Citations

Showing 10 of 107969 citations.

N-glycoproteomic and proteomic alterations in SRD5A3-deficient fibroblasts
Ranatunga, Wasantha , Budhraja, Rohit , Sabu, Saniha, Kantautas, Kristin A. , Preston, Graeme , Garapati, Kishore , Pandey, Akhilesh , Kantautas, Kristin A , Joshi, Neha , Perlstein, Ethan , Kozicz, Tamás , Morava, Éva , Pandey, Akhilesh

Mayo Clinic

Glycobiology | October 3, 2024 | Volume: 34 | Issue: 11 | Pages: No page available

10.1093/glycob/cwae076 | PMID 39360848 Get It

Abstract SRD5A3-CDG is a congenital disorder of glycosylation (CDG) resulting from pathogenic variants in SRD5A3 and follows an autosomal recessive inheritance pattern. The enzyme encoded by SRD5A3, polyprenal reductase, plays a crucial role in synthesizing lipid precursors essential for N-linked glycosylation. Despite insights from functional studies into its enzymatic function, there remains a gap in understanding global changes in patient cells. We sought to identify N-glycoproteomic and proteomic signatures specific to SRD5A3-CDG, potentially aiding in biomarker discovery and advancing our understanding of disease mechanisms. Using tandem mass tag (TMT)-based relative quantitation, we analyzed fibroblasts derived from five patients along with control fibroblasts. N-glycoproteomics analysis by liquid chromatography–tandem mass spectrometry (LC–MS/MS) identified 3,047 glycopeptides with 544 unique N-glycosylation sites from 276 glycoproteins. Of these, 418 glycopeptides showed statistically significant changes with 379 glycopeptides decreased (P < 0.05) in SRD5A3-CDG patient-derived samples. These included high mannose, complex and hybrid glycan-bearing glycopeptides. High mannose glycopeptides from protocadherin Fat 4 and integrin alpha-11 and complex glycopeptides from CD55 were among the most significantly decreased glycopeptides. Proteomics analysis led to the identification of 5,933 proteins, of which 873 proteins showed statistically significant changes. Decreased proteins included cell surface glycoproteins, various mitochondrial protein populations and proteins involved in the N-glycosylation pathway. Lysosomal proteins such as N-acetylglucosamine-6-sulfatase and procathepsin-L also showed reduced levels of phosphorylated mannose-containing glycopeptides. Our findings point to disruptions in glycosylation pathways as well as energy metabolism and lysosomal functions in SRD5A3-CDG, providing clues to improved understanding and management of patients with this disorder.
Plasma Ghrelin and Risks of Sex-Specific, Site-Specific, and Early-Onset Colorectal Cancer: A Mendelian Randomization Analysis
Hazelwood, Emma , Manzano, Catalina Lopez , Vincent, Emma E. , Albanes, Demetrius , Bishop, D. Timothy , Marchand, Loı̈c Le , Peters, Ulrike , Murphy, Gwen , Samadder, N. Jewel , Guelpen, Bethany Van , Papadimitriou, Nikos , Lopez Manzano, Catalina , Bishop, D Timothy , Marchand, Loïc Le , Ulrich, Cornelia M , Peters, Ulrike , Murphy, Gwen , Samadder, N Jewel , Anderson, Laura , Gunter, Marc J , Murphy, Neil , Van Guelpen, Bethany , Papadimitriou, Nikos , Vincent, Emma E , Albanes, Demetrius , Hazelwood, Emma , Ulrich, Cornelia M. , Anderson, Laura N. , Gunter, Marc J. , Murphy, Neil

Mayo Clinic

Cancer Epidemiology, Biomarkers & Prevention | October 3, 2024 | Volume: 33 | Issue: 12 | Pages: 1727-1732

10.1158/1055-9965.epi-24-0926 | PMID 39361354 Get It

Abstract Background: Epidemiological and laboratory-based studies have provided conflicting evidence for a role of ghrelin in colorectal cancer development. We conducted two-sample Mendelian randomization (MR) analyses to evaluate evidence for an association of circulating ghrelin and colorectal cancer risk overall and by sex, cancer subsite, and age at diagnosis. Methods: Genetic instruments proxying plasma total ghrelin levels were obtained from a recent genome-wide association study of 54,219 participants. Summary data for colorectal cancer risk were obtained from a recent meta-analysis of several genetic consortia (up to 73,673 cases and 86,854 controls). A two-sample MR approach and several sensitivity analyses were applied. Results: We found no evidence for an association of genetically predicted plasma total ghrelin levels and colorectal cancer risk (0.95, 95% confidence interval, 0.81–1.12; R2 of ghrelin genetic instruments: 4.6%), with similarly null results observed when stratified by sex, anatomical subsite, and for early-onset colorectal cancer. Conclusions: Our study suggests that plasma ghrelin levels are unlikely to have a causal relationship with overall, early-onset, and sex- and cancer subsite–stratified colorectal cancer risk. Impact: This large-scale analysis adds to the growing body of evidence that plasma total ghrelin levels are not associated with colorectal cancer risk.
Optimizing multiple Myeloma clinical trials: research direction, addressing limitations, and strategies for improvement
Ebraheem, MS, Gertz, Morie A. , Mian, Hira , Gertz, Morie A , Mian, Hira , Ebraheem, Mohammad S

Mayo Clinic

Leukemia & Lymphoma | October 3, 2024 | Volume: 66 | Issue: 1 | Pages: 16-25

10.1080/10428194.2024.2408646 | PMID 39360594 Get It

Six-year follow-up of a world record-breaking master marathon runner
Romberger, Nathan T. , Stock, Joseph M. , McMillan, Ronald , Overstreet, Matthew, Lepers, Romuald , Joyner, Michael J. , Farquhar, William B. , McMillan, Ronald K , Joyner, Michael J

Mayo Clinic

Journal of Applied Physiology | October 3, 2024 | Volume: 137 | Issue: 5 | Pages: 1354-1358

10.1152/japplphysiol.00474.2024 | PMID 39359184 Get It

We performed 6-yr follow-up testing on a world record-breaking master marathon runner. We determined that his performance declined since his record-breaking marathon in 2018 primarily due to a reduction in V̇o2max. His max heart rate (HR) changed minimally, but his peak O2 pulse decreased, suggesting that his maximal stroke volume and/or arteriovenous O2 difference decreased. These changes likely reflect primarily age-related effects in the absence of an overt pathological disease process.
Cardiology Consult for the General Pediatrician after Cardiac Manifestations from a SARS-CoV-2 Infection
Amdani, Shahnawaz , Altman, Carolyn A. , Chowdhury, Devyani , Soma, David , Archer, Jeremy M. , Tierney, Seda , Renno, Markus S., Nguyen, Quang‐Tuyen , Glickstein, Julie S. , Orr, William B. , Renno, Markus S. , Orr, William B , Ronai, Christina , Miller, Jacob A.

Mayo Clinic

Current Pediatric Reviews | October 3, 2024 | Volume: 22 | Issue: 1 | Pages: 11-19

10.2174/0115733963314978240923110844 | PMID 39360535 Get It

The novel Coronavirus Disease 2019 (COVID-19), caused by the SARS-CoV-2 virus, created a need for evidence-based guidelines for the evaluation, management, and follow-up after infection. Data have become rapidly available, creating a challenge for medical providers to stay abreast of the ever-evolving recommendations. This article, written collaboratively by pediatric cardiovascular experts, pediatricians, and sports medicine specialists, is focused on SARS-CoV- 2-related pediatric cardiac manifestations. It aims to provide a systematic review of high-yield literature related to all cardiovascular entities as a tool for primary pediatric clinicians to utilize as they consider the cardiac consequences of acute SARS-CoV-2 infection, MIS-C, vaccine-related myocarditis, return-to-play, and long COVID-19 syndrome.
Defining the Etiology of Renal Allograft Dysfunction Using Banff 2019 Classification: Correlation with Post-Transplant Duration and Creatinine Levels—A Comprehensive Analysis of 200 Renal Biopsies at a Tertiary Care Medical Center Hospital
Saleem, Rabia , Nasir, Humaira, Chakravarty, Tushar , Mansoor, Ibrahim, Alazawi, Sama, Ballouk, Casem, Abdulwaasey, Mohammad, Sangüeza, Omar P., Shaker, Nada , Shaker, Nada , Shaker, Nuha

Mayo Clinic

International Journal of Surgical Pathology | October 3, 2024 | Volume: 33 | Issue: 3 | Pages: 615-622

10.1177/10668969241283737 | PMID 39360394 Get It

Objective Chronic kidney disease is a growing global health issue, contributing significantly to morbidity and mortality. The incidence of end-stage renal disease (ESRD) is approximately 100 per million population. Renal transplantation remains the cornerstone treatment for ESRD, with a projected 20-year survival rate of 60%. We aim to define the etiology of renal allograft dysfunction using the Banff 2019 classification by analyzing 200 renal allograft biopsies in correlation with creatinine levels across post-transplant time frames. Methodology 200 renal allograft biopsies are analyzed using the recent Banff 2019 classification with creatinine levels and post-transplant duration correlation. Results The study included 150 (75%) male patients and 50 (25%) female patients, with the majority 78 (39%) representing the age group of 16-30 years. 36 (18%) biopsies were within 3-month post-transplant, while 92 (46%) were 2-year post-transplant. According to the Banff 2019 classification, 92 (46.0%) transplant rejection biopsies were identified, with most 54 (27%) exhibiting antibody-mediated rejection (Category 2), including 40 (20%) active acute antibody-mediated rejection (ABMR) and 14 (7.0%) chronic active ABMR. T-cell-mediated rejection (TCMR; Category 4) represented 12 (6%) biopsies, including 10 (5%) acute TCMR and 2 (1%) chronic active TCMR. Category 5, the miscellaneous group, represented 100 (50%) biopsies, out of which 32 (16%) exhibited calcineurin inhibitor (CNI) toxicity, 38 (19%) acute tubular necrosis, and 8 (4%) thrombotic microangiopathy. A notable variation in the dysfunction distribution across different post-transplant time frames indicated a temporal evolution in the underlying causes of allograft dysfunction. Specific Banff categories showed a robust association with renal dysfunction, potentially contributing to the elevation of creatinine levels and renal function deterioration. Conclusion Our study highlights the intricate pathophysiology of renal allograft dysfunction. Most biopsies were attributed to ABMR whereas one-third of biopsies exhibited mixed lesions (ABMR and TCMR or ABMR and calcineurin inhibitor toxicity (CNIT)). Additionally, this study suggests that renal allograft rejection remains a significant contributor to graft dysfunction. A complex interplay between histological findings, Banff classification, and renal function is noted. A significant difference in the distribution of dysfunction across post-transplant time frames is noted suggesting a temporal evolution in the etiology of allograft dysfunction. Certain Banff categories demonstrate a stronger association with renal dysfunction that may influence creatinine level increase and renal function deterioration. In correspondence to the recent Banff 2019 guidelines for diagnosing ABMR, we emphasize the role of C4d staining on immunofluorescence or immunohistochemistry in allograft biopsies as imperative for timely diagnosis and immunosuppressant therapy adjustment, ultimately enhancing graft survival. Further research is needed to elucidate the underlying mechanisms driving renal dysfunction in different Banff categories, ultimately informing personalized management strategies for patients with renal allograft dysfunction. In line with the Banff 2019 guidelines for diagnosing ABMR, this study highlights the critical role of C4d staining through immunofluorescence or immunohistochemistry in allograft biopsies for early diagnosis and timely adjustment of immunosuppressive therapy, ultimately improving graft survival.
Bronchial Sialadenoma Papilliferum in a 10-Year-Old Boy
Guo, Shunhua , Schmitt, Alessandra C. , Lewis, James S. , Rumilla, Ande M., Tazelaar, Henry D. , Schmitt, Alessandra Ceolin, Lewis, James S, Lo, Ying‐Chun , Tazelaar, Henry D.

Mayo Clinic

International Journal of Surgical Pathology | October 3, 2024 | Volume: 33 | Issue: 3 | Pages: 765-771

10.1177/10668969241283482 | PMID 39360355 Get It

Sialadenoma papilliferum (SP) is a rare salivary gland tumor mostly reported in the oral cavity. Here we describe a bronchial SP in the left upper lobe bronchus of a 10-year-old boy. At bronchoscopy, a well-circumscribed polypoid lesion protruding into the bronchial lumen was identified. The tumor was excised, but eventually, the patient had to undergo a sleeve resection after 2 recurrences. Pathology revealed a papillocystic lesion with exophytic and endophytic components. The cells lining the exophytic surface and papillary structures were columnar and squamous, and the cells lining endophytic cystic and papillary structures were cuboidal to columnar, all of which were diffusely reactive with antibodies to SOX10 protein. The presence of basal cells was demonstrated by p63 immunoreactivity. The cells failed to immunohistochemically express BRAF V600E. Fluorescence in situ hybridization analysis revealed no MAML2 or RET gene rearrangement. The patient is alive 24 years after resection with no additional recurrences. Bronchial SP needs to be recognized and distinguished from other benign and malignant salivary gland and pulmonary neoplasms so that patients can receive appropriate treatment and follow-up.
Psychometric Properties of the Serbian Version of the Arm, Shoulder, and Hand Disability Self-Assessment Questionnaire: Criterion Validity, Construct Validity, and Internal Consistency
Vucetic, Milos, Milutinović, Suzana , Stojičić, Milan , Aleksandric, Dejan , Mičeta, Lazar , Petrović, Bojan , Matejic, Aleksandar , Rajović, Nina , Stanisic, Vladislav, Tasic, Ana, Dubravac, Milena, Mašić, Srdjan , Milutinovic, Suzana , Stojicic, Milan , Aleksandric, Dejan , Miceta, Lazar , Matejic, Aleksandar , Rajovic, Nina , Masic, Srdjan , Pavlović, Vedrana , Milić, Nataša , Tasic, Ana, Stanisavljević, Dejana

Mayo Clinic

Journal of Clinical Medicine | October 3, 2024 | Volume: 13 | Issue: 19 | Pages: 5903

10.3390/jcm13195903 | PMID 39407963 Get It

Background/Objectives: The Disabilities of the Arm, Shoulder, and Hand (DASH) questionnaire is a widely employed self-report tool for assessing upper extremity function. The aim of this study was to assess the psychometric properties of the Serbian version of the DASH by determining its criterion and construct validity, as well as internal consistency. Methods: This cross-sectional study was conducted among patients with hand and wrist disabilities at the Institute for Orthopedics “Banjica”, Serbia. The psychometric properties of the Serbian version of the DASH were analyzed through an examination of its factorial structure and internal consistency. The DASH consists of 30 items, 24 of which assess function, 21 of which focus on physical function and three on social/role function. The remaining six items evaluate symptoms related to pain, tingling/numbness, weakness, and stiffness. Results: A total of 297 patients were included in the study. The mean age was 47.4 ± 16.8 years, with 50.5% males. Three models were assessed to determine the reliability and validity of the questionnaire across different domains. Model 1 examined a single-factor structure. In Model 2, the items were divided into two domains: Physical Function and Psychosocial/Symptoms. In Model 3, items were subdivided into three domains: Physical Function, Symptoms, and Psychosocial. All models demonstrated an excellent internal consistency with a Cronbach’s alpha > 0.9 for most domains. The values for the fit indices Tucker–Lewis index (TLI) and Comparative-Fit Index (CFI) were above their cut-off criteria of 0.9, while the Root Mean Square Error of Approximation (RMSEA) and Standardized Root Mean Square Residual (SRMR) were below the suggested value of 0.06, indicating an excellent level of models fit. Standardized factor loadings were statistically significant (p < 0.05). Conclusions: The present study provided the evidence for the appropriate metric properties of the Serbian version of the DASH. Results support both the unidimensional and multidimensional structures of the DASH.
Detection of Residual iPSCs Following Differentiation of iPSC-Derived Retinal Pigment Epithelial Cells
Hill, Matthew, Andrews‐Pfannkoch, Cynthia, Atherton, Evan, Knudsen, Travis, Trncic, Emma , Marmorstein, Alan D. , Marmorstein, Alan D

Mayo Clinic

Journal of Ocular Pharmacology and Therapeutics | October 3, 2024 | Volume: 40 | Issue: 10 | Pages: 680-687

10.1089/jop.2024.0130 | PMID 39358867 Get It

Purpose: The goal of this study was to develop a lot release assay for iPSC residuals following directed differentiation of iPSCs to retinal pigment epithelial (RPE) cells. Methods: RNA Sequencing (RNA Seq) of iPSCs and RPE derived from them was used to identify pluripotency markers downregulated in RPE cells. Quantitative real time PCR (qPCR) was then applied to assess iPSC residuals in iPSC-derived RPE. The limit of detection (LOD) of the assay was determined by performing spike-in assays with known quantities of iPSCs serially diluted into an RPE suspension. Results: ZSCAN10 and LIN28A were among 8 pluripotency markers identified by RNA Seq as downregulated in RPE. Based on copy number and expression of pseudogenes and lncRNAs ZSCAN10 and LIN28A were chosen for use in qPCR assays for residual iPSCs. Reverse transcription PCR indicated generally uniform expression of ZSCAN10 and LIN28A in 21 clones derived from 8 iPSC donors with no expression of either in RPE cells derived from 5 donor lines. Based on qPCR, ZSCAN10 , and LIN28A expression in iPSCs was generally uniform. The LOD for ZSCAN10 and LIN28A in qPCR assays was determined using spike in assays of RPE derived from 2 iPSC lines. Analysis of ΔΔC t found the limit of detection to be <0.01% of cells, equivalent to <1 iPSC/10,000 RPE cells in both iPSC lines. Conclusions: qPCR for ZSCAN10 and LIN28A detects <1 in 10,000 residual iPSCs in a population of iPSC-derived RPE providing an adequate LOD of iPSC residuals for lot release testing.