT Background Chronic neurogastroduodenal disorders are challenging to manage, with therapy often initiated on a trial and error basis. Prokinetics play a significant role in management, but responses are variable and have been associated with adverse events, impacting widespread use. We investigated whether body surface gastric mapping (BSGM) biomarkers (using Gastric Alimetry) could inform patient selection for prokinetic therapy. Methods Patients with chronic gastroduodenal symptoms taking oral prokinetic agents, regardless of gastric emptying status, were prospectively recruited and underwent BSGM (30 m baseline, 482 kcal standardized meal, 4 h postprandial recording) while off‐prokinetic agents. Patients were followed up with daily symptom diaries. A subset was compared to matched patients not taking prokinetic agents. Prokinetic responders were defined based on symptom improvement greater than a minimum clinically important difference methodology. Key Results Forty‐two patients (88% female; median age 36; median BMI 26) taking prokinetics were analyzed. Prokinetic prescribing, compared to matched patients, was independent of BSGM metrics ( p > 0.15). In patients on existing prokinetics (withheld for BSGM), lower amplitudes predicted reduced symptom burden, whereas low rhythm stability predicted a worse symptom burden ( p < 0.05). In prokinetic‐naive patients (i.e., started on a prokinetic during the study), a lower postprandial amplitude predicted responders (mean 37.5 ± 10.6 uV in responders [ n = 5] vs. mean 54.8 ± 6.6 uV among nonresponders [ n = 3], p = 0.047). Conclusions Gastric Alimetry biomarkers may help in the prediction of prokinetic response in patients with chronic gastroduodenal symptoms. Lower postprandial amplitudes, indicating a reduced meal response, appear to predict benefit, while impaired rhythm stability predicted poorer therapeutic response.
Gastric dysfunction in patients with chronic nausea and vomiting syndromes defined by a noninvasive gastric mapping device
Gharibans, Armen A. , Calder, Stefan , Varghese, Chris , Waite, Stephen , Schamberg, Gabriel , Daker, Charlotte , Du, Peng , Carson, D A, Woodhead, Jonathan S. T., Farrugia, Gianrico , Windsor, John A. , Andrews, Christopher N. , O’Grady, Greg, Alighaleh, Saeed , Carson, Daniel , Farrugia, Gianrico , O'Grady, Gregory , Varghese, Chris , Gharibans, Armen A , Andrews, Christopher N , Schamberg, Gabriel , Daker, Charlotte

Science Translational Medicine | September 21, 2022 | Volume: 14 | Issue: 663 | Pages: No page available

10.1126/scitranslmed.abq3544 Get It

Chronic nausea and vomiting syndromes (NVSs) are prevalent and debilitating disorders. Putative mechanisms include gastric neuromuscular disease and dysregulation of brain-gut interaction, but clinical tests for objectively defining gastric motor function are lacking. A medical device enabling noninvasive body surface gastric mapping (BSGM) was developed and applied to evaluate NVS pathophysiology. BSGM was performed in 43 patients with NVS and 43 matched controls using Gastric Alimetry (Alimetry), a conformable high-resolution array (8 × 8 electrodes; 20-mm interelectrode spacing), wearable reader, and validated symptom-logging app. Continuous measurement encompassed a fasting baseline (30 minutes), 482-kilocalorie meal, and 4-hour postprandial recording, followed by spectral and spatial biomarker analyses. Meal responses were impaired in NVS, with reduced amplitudes compared to controls (median, 23.3 microvolts versus 38.0 microvolts, P < 0.001), impaired fed-fasting power ratios (1.1 versus 1.6, P = 0.02), and disorganized slow waves (spatial frequency stability, 13.6 versus 49.5; P < 0.001). Two distinct NVS subgroups were evident with indistinguishable symptoms (all P > 0.05). Most patients (62%) had normal BSGM studies with increased psychological comorbidities (43.5% versus 7.7%; P = 0.03) and anxiety scores (median, 16.5 versus 13.0; P = 0.035). A smaller subgroup (31%) had markedly abnormal BSGM, with biomarkers correlating with symptoms (nausea, pain, excessive fullness, early satiety, and bloating; all r > 0.35, P < 0.05). Patients with NVS share overlapping symptoms but comprise distinct underlying phenotypes as revealed by a BSGM device. These phenotypes correlate with symptoms, which should inform clinical management and therapeutic trial design.