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Fonseca, Rafael

0000-0002-5938-3769

Mayo Clinic

Mayo Clinic

Citations 79

Biologic and genetic characterization of the novel amyloidogenic lambda light chain–secreting human cell lines, ALMC-1 and ALMC-2
Arendt, Bonnie K., Ramı́rez-Alvarado, Marina , Sikkink, Laura A., Keats, Jonathan J. , Ahmann, Gregory , Dispenzieri, Angela , Fonseca, Rafaël , Ketterling, Rhett P. , Knudson, Ryan A., Mulvihill, Erin M., Tschumper, Renee C. , Wu, Xiaosheng , Zeldenrust, Steven R., Jelinek, Diane F., Dispenzieri, Angela , Ramirez-Alvarado, Marina , Ketterling, Rhett P , Keats, Jonathan J , Fonseca, Rafael

Blood | June 21, 2008 | Volume: 112 | Issue: 5 | Pages: 1931-1941

10.1182/blood-2008-03-143040 Get It

AbstractPrimary systemic amyloidosis (AL) is a rare monoclonal plasma cell (PC) disorder characterized by the deposition of misfolded immunoglobulin (Ig) light chains (LC) in vital organs throughout the body. To our knowledge, no cell lines have ever been established from AL patients. Here we describe the establishment of the ALMC-1 and ALMC-2 cell lines from an AL patient. Both cell lines exhibit a PC phenotype and display cytokine-dependent growth. Using a comprehensive genetic approach, we established the genetic relationship between the cell lines and the primary patient cells, and we were also able to identify new genetic changes accompanying tumor progression that may explain the natural history of this patient's disease. Importantly, we demonstrate that free lambda LC secreted by both cell lines contained a beta structure and formed amyloid fibrils. Despite absolute Ig LC variable gene sequence identity, the proteins show differences in amyloid formation kinetics that are abolished by the presence of Na2SO4. The formation of amyloid fibrils from these naturally secreting human LC cell lines is unprecedented. Moreover, these cell lines will provide an invaluable tool to better understand AL, from the combined perspectives of amyloidogenic protein structure and amyloid formation, genetics, and cell biology.
Phase I, Pharmacokinetic and Pharmacodynamic Study of the Anti–Insulinlike Growth Factor Type 1 Receptor Monoclonal Antibody CP-751,871 in Patients With Multiple Myeloma
Lacy, Martha Q. , Alsina, Melissa , Fonseca, Rafaël , Paccagnella, M. Luisa, Melvin, C., Yin, Donghua, Sharma, Amarnath , Pollak, Michaël , Richardson, Paul G. , Gualberto, Antonio , Enriquez‐Sarano, Maurice , Jagannath, Sundar , Richardson, Paul Gerard Guy , Pollak, Michael N , Enriquez-Sarano, Maurice , Gualberto, Antonio , Fonseca, Rafael

Journal of Clinical Oncology | May 13, 2008 | Volume: 26 | Issue: 19 | Pages: 3196-3203

10.1200/jco.2007.15.9319 Get It

PurposeA phase I first-in-human study was conducted to characterize the safety, tolerability, pharmacokinetic, and pharmacodynamic properties of the anti–insulinlike growth factor 1 receptor (IGF-IR) monoclonal antibody CP-751,871.Patients and MethodsAfter informed consent and screening, 47 patients with multiple myeloma in relapse or refractory phase were enrolled into 11 dose-escalation cohorts of CP-751,871 at doses from 0.025 to 20 mg/kg for 4 weeks. Patients with less than a partial response to CP-751,871 treatment were eligible to receive CP-751,871 in combination with oral dexamethasone at the discretion of the investigator. Treatment with CP-751,871 and rapamycin with or without dexamethasone was also offered to patients enrolled in the 10 and 20 mg/kg cohorts with less than a partial response to initial therapy with single-agent CP-751,871.ResultsNo CP-751,871-related dose-limiting toxicities were identified. Plasma CP-751,871 concentrations increased with dose and concentration-time profiles were consistent with those of antibodies with target-mediated disposition. Importantly, CP-751,871 administration led to a decrease in granulocyte IGF-IR expression and serum insulinlike growth factor 1 accumulation at high doses, suggesting systemic IGF-IR inhibition. Tumor response was assessed according to the European Group for Blood and Marrow Transplantation criteria. Nine responses were reported in 27 patients treated with CP-751,871 in combination with dexamethasone. Of interest, two of the patients with a partial response were progressing from dexamethasone treatment at study entry.ConclusionThese data indicate that CP-751,871 is well tolerated and may constitute a novel agent in the treatment of multiple myeloma.
Effect of Tissue Shipping on Plasma Cell Isolation, Viability, and RNA Integrity in the Context of a Centralized Good Laboratory Practice–Certified Tissue Banking Facility
Ahmann, Gregory , Henderson, Kimberly J., Price-Troska, Tammy, DeGoey, Roberta, Timm, Michael, Dispenzieri, Angela , Greipp, Philip R., Sable-Hunt, Alicia, Bergsagel, Leif, Fonseca, Rafaël , Bergsagel, P. Leif , Chng, Wee Joo , Bergsagel, P. Leif , Dispenzieri, Angela , Fonseca, Rafael

Cancer Epidemiology, Biomarkers & Prevention | March 18, 2008 | Volume: 17 | Issue: 3 | Pages: 666-673

10.1158/1055-9965.epi-07-2649 Get It

Abstract The Multiple Myeloma Research Consortium has established a tissue bank for the deposition of bone marrow samples from patients with multiple myeloma to be mailed and processed under good laboratory practices. To date, over 1,000 samples have been collected. At this time, limited information is available on shipped bone marrow aspirates in regards to cell viability, yield, purity, and subsequent RNA yield and quality. To test these determinants, we did a pilot study on behalf of the Multiple Myeloma Research Consortium where samples were drawn at Mayo Clinic Rochester (MCR) pooled and split into two equal aliquots. One-half of each sample was processed following good laboratory practices compliant standard operating procedures, immediately after sample procurement, at MCR. The CD138+ cells were stored at -80°C as a Trizol lysate. The other half of the aspirate was sent overnight to Mayo Clinic Scottsdale where they were processed using identical standard operating procedures. The RNA was extracted and analyzed in a single batch at MCR. At both locations, samples were assayed for the following quality determinants: Viability was assessed using a three-color flow cytometric method (CD45, CD38, and 7-AAD). Cell counts were done to determine plasma cell recovery and post-sort purity determined by means of a slide-based immunofluorescent assay. RNA recovery and integrity was assessed using the Agilent Bioanalyzer. Lastly, gene expression profiles were compared to determine the signature emanating from the shipment of samples. Despite minor differences, our results suggest that shipment of samples did not significantly affect these quality determinants in aggregate. (Cancer Epidemiol Biomarkers Prev 2008;17(3):666–73)
Myeloma in patients younger than age 50 years presents with more favorable features and shows better survival: an analysis of 10 549 patients from the International Myeloma Working Group
Durie, Brian G.M. , Turesson, Ingemar , Kyle, Robert A. , Bladé, Joan , Fonseca, Rafaël , Dimopoulos, Meletios Α. , Shimizu, Kazuyuki , Miguel, Jesús F. San , Westin, Jan, Harousseau, Jean‐Luc, Beksaç, Meral , Boccadoro, Mario , Palumbo, Antonio , Barlogie, Bart , Shustik, Chaim, Cavo, Michèle , Greipp, Philip R., Joshua, Douglas, Sonneveld, Pieter , Crowley, John, Beksaç, Meral , Ludwig, Heinz , Bolejack, Vanessa , Attal, Michel , Dimopoulos, Meletios A , San-Miguel, Jesus , Beksac, Meral , Fonseca, Rafael

Blood | February 12, 2008 | Volume: 111 | Issue: 8 | Pages: 4039-4047

10.1182/blood-2007-03-081018 Get It

AbstractWe analyzed the presenting features and survival in 1689 patients with multiple myeloma aged younger than 50 years compared with 8860 patients 50 years of age and older. Of the total 10 549 patients, 7765 received conventional therapy and 2784 received high-dose therapy. Young patients were more frequently male, had more favorable features such as low International Staging System (ISS) and Durie-Salmon stage as well as less frequently adverse prognostic factors including high C-reactive protein (CRP), low hemoglobin, increased serum creatinine, and poor performance status. Survival was significantly longer in young patients (median, 5.2 years vs 3.7 years; P < .001) both after conventional (median, 4.5 years vs 3.3 years; P < .001) or high-dose therapy (median, 7.5 years vs 5.7 years; P = .04). The 10-year survival rate was 19% after conventional therapy and 43% after high-dose therapy in young patients, and 8% and 29%, respectively, in older patients. Multivariate analysis revealed age as an independent risk factor during conventional therapy, but not after autologous transplantation. A total of 5 of the 10 independent risk factors identified for conventional therapy were also relevant for autologous transplantation. After adjusting for normal mortality, lower ISS stage and other favorable prognostic features seem to account for the significantly longer survival of young patients with multiple myeloma with age remaining a risk factor during conventional therapy.
The centrosome index is a powerful prognostic marker in myeloma and identifies a cohort of patients that might benefit from aurora kinase inhibition
Braggio, Esteban , Bryant, Barbara M. , Remstein, Ellen D., Valdez, Riccardo, Fonseca, Rafaël , McPhail, Ellen D. , Chng, Wee Joo , Mulligan, George , Doǧan, Ahmet , McPhail, Ellen Darcy , Braggio, Esteban , Fonseca, Rafael

Blood | November 16, 2007 | Volume: 111 | Issue: 3 | Pages: 1603-1609

10.1182/blood-2007-06-097774 Get It

AbstractCentrosome amplification is common in myeloma and may be involved in disease pathogenesis. We have previously derived a gene expression–based centrosome index (CI) that correlated with centrosome amplification and was an independent prognostic factor in a small cohort of heterogeneously treated patients. In this study, we validated the prognostic significance of the CI in 2 large cohorts of patients entered into clinical trials and showed that a high CI is a powerful independent prognostic factor in both newly diagnosed and relapsed patients, whether treated by intensive therapy (total therapy II) or novel agents (bortezomib). Tumors with high CI overexpressed genes coding for proteins involved in cell cycle, proliferation, DNA damage, and G2-M checkpoints, and associated with the centrosome and kinetochore/ microtubules. In particular, aurora kinases are significantly overexpressed in patients with high CI, with concordant increase in protein expression. Human myeloma cell lines with higher CI are more responsive to treatment with a novel aurora kinase inhibitor. Aurora kinase may represent novel therapeutic targets in these patients with very poor prognosis.
Immunoglobulin free light chain ratio is an independent risk factor for progression of smoldering (asymptomatic) multiple myeloma
Dispenzieri, Angela , Kyle, Robert A. , Katzmann, Jerry A., Therneau, Terry M. , Benson, Joanne, Clark, Raynell, Melton, L. Joseph, Kumar, Shaji , Fonseca, Rafaël , Jelinek, Diane F., Rajkumar, S. Vincent , Larson, Dirk R. , Benson, Joanne T., Gertz, Morie A. , Rajkumar, S Vincent , Dispenzieri, Angela , Fonseca, Rafael

Blood | October 17, 2007 | Volume: 111 | Issue: 2 | Pages: 785-789

10.1182/blood-2007-08-108357 Get It

We hypothesized that increased monoclonal free kappa or lambda immunoglobulin light chains in smoldering multiple myeloma (SMM), as detected by the serum free light chain (FLC) assay, indicates an increased risk of progression to active myeloma. Baseline serum samples obtained within 30 days of diagnosis were available in 273 patients with SMM seen from 1970 to 1995. At a median follow-up of surviving patients of 12.4 years, transformation to active disease has occurred in 59%. The best breakpoint for predicting risk of progression was an FLC ratio of 0.125 or less, or 8 or more (hazard ratio, 2.3; 95% CI, 1.6-3.2). The extent of abnormality of FLC ratio was independent of SMM risk categories defined by number of bone marrow plasma cells (BMPCs) and size of serum M proteins (BMPC ≥ 10% and serum M protein ≥ 3 g/dL; BMPC ≥ 10% but serum M protein < 3 g/dL; and serum M protein≥ 3 g/dL but BMPC < 10%). Incorporating the FLC ratio into the risk model, the 5-year progression rates in high-, intermediate-, and low-risk groups were 76%, 51%, and 25%, respectively. The serum immunoglobulin FLC ratio is an important additional determinant of clinical outcome in patients with SMM.
Proteomic Analysis of Waldenstrom Macroglobulinemia
Hatjiharissi, Evdoxia , Ngo, Hai T., Leontovich, Alexey A. , Leleu, Xavier , Timm, Michael, Melhem, Mona F., George, Diane, Lu, Ganwei, Alsayed, Yazan, Zeismer, Steven C., Cabanela, Miguel E., Nehme, Alex, Jia, Xiaoying , Moreau, Anne Sophie, Fonseca, Rafaël , Ghobrial, Joanna M. , Moreau, Anne Sophie, Treon, Steven P. , Gertz, Morie A. , Anderson, Kenneth C. , Witzig, Thomas E. , Ghobrial, Irene M. , Fonseca, Rafael

Cancer Research | April 17, 2007 | Volume: 67 | Issue: 8 | Pages: 3777-3784

10.1158/0008-5472.can-06-3089 Get It

Abstract To better understand the molecular changes that occur in Waldenstrom macroglobulinemia (WM), we employed antibody-based protein microarrays to compare patterns of protein expression between untreated WM and normal bone marrow controls. Protein expression was defined as a &gt;2-fold or 1.3-fold change in at least 67% of the tumor samples. Proteins up-regulated by &gt;2-fold included Ras family proteins, such as Rab-4 and p62DOK, and Rho family proteins, such as CDC42GAP and ROKα. Other proteins up-regulated by &gt;1.3-fold included cyclin-dependent kinases, apoptosis regulators, and histone deacetylases (HDAC). We then compared the samples of patients with symptomatic and asymptomatic WM and showed similar protein expression signatures, indicating that the dysregulation of signaling pathways occurs early in the disease course. Three proteins were different by &gt;2-fold in symptomatic versus asymptomatic, including the heat shock protein HSP90. Elevated protein expression was confirmed by immunohistochemistry and immunoblotting. Functional significance was validated by the induction of apoptosis and inhibition of proliferation using specific HDAC and HSP90 inhibitors. This study, therefore, identifies, for the first time, multiple novel proteins that are dysregulated in WM, which both enhance our understanding of disease pathogenesis and represent targets of novel therapeutics. [Cancer Res 2007;67(8):3777–8]
Multiple myeloma and FISH (but no CHIPS)
Fonseca, Rafaël , Fonseca, Rafael

Blood | April 4, 2007 | Volume: 109 | Issue: 8 | Pages: 3132-3133

10.1182/blood-2007-01-069419 Get It

Molecular Dissection of Hyperdiploid Multiple Myeloma by Gene Expression Profiling
Kumar, Shaji , VanWier, Scott, Ahmann, Greg, Price-Troska, Tammy, Henderson, Kim, Chung, Tae‐Hoon , Kim, Seungchan , Bryant, Barbara M. , Carpten, John D. , Rajkumar, S. Vincent , Lacy, Martha Q. , Dispenzieri, Angela , Kyle, Robert A. , Greipp, Philip R., Bergsagel, P. Leif , Fonseca, Rafaël , Bergsagel, P. Leif , Chng, Wee Joo , Henderson, Kimberly J., Mulligan, George , Gertz, Morie A. , Rajkumar, S Vincent , Dispenzieri, Angela , Chung, Tae-Hoon , Fonseca, Rafael

Cancer Research | April 4, 2007 | Volume: 67 | Issue: 7 | Pages: 2982-2989

10.1158/0008-5472.can-06-4046 Get It

Abstract Hyperdiploid multiple myeloma (H-MM) is the most common form of myeloma. In this gene expression profiling study, we show that H-MM is defined by a protein biosynthesis signature that is primarily driven by a gene dosage mechanism as a result of trisomic chromosomes. Within H-MM, four independently validated patient clusters overexpressing nonoverlapping sets of genes that form cognate pathways/networks that have potential biological importance in multiple myeloma were identified. One prominent cluster, cluster 1, is characterized by high expression of cancer testis antigen and proliferation-associated genes. Tumors from these patients were more proliferative than tumors in other clusters (median plasma cell labeling index, 3.8; P &lt; 0.05). Another cluster, cluster 3, is characterized by genes involved in tumor necrosis factor/nuclear factor-κB signaling and antiapoptosis. These patients have better response to bortezomib as compared with patients within other clusters (70% versus 29%; P = 0.02). Furthermore, for a group of patients generally thought to have better prognosis, a cluster of patients with short survival (cluster 1; median survival, 27 months) could be identified. This analysis illustrates the heterogeneity within H-MM and the importance of defining specific cytogenetic prognostic factors. Furthermore, the signatures that defined these clusters may provide a basis for tailoring treatment to individual patients. [Cancer Res 2007;67(7):2982–9]
Targeted therapeutics for multiple myeloma: The arrival of a risk-stratified approach
Fonseca, Rafaël , Stewart, A. Keith , Fonseca, Rafael

Molecular Cancer Therapeutics | March 15, 2007 | Volume: 6 | Issue: 3 | Pages: 802-810

10.1158/1535-7163.mct-06-0620 Get It

AbstractMultiple myeloma (MM) remains an incurable hematologic malignancy characterized by frequent early responses, inevitably followed by treatment relapse. Until recently, few effective therapies existed. Indeed, the use of alkylating agents and corticosteroids had remained the treatment of choice for almost four decades. Several novel agents for MM have now become available, including the immunomodulatory drugs thalidomide and lenalidomide, as well as the proteasome inhibitor bortezomib. Each of these agents is undergoing extensive clinical evaluation in combination with other therapies to produce unprecedented response rates in newly diagnosed and relapsed MM. Nevertheless, relapse remains universal and further therapeutics with broad activity are required. Importantly, it has become clear that pivotal genetic events are the primary harbingers of clinical outcome and novel targeted therapy approaches using existing approved drugs or novel agents, which address that disrupted signaling pathways are now in various stages of clinical testing. It seems increasingly likely that novel drug combinations, which together turn off these critical Achilles heels, will become the standard of care and that treatment will become increasingly personalized and guided by genetic testing and prognostic factors. [Mol Cancer Ther 2007;6(3):802–10]