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758 citation(s) found for "Lake, DF".

Parametrial Anisakidosis
Ramanan, Poornima , Blumberg, Andrea K., Mathison, Blaine A. , Pritt, Bobbi S. , Pritt, Bobbi S , Mathison, Blaine A

Journal of Clinical Microbiology | July 18, 2013 | Volume: 51 | Issue: 10 | Pages: 3430-3434

10.1128/jcm.01398-13 | PMID 23863565 Get It

ABSTRACT Anisakidosis is a parasitic infection caused by anisakid nematodes in the genera Anisakis and Pseudoterranova . Infection is not uncommon in the United States due to increased raw seafood consumption. We report the first known case of parametrial anisakidosis in a 42-year-old woman and review existing literature.
Ectopic fat and adipokines in metabolically benign overweight/obese women: The kronos early estrogen prevention study
Ogorodnikova, Alexandra D., McGinn, Aileen P., Zeb, Irfan , Budoff, Matthew J. , Harman, S. Mitchell , Miller, Virginia M. , Hodis, Howard N., Merriam, George R., Cedars, Marcelle I. , Taylor, Hugh S. , Løbo, Rogerio A. , Wildman, Rachel P., Khan, Unab Inayat , Brinton, Eliot A. , Manson, JoAnn E. , Naftolin, Frederick , Santoro, Nanette F. , Budoff, Matthew

Obesity | May 13, 2013 | Volume: 21 | Issue: 8 | Pages: 1726-1733

10.1002/oby.20200 | PMID 23670850 Get It

ObjectiveIt is unclear why despite a comparable cardiometabolic risk profile, “metabolically benign” overweight/obese individuals show an elevated risk of cardiovascular disease compared to normal weight individuals.Design and MethodsIn cross‐sectional analyses, we compared levels of ectopic fat (epicardial, pericardial, and hepatic fat) and adipokines (leptin, soluble leptin receptor, and high molecular weight [HMW] adiponectin) among metabolically benign (MBO) and at‐risk overweight/obese (ARO), and metabolically benign normal weight (MBNW) women, screened for the Kronos Early Estrogen Prevention Study. We defined “metabolically benign” with ≤ 1, and “at‐risk” with ≥2 components of the metabolic syndrome.ResultsCompared to MBO women, ARO women had significantly elevated odds of being in the top tertile of epicardial fat (OR: 1.76, 95% CI: 1.04‐2.99), hepatic fat (OR: 1.90, 95% CI:1.12‐3.24) and leptin (OR: 2.15, 95% CI: 1.23‐3.76), and the bottom tertile of HMW‐adiponectin (OR: 2.90, 95% CI: 1.62‐5.19). Compared to MBNW women, MBO women had significantly higher odds of being in the top tertile of epicardial fat (OR: 5.17, 95% CI: 3.22‐8.29), pericardial fat (OR: 9.27, 95% CI: 5.52‐15.56) and hepatic fat (OR: 2.72, 95% CI: 1.77‐4.19) and the bottom tertile of HMW adiponectin levels (OR: 2.51, 95% CI: 1.60‐3.94).ConclusionsLevels of ectopic fat and the adverse adipokine profile increase on a continuum of BMI, suggesting that the metabolically benign phenotype may be a transient state.
Three-dimensional nonlinear inverse scattering: Quantitative transmission algorithms, refraction corrected reflection, scanner design, and clinical results
Wiskin, James , Borup, D.T., André, Michael P. , Greenleaf, James F. , Parisky, Yuri R., Klock, John , Johnson, Steven G.

The Journal of the Acoustical Society of America | May 7, 2013 | Volume: 133 | Issue: 5_Supplement | Pages: 3229-3229

10.1121/1.4805138 Get It

Research in quantitative whole breast ultrasound imaging has been developing rapidly. Recently, we published results from 2D transmission inverse scattering algorithms, based on optimization, incorporating diffraction, refraction, and limited multiple scattering effects, using data collected from an early prototype, which showed the feasibility of high resolution quantitative imaging of the breast tissue speed and attenuation, and concomitant refraction corrected reflection imaging. However, artifact problems in speed and attenuation result from the 2D algorithms and the data characteristics. The reflection algorithm uses the speed map to model refractive effects of rays, so these artifacts are unacceptable. The 3D inverse scattering algorithm presented here, using data from a new prototype, overcomes most of these artifacts. We then use a 3D refraction corrected 360° compounded reflection algorithm for high resolution speckle free reflection images. We discuss the transmission and reflection algorithms and the advanced scanner used to collect the data, as well as initial clinical results from the Mayo Clinic, Breast Cancer Imaging Center, Orange County, and the University California, San Diego. We show examples of cysts, fibroadenomas, calcifications, cancers, and DCIS, in dense, fatty, and average breast tissue, and compare these with hand-held ultrasound, MRI, and mammography, where available.
Survival and Functional Independence after Implantation of a Permanent Pacemaker in Octogenarians and Nonagenarians: A Population-Based Study
Shen, Win K., Hayes, David L. , Hammill, Stephen C., Bailey, Kent R. , Ballard, David , Gersh, Bernard J.

Annals of Internal Medicine | April 12, 2013 | Volume: 125 | Issue: 6 | Pages: 476-480

10.7326/0003-4819-125-6-199609150-00008 | PMID 8779460 Get It

Characterization of the Pneumocystis carinii Histone Acetyltransferase Chaperone Proteins PcAsf1 and PcVps75
Pupaibool, Jakrapun , Bouchonville, Kelly J. , Kottom, Theodore J. , Limper, Andrew H. , Pupaibool, Jakrapun

Infection and Immunity | April 9, 2013 | Volume: 81 | Issue: 6 | Pages: 2268-2275

10.1128/iai.01173-12 | PMID 23569117 Get It

ABSTRACT Rtt109 is a lysine acetyltransferase that acetylates histone H3 at lysine 56 (H3K56) in fungi. This acetylation event is important for proper DNA replication and repair to occur. Efficient Rtt109 acetyltransferase activity also requires a histone chaperone, vacuolar protein sorting 75 (Vps75), as well as the major chaperone of the H3-H4 dimer, anti-silencing factor 1 (Asf1). Little is known about the role of these proteins in the opportunistic fungal pathogen Pneumocystis carinii . To investigate the functions of Asf1 and Vps75 in Pneumocystis carinii , we cloned and characterized both of these genes. Here, we demonstrate that both genes, P. carinii asf1 ( Pcasf1 ) and Pcvps75 , function in a fashion analogous to their Saccharomyces cerevisiae counterparts. We demonstrate that both P. carinii Asf1 (PcAsf1) and PcVps75 can bind histones. Furthermore, when Pcasf1 is expressed heterologously in S. cerevisiae asf1 Δ cells, PcAsf1 can restore full H3 lysine acetylation. We further demonstrated that the Pcasf1 cDNA expressed in asf1 Δ S. cerevisiae cells can restore growth to wild-type levels in the presence of genotoxic agents that block DNA replication. Lastly, we observed that purified PcAsf1 and PcVps75 proteins enhance the ability of PcRtt109 to acetylate histone H3-H4 tetramers. Together, our results indicate that the functions of the Rtt109-Asf1-Vps75 complex in the acetylation of histone H3 lysine 56 and in DNA damage response are present in P. carinii DNA and cell cycle progression.
International Working Group-Myeloproliferative Neoplasms Research and Treatment (IWG-MRT) & European Competence Network on Mastocytosis (ECNM) consensus response criteria in advanced systemic mastocytosis
Pardanani, Animesh , Akin, Cem , Reiter, Andreas , George, Tracy I. , Hermine, Olivier , Kluin‐Nelemans, Hanneke C. , Hartmann, Karin , Sperr, Wolfgang R. , Schwartz, Lawrence B. , Arock, Michel , Sotlar, Karl , Horny, Hans-Peter, Metcalfe, Dean D. , Escribano, Luís, Verstovšek, Srđan , Tefferi, Ayalew , Valent, Peter , Gotlib, Jason , Brockow, Knut , Órfão, Alberto , DeAngelo, Daniel J. , Verstovsek, Srdan , George, Tracy I , Sperr, Wolfgang , Valent, Peter , Hermine, Olivier , Akin, Cem , Arock, Michel , Kluin-Nelemans, Hanneke C

Blood | January 17, 2013 | Volume: 121 | Issue: 13 | Pages: 2393-2401

10.1182/blood-2012-09-458521 | PMID 23325841 Get It

Abstract Systemic mastocytosis (SM) is characterized by accumulation of neoplastic mast cells and is classified into indolent and aggressive forms. The latter include aggressive SM (ASM), mast cell leukemia (MCL), and SM associated with a myeloid neoplasm wherein 1 or both disease compartments exhibit advanced features. These variants, henceforth collectively referred to as advanced SM for the purposes of this report, are typically characterized by organ damage and shortened survival duration. In contrast to indolent SM, in which symptoms are usually managed by noncytotoxic antimediator therapy, cytoreduction is usually necessary for disease control in advanced SM. Unfortunately, current drug treatment of these patients rarely results in complete clinical and histopathologic remissions or improved survival time. Previously defined response criteria were adapted to the heterogeneous presentations of advanced SM and the limited effects of available drugs. However, recent advances in understanding the molecular pathogenesis of SM and the corresponding prospect in targeted therapy make it a priority to modify these criteria. Our current study is the product of an international group of experts and summarizes the challenges in accomplishing this task and forwards a new proposal for response criteria, which builds on prior proposals and should facilitate response evaluation in clinical trials.
Pavilion Lake Microbialites: Morphological, Molecular and Biochemical Evidence for a Cold-Water Transition to Colonial Aggregates
Schulze‐Makuch, Dirk , Lim, D. S. S. , Laval, B. , Turse, Carol, Walther-António, Marina , Chan, Olivia, Brady, Allyson L. , Reid, Donnie, Irwin, Louis N. , Pointing, Stephen Brian , Reid, Don, Walther-Antonio, Marina

Life | December 27, 2012 | Volume: 3 | Issue: 1 | Pages: 21-37

10.3390/life3010021 | PMID 25371330 Get It

The presence of microbialite structures in a freshwater, dimictic mid-latitudelake and their establishment after the last ice age about 10,000 years ago is puzzling.Freshwater calcite microbialites at Pavilion Lake, British Columbia, Canada, consist of acomplex community of microorganisms that collectively form large, ordered structuredaggregates. This distinctive assemblage of freshwater calcite microbialites was studied through standard microbial methods, morphological observations, phospholipid fatty acid(PLFA) analysis, DNA sequencing and the identification of quorum sensing molecules.Our results suggest that the microbialites may represent a transitional form from theexclusively prokaryotic colonial precursors of stromatolites to the multicellular organismicaggregates that give rise to coral reefs.
Biomarker-Based Targeting of the Androgen-Androgen Receptor Axis in Advanced Prostate Cancer
Kohli, Manish , Qin, Rui , Jiménez, Rafael E. , Dehm, Scott M. , Kohli, Manish , Dehm, Scott M

Advances in Urology | August 22, 2012 | Volume: 2012 | Issue: No issue available | Pages: 1-14

10.1155/2012/781459 | PMID 22956944 Get It

Recent therapeutic advances for managing advanced prostate cancer include the successful targeting of the androgen-AR axis with several new drugs in castrate resistant prostate cancer including abiraterone acetate and enzalutamide (MDV3100). This translational progress from “bench to bed-side” has resulted in an enlarging repertoire of novel and traditional drug choices now available for use in advanced prostate cancer therapeutics, which has had a positive clinical impact in prolonging longevity and quality of life of advanced prostate cancer patients. In order to further the clinical utility of these drugs, development of predictive biomarkers guiding individual therapeutic choices remains an ongoing challenge. This paper will summarize the potential in developing predictive biomarkers based on the pathophysiology of the androgen-AR axis in tumor tissue from patients with advanced prostate cancer as well as inherited variation in the patient’s genome. Specific examples of rational clinical trial designs incorporating potential predictive biomarkers from these pathways will illustrate several aspects of pharmacogenetic and pharmacogenomic predictive biomarker development in advanced prostate cancer therapeutics.
Abstract 5104: Identification of key tumorigenic pathways in pancreatic adenocarcinoma patients using massively parallel DNA and RNA sequencing
Craig, David W. , Carpten, John D. , Demeure, Michael J. , Kiefer, Jeffrey , Posner, Richard G. , Izatt, Tyler, Sinari, Shripad, Christoforides, Alexis, Aldrich, Jessica, Kurdoglu, Ahmet, Benson, Hollie, Baker, Angela , Han, Haiyong , Lake, Douglas F. , Ramanathan, Ramesh K., Stewart, A. Keith, Hoff, Daniel D. Von , Liang, Winnie S. , Borad, Mitesh J. , Weiss, Glen J. , Hostetter, Galen H. , Phillips, L Taylor , Stites, Edward C. , Fonseca, Rafaël

Cancer Research | August 9, 2012 | Volume: 72 | Issue: 8_Supplement | Pages: 5104-5104

10.1158/1538-7445.am2012-5104 Get It

Abstract Purpose: Pancreatic adenocarcinoma is among the most lethal forms of all malignancies. While significant research has implicated multiple genes in disease pathogenesis, identification of therapeutic leads has been difficult. The majority of currently available therapies provide only marginal benefit. To address this issue, our goal was to assess global somatic events across multiple pancreatic tumors by using next-generation sequencing technologies (NGS). Experimental Design: We performed whole genome sequencing (WGS) on paired tumor and normal samples from 3 pancreatic adenocarcinoma patients. Additionally, we performed whole transcriptome sequencing (WTS) on 2 of these patients’ tumors for which tumor RNA was available. Results: We generated on average 132 billion mappable bases across all patients using WGS, and identified 140 somatic coding events including point mutations, insertion/deletions, and chromosomal copy number variants. Data from WGS and WTS were integrated and analyzed to identify the most heavily affected pancreatic cancer pathways across all patients. The KRAS signaling pathway was identified as the most significant map. Unbiased global pathway analysis was also performed to identify processes that may be impacted. Consistent with the previous analysis, the most significant pathway from this analysis is also KRAS signaling. This integrated analysis specifically identifies heavily affected pathways in pancreatic cancer and pinpoints genes and processes that may be considered as targets for more effective therapies. Conclusions: While sequencing of additional patients is necessary to strengthen selection of key pathways, we demonstrate the utility of using NGS to understand the processes driving pancreatic adenocarcinoma so that standardized treatments for patients may be improved. Citation Format: {Authors}. {Abstract title} [abstract]. In: Proceedings of the 103rd Annual Meeting of the American Association for Cancer Research; 2012 Mar 31-Apr 4; Chicago, IL. Philadelphia (PA): AACR; Cancer Res 2012;72(8 Suppl):Abstract nr 5104. doi:1538-7445.AM2012-5104