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7 citation(s) found for "Xiao, Yao".

A Second Report of a Missense Variant in AMMECR1 Causing Midface Hypoplasia, Hearing Impairment, Elliptocytosis, and Nephrocalcinosis: Case Report and Lit
Tan, Jia W., Wilke, Matheus Vernet Machado Bressan , Panwar, Deepak , Kahn, Eva S., Figueiral, Marta , Xiao, Yao , Sas, David J. , Lanpher, Brendan C. , Vairo, Filippo Pinto e, Klee, Eric W. , Pinto E Vairo, Filippo, Wilke, Matheus V M B , Panwar, Deepak , Dikilitas, Ozan

Clinical Genetics | July 2, 2026 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.1111/cge.70209 | PMID 42386221 Get It

ABSTRACT Pathogenic variants in AMMECR1 have been associated with a rare multisystem disorder characterized by midface hypoplasia, hearing impairment, elliptocytosis, and nephrocalcinosis (MFHIEN). To date, most reported cases involve copy number variants or presumed loss‐of‐function alterations, with only a single prior report describing a missense variant supported by functional studies. Here, we report a patient with a heterozygous de novo AMMECR1 missense variant, NM_015365.3:c.649G>A p.(Val217Met) presenting with clinical features consistent with MFHIEN, including midface hypoplasia, partial hearing impairment, nephrocalcinosis, and elliptocytosis identified on peripheral blood smear. Comparative review of the literature highlights that while previously reported missense variants in AMMECR1 demonstrated altered intranuclear protein distribution and reduced expression in functional assays, clinical evidence supporting pathogenicity of non‐truncating variants remains limited. The phenotypic overlap between our patient and prior report strengthens the association between missense variations and the MFHIEN phenotype. Our findings support the pathogenic relevance of missense variation in AMMECR1 and emphasize the importance of integrating detailed phenotyping, including hematologic evaluation, with genomic data in the diagnosis of rare multisystem disorders. Additional cases and functional studies are needed to clarify genotype–phenotype correlations and underlying disease mechanisms.
Monogenic and Polygenic Contributions to Cardiomyopathy and Heart Failure Across Diverse Populations
Pereira, Naveen, Tan, Jia W. , Dikilitas, Ozan , Figueiral, Marta , Tan-Arroyo, Jennifer , Olson, Rory, Srinivas, Akshatha, (227567), Yao Xiao, Venettozzi, Marcella, Vairo, Filippo Pinto e, Schaid, DJ, Klee, Eric W., Dikilitas, Ozan , Olson, Rory J. , Panwar, Deepak, Cao, Jenny , Srinivas, Akshatha, Klee, Eric W.

No container title available | May 8, 2026 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.21203/rs.3.rs-9581360/v1 Get It

Abstract Pathogenic variants in cardiomyopathy genes confer substantial disease risk, yet clinical penetrance varies widely. The population-level prevalence, age-specific penetrance, and the extent to which polygenic susceptibility modifies disease risk across diverse ancestries remain poorly defined. This population-based cohort study leveraged genome sequencing and linked electronic health record data from the All of Us Research Program (n=414,830). This study found that P/LP variants in cardiomyopathy-associated genes were present in 0.91% of participants (95% CI, 0.88%–0.94%), with similar prevalence across ancestry groups. Compared with non-carriers, variant carriers had significantly higher odds of all-cause heart failure (ACHF, OR, 2.58; 95% CI, 2.31–2.89), non-ischemic heart failure (NIHF, OR, 2.74; 95% CI, 2.42–3.10), and non-ischemic cardiomyopathy (NICM, OR, 4.99; 95% CI, 4.44–5.63). Among carriers, by age 50 years, 24.5% (95% CI, 14.5%–33.4%) developed ACHF, 17.2% (95% CI, 8.8%–24.8%) developed NIHF, and 30.1% (95% CI, 19.5%–40.2%) developed NICM. Higher polygenic risk for heart failure was independently associated with increased risk of ACHF (OR, 1.81; 95% CI, 1.74–1.89), NIHF (OR, 1.66; 95% CI, 1.58–1.75), and NICM (OR, 1.69; 95% CI, 1.59–1.80). Among carriers with elevated polygenic risk, odds of disease were substantially higher than among non-carriers at average polygenic risk (ACHF: OR, 4.71; 95% CI, 4.17–5.32; NIHF: OR, 4.56; 95% CI, 3.99–5.22; NICM: OR, 8.51; 95% CI, 7.44–9.73). Results showed that P/LP variants in cardiomyopathy genes were relatively common in this large, ancestrally diverse cohort, and conferred increased risk of cardiomyopathy and HF, with incomplete but clinically meaningful penetrance. Polygenic risk for HF independently and additively increased disease risk across ancestries. Integrating both may improve risk stratification and enable more precise, equitable care.
Challenges and Opportunities in Cytopathology Artificial Intelligence
VandeHaar, Meredith A. , Alasi, Hussien , Doganay, Fatih, Alazab, Heba, Xiao, Yao , Balan, Jagadheshwar , Dangott, Bryan, Nassar, Aziza , Akkus, Zeynettin , Al-Asi, Hussien , Yilmaz, Ibrahim, Balan, Jagadheshwar , Dangott, Bryan J, Nassar, Aziza , Akkus, Zeynettin , Yilmaz, Ibrahim, Reynolds, Jordan

Bioengineering | February 13, 2025 | Volume: 12 | Issue: 2 | Pages: 176

10.3390/bioengineering12020176 | PMID 40001695 Get It

Artificial Intelligence (AI) has the potential to revolutionize cytopathology by enhancing diagnostic accuracy, efficiency, and accessibility. However, the implementation of AI in this field presents significant challenges and opportunities. This review paper explores the current landscape of AI applications in cytopathology, highlighting the critical challenges, including data quality and availability, algorithm development, integration and standardization, and clinical validation. We discuss challenges such as the limitation of only one optical section and z-stack scanning, the complexities associated with acquiring high-quality labeled data, the intricacies of developing robust and generalizable AI models, and the difficulties in integrating AI tools into existing laboratory workflows. The review also identifies substantial opportunities that AI brings to cytopathology. These include the potential for improved diagnostic accuracy through enhanced detection capabilities and consistent, reproducible results, which can reduce observer variability. AI-driven automation of routine tasks can significantly increase efficiency, allowing cytopathologists to focus on more complex analyses. Furthermore, AI can serve as a valuable educational tool, augmenting the training of cytopathologists and facilitating global health initiatives by making high-quality diagnostics accessible in resource-limited settings. The review underscores the importance of addressing these challenges to harness the full potential of AI in cytopathology, ultimately improving patient care and outcomes.
Survival benefit associated with liver transplantation for hepatocellular carcinoma based on tumor burden scores at listing
Liu, Hao , Lee, Hang , Shi, Liuhua , Wang, Xixi , Powers, Colin , Li, Xingjie , Alberola, Ramon Bataller, Behari, Jaideep , Duarte‐Rojo, Andrés , Hughes, Dempsey L. , Malik, Shahid M. , Jonassaint, Naudia , Tohme, Samer , Gunabushanam, Vikraman , Tevar, Amit D. , Cruz, Ruy J. , Dharmayan, Stalin, Ayloo, Subhashini, Humar, Abhinav , Liu, Hao , Duarte-Rojo, Andres , Zhang, Wei , Di, Mengyang , Wang, Xixi, Zhang, Xingyu , Sethi, Vrishketan , Xiao, Yao , Crane, Andrew, Kaltenmeier, Christof , Geller, David A. , Hughes, Christopher L. , Molinari, Michele

Hepatology Communications | January 7, 2025 | Volume: 9 | Issue: 1 | Pages: No page available

10.1097/hc9.0000000000000619 | PMID 39774957 Get It

Introduction: Liver transplantation (LT) provides significant survival benefits to patients with unresectable HCC. In the United States, organ allocation policies for HCCs within the United Network for Organ Sharing criteria do not prioritize patients based on their differences in oncological characteristics. This study assessed whether transplant-associated survival benefits (TASBs) vary among patients with different tumor burden scores (TBS) measured at the time of listing. Methods: We analyzed data from adults applying for HCC MELD exception points between 2002 and 2019, with follow-up until December 2023, using the Scientific Registry of Transplant Recipients. TBS was determined based on the largest tumor diameter and number of HCCs. Patients were categorized into low (≤3), intermediate (3.1–5), and high (>5) TBS groups. TASB was measured as the difference in 5-year survival with and without LT. Results: This study included 36,634 LT candidates. High-TBS patients had higher waitlist dropout rates and marginally lower post-transplant survival, resulting in a significantly greater TASB. The 5-year TASB for the low, intermediate, and high TBS groups were 15.7, 22.1, and 25.0 months, respectively. The adjusted survival benefit expressed in 5-year survival differences was 21.9%, 34.5%, and 39.4% in the low, intermediate, and high TBS groups, respectively ( p <0.001). Conclusions: Higher TBS during listing correlates with greater LT benefits for patients with unresectable HCC within UNOS criteria. We conclude that organ allocation policies in the United States should prioritize patients with high TBS due to their increased risk of dropout and comparable post-transplant survival when compared to patients with less advanced tumors.
Corrigendum: Liver Transplantation for Hepatocellular Carcinoma: A Narrative Review and A Glimpse into The Future
Liu, Hao, Li, Xingjie , Humar, Abhinav, Sethi, Vrishketan , Xiao, Yao

Seminars in Liver Disease | June 5, 2024 | Volume: 44 | Issue: 01 | Pages: e1-e3

10.1055/s-0044-1787737 | PMID 38839056 Get It

Enhancing Patient Care in Rare Genetic Diseases: An HPO-based Phenotyping Pipeline
Xiao, Yao , Enayati, Moein , Schaeferle, Gavin M., Lanpher, Brendan C. , Klee, Eric W. , Ngufor, Che

2023 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) | January 18, 2024 | Volume: No volume available | Issue: No issue available | Pages: 2754-2760

10.1109/bibm58861.2023.10385978 Get It

Liver Transplantation for Hepatocellular Carcinoma: A Narrative Review and A Glimpse into The Future
Liu, Hao , Li, Xingjie , Xiao, Yao , Humar, Abhinav , Sethi, Vrishketan

Seminars in Liver Disease | January 12, 2024 | Volume: 44 | Issue: 01 | Pages: 079-098

10.1055/a-2242-7543 | PMID 38211621 Get It

Liver transplantation (LT) is a highly effective treatment for carefully selected patients with hepatocellular carcinoma (HCC). In this review, we explored the development of LT selection criteria and organ allocation policies, comparing original data to underscore their historical progression into the intricate task of quantitatively estimating pre- and post-LT survivals. We emphasized the role of biomarkers such as serum alpha-fetoprotein, Des-gamma-carboxy-prothrombin, circulating tumor cells, and circulating tumor DNA in predicting patient outcomes. Additionally, we examined the transplant-associated survival benefits and the difficulties in accurately calculating these benefits. We also reviewed recent advancements in targeted therapy and checkpoint inhibitors for advanced, inoperable HCC and projected their integration into LT for HCC. We further discussed the growing use of living donor liver transplants in the United States and compared its outcomes with those of deceased donor liver transplants. Furthermore, we examined the progress in machine perfusion techniques, which have shown potential in improving patient outcomes and enlarging the donor pool. These advancements present opportunities to enhance LT patient survivals, refine selection criteria, establish new priority metrics, develop innovative bridging and downstaging strategies, and formulate redesigned LT strategies for HCC treatments.