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36 citation(s) found for "Kaminski, N".

Long‐Term Cancer and Mortality After Thymectomy
Shelly, Shahar , Ani, Mor, Li, Yuebing , Kaminski, Henry J. , Wolfe, Gil I. , Miron, Keren, Ramon‐Gonen, Roni , Klein, Christopher J , Li, Yuebing , Kaminski, Henry , Wolfe, Gil I , Ramon-Gonen, Roni , Shahar, Shelly , Klein, Christopher J.

European Journal of Neurology | August 1, 2026 | Volume: 33 | Issue: 8 | Pages: No page available

10.1111/ene.70721 | PMID 42538851 Get It

ABSTRACT Background Long‐term health effects of thymectomy in adults remain uncertain. Previous reports suggested associations with increased mortality, cancer incidence, and autoimmune disease, although these findings may reflect differences in patient selection, surgical indication, or follow‐up duration. We aimed to examine long‐term outcomes following adult thymectomy. Methods We performed a propensity score‐matched retrospective study of patients who underwent thymectomy or comparator cardiothoracic procedures, with follow‐up extending to 10 years. Primary outcomes were all‐cause mortality, new‐onset malignancy, and autoimmune disease. Findings were compared with those reported in a recent study that has raised caution regarding thymic excision. Results We identified 425 patients who underwent thymectomy and 5401 controls who underwent coronary artery bypass or valve surgery. After matching, 398 patients remained in each group. Thymectomy was not associated with increased mortality at 5 years ( HR = 0.63; 95% CI , 0.38–1.04) or 10 years ( HR = 0.78; 95% CI , 0.54–1.13). Excluding reclassified thymic cancers, 5‐year extrathymic malignancy incidence was 2.3% versus 1.8% ( p = 0.54); no significant differences were observed in immune‐related disease. Mortality was higher among patients with thymic malignancy. Among MG patients, only one event occurred, precluding reliable estimation. Conclusions Thymectomy was not associated with excess mortality or malignancy at 10 years compared with matched cardiothoracic controls. Indication‐stratified analyses within the thymectomy cohort showed higher mortality for thymic malignancy, with insufficient events to assess outcomes in MG patients. These findings do not support a generalized survival penalty from thymectomy, though caution is warranted for incidental thymic removal.
Opportunities for Human Lung Tissue-Based Studies in Fibrotic ILD Research
Kim, John S, Podolanczuk, Anna, Limper, Andrew H. , Hariri, Lida P. , Richeldi, L., Rosas, Iván O. , Jenkins, G, Luo, Fengming, Roman, Jesse , Sime, Patricia J. , Kaminski, N, Martinez, Fernando J, Noth, Imre , Hariri, Lida P , Limper, Andrew H , Sturek, Jeffrey M , Podolanczuk, Anna J. , Hannan, Riley T. , Richeldi, Luca , Luo, Fengming , Tomassetti, Sara , Thannickal, Victor J. , Kropski, Jonathan A , Kaminski, Naftali

American Journal of Respiratory and Critical Care Medicine | June 30, 2026 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.1093/ajrccm/aamag346 | PMID 42384176 Get It

Combined TCR-seq and single-cell RNA-seq reveal distinct origins for antiviral immunity after post-transplant cyclophosphamide and tac/MTX gvhd prophylaxis: Results from the BMT CTN 1801 study
Schmalz, Joseph , Winn, Nicholas, Kaminski, James J. , Sanders, Catherine , Robins, Harlan , Zavistaski, Jillian, Schichter, Isabella, Steinberg, Lea, Applegate, Kristy, Bar, Merav , Clark, William, Jones, Richard J. , Logan, Brent R. , Martens, Michael, Riches, Marcie , Saber, Wael , Sandhu, Karamjeet , Elmariah, Hany , Runaas, Lyndsey, Rezvani, Andrew R. , Loren, Alison W. , Horowitz, Mary M. , Hamadani, Mehdi, Bolaños‐Meade, Javier , Bhatt, Ami S. , Kean, Leslie S. , Elmariah, Hany , Larkin, Karilyn , Bhatt, Ami S , Siegel, Steven J. , DeWolf, Susan , Kaminski, James, Bien, Stephanie A. , Chhabra, Saurabh , Choi, Sung Won , Das, Suman R. , Jenq, Robert R. , Levine, John E. , Murthy, Hemant S. , Rashidi, Armin , Sung, Anthony D. , Malki, Monzr M. Al , Gooptu, Mahasweta , Alousi, Amin Majid , Shaffer, Brian C. , Jurdi, Najla El , Hamadani, Mehdi , Holtan, Shernan G. , Perales, Miguel‐Angel

Blood | December 5, 2025 | Volume: 146 | Issue: Supplement 1 | Pages: 818-818

10.1182/blood-2025-818 Get It

Abstract Background: A randomized multicenter trial (BMT CTN 1703) demonstrated that after reduced intensity conditioning HCT, PT-Cy-based GVHD prophylaxis led to significant reductions in acute and chronic GVHD, but was associated with significantly more Grade 2 (moderate) infections and similar overall survival vs Tac/MTX. A linked mechanistic study (BMT CTN 1801) found that PT-Cy led to pan-T cell depletion and reduced T cell receptor (TCR) repertoire diversity vs Tac/MTX. To discover the molecular mechanisms driving the association of PT-Cy with increased infections, we examined pathogen-specific T cell reconstitution in BMT CTN 1801 patients (n=165 PT-Cy, n=159 Tac/MTX). Methods: We performed deep TCR sequencing on 2,369 blood samples collected pre-HCT (recipient baseline) and on Days +7, 14, 28, 63, 100, 180, 270, 365, 730, and from the graft infusion product. We then applied a novel set of TCR classifiers (Adaptive Biotechnologies) capable of identifying pathogen-specific clones associated with CMV, EBV, SARS-CoV-2, HSV-1, HSV-2, parvovirus, RSV, influenza A, rhinovirus, adenovirus, HHV-6B, norovirus and Toxoplasma. Single-cell (sc) TCR/RNA-sequencing on a sample subset (n=26) was performed to determine the phenotype of pathogen-specific T cells. Results. By linking scRNA-seq with pathogen-specific TCR barcoding, we identified CD4 and CD8 memory T cells as their predominant T cell reservoir. We found that the total number of pathogen-specific singleton TCRs was significantly lower with PT-Cy, starting early post-HCT and persisting through 2 years. For example, at Day +14, PT-Cy patients had 7.8-fold fewer pathogen-specific singleton TCRs vs Tac/MTX (mean of 6.9 vs 54.1, p<0.001). Consistent differences between PT-Cy and Tac/MTX were observed for TCRs specific for each pathogen individually. Patients who developed Grade 3 (severe) viral infections had significantly fewer pathogen-specific singleton TCRs at Day +14 compared to those who had no viral infections (mean of 4.0 vs 32.5, p=0.03). Leveraging intrinsic TCR barcoding of the HCT infusion (“graft”) and of the patient's baseline samples (“recipient”), we could assign the graft/recipient origin of the pathogen-specific cells with high fidelity. This analysis revealed pronounced differences in the origin of pathogen-specific T cells with PT-Cy vs Tac/MTX, especially prior to Day +100. The absolute number of pathogen-specific TCRs originating from the graft was significantly higher with Tac/MTX vs PT-Cy. This difference was observed from day +7 through 6 months post-HCT, with up to 7.1-fold more graft-derived pathogen-specific TCRs in Tac/MTX vs PT-Cy (p<0.001 at each timepoint before day +100). Within patients who received Tac/MTX, the balance of graft vs recipient pathogen-specific clones significantly favored graft clones (for example, a mean of 14.9 graft vs 8.6 recipient pathogen-specific TCRs at Day+14, p=0.02). By contrast, with PT-Cy, in addition to having substantially fewer pathogen-specific TCRs overall, the proportion of these TCRs was not significantly different between graft and recipient clones (mean of 2.1 graft vs 3.3 recipient pathogen-specific TCRs at Day+14, p=0.42). These data uncover that, in addition to the reduction in pathogen-specific T cells with PT-Cy, there was a relative skewing of the anti-microbial T cell reservoir towards recipient cells that persisted after conditioning. Conclusions: PT-Cy led to in vivo T cell depletion across all T cell subsets, which prominently included clones tracked from the allograft itself into the HCT recipient, with a relative sparing of recipient T cell clones that survived transplant conditioning. While the mechanism for relative sparing of recipient cells has not yet been determined, these conditioning-exposed cells may be less proliferative than newly infused graft T cells. The depletion of graft T cells included CD4 and CD8 memory cells specific for infections, which may have contributed to relative deficits in protective immunity against infection in patients receiving PT-Cy. Importantly, these data suggest that with PT-Cy, persisting recipient TCRs may play a key role in preserving anti-infectious immunity. Taken together, these results provide a mechanistic basis for key post-transplant clinical outcomes of the landmark BMT CTN 1703 study. They also underscore the importance of recipient immune status with PT-Cy, creating the opportunity for targeted infection risk assessment in these patients.
Matrix metalloproteinases and disease severity among PI*MZ and PI*ZZ individuals in the Genomic Research in Alpha-1 Antitrypsin Deficiency and Sarcoidosis (GRADS) cohort
Tejwani, Vickram , Pratte, Katherine , Ortega, Victor E. , Kaminski, Naftali , Kaminski, Naftali , Bowler, Russell P. , Serban, Karina A. , Stoller, James K. , Strange, Charlie

BMJ Open Respiratory Research | November 18, 2025 | Volume: 12 | Issue: 1 | Pages: e003585

10.1136/bmjresp-2025-003585 | PMID 41253406 Get It

Introduction There is an increased risk of chronic obstructive pulmonary disease (COPD) in heterozygotes for the alpha-1 antitrypsin (AAT) Z allele (PI*MZ), but there is significant variation in outcomes. Matrix metalloproteinases (MMPs) contribute to worse airway disease and emphysema. Given that the AAT protein is an antiprotease, we hypothesised that MMPs play a modifying role among AAT-deficient individuals. Methods We studied PI*MZ (n=39) and PI*ZZ (n=27) individuals from the Genomic Research in Alpha-1 Antitrypsin Deficiency and Sarcoidosis Study cohort. MMP (MMP3, MMP9, MMP10, MMP12 and MMP15) gene expression was assessed in bronchoalveolar lavage cells and peripheral blood mononuclear cells. Plasma protein MMP (MMP3, MMP9, MMP10 and MMP12) expression was assessed using SomaScan and BAL MMP15 protein using ELISA. MMP values were log-transformed, and linear regression analyses were used to assess lung function, patient-reported outcomes and CT emphysema adjusted for age, body mass index, sex and duration of smoking. Results Alveolar MMP3 and MMP15 were uniquely associated with worse lung function, patient-reported outcomes and emphysema among PI*MZ individuals. MMP10 was associated with less disease severity among PI*MZ individuals. Discussion Our study shows that alveolar MMP3 and MMP15 may uniquely contribute to disease among PI*MZ individuals, raising the possibility that they could serve as biomarkers or therapeutic targets in this highly prevalent COPD phenotype. Furthermore, we show that MMP10 may serve a protective effect. In aggregate, these data support further studies of the MMP pathway among lung-affected PI*MZ individuals, as they may serve as biomarkers or pharmacological targets in future studies.
International Validation of a Novel PEACE Scale to Improve the Quality of Upper Gastrointestinal Mucosal Inspection During Endoscopy
Romańczyk, Marcin , Desai, Madhav , Abe, Seiichiro , Alkandari, Asma , Beyna, Torsten , Bisschops, Raf , Budzyń, Krzysztof , Grover, Samir C. , Gyawali, C. Prakash, Inoue, Haruhiro , Iyer, Prasad G. , Srinivasan, Sachin , Gyawali, C. Prakash , Hassan, Cesare , Gyawali, C P , Hassan, Cesare , Bisschops, Raf , Grover, Samir C , Kaminski, Michal Filip , Bugdol, Monika Natalia , Messmann, Helmut , Ragunath, Krish , Saito, Yutaka , Teshima, Christopher , Yadlapati, Rena , Sharma, Prateek

Clinical and Translational Gastroenterology | November 14, 2024 | Volume: 16 | Issue: 1 | Pages: e00786

10.14309/ctg.0000000000000786 | PMID 39853720 Get It

INTRODUCTION: The performance of a high quality esophagogastroduodenoscopy (EGD) is dependent on the mucosal cleanliness. Recently, the Polprep: Effective Assessment of Cleanliness in EGD (PEACE) scale was created to assess the degree of mucosal cleanliness during EGD. The aim of this study was to validate this scoring system in a cohort of international endoscopists. METHODS: In total, 39 EGD videos, with different degrees of mucosal cleanliness were retrieved from a previously conducted prospective trial. All experts rated the cleanliness of the mucosa on each video using the PEACE scale. To evaluate agreement of all scores (0–3), intraclass correlation coefficient 2.1 was used. The agreement on adequate (scores 2 and 3) and inadequate (scores 0 and 1) cleanliness was assessed using kappa values. RESULTS: Videos evaluating esophagus, stomach, and duodenum cleanliness were reviewed by 16 endoscopists. The PEACE scores demonstrated good agreement (intraclass correlation coefficient 0.82, 95% CI 0.75–0.89), especially for esophagus (0.84; 95% CI 0.71–0.95) and stomach (0.81; 95% CI 0.69–0.91), while agreement was moderate for the duodenum (0.69; 95% CI 0.51–0.87). The agreement was similar between Eastern (0.86; 95% CI 0.79–0.92) and Western experts (0.80; 95% CI 0.72–0.88). Similarly, agreement regarding adequate cleanliness was comparable between Eastern (0.70; 95% CI 0.55–0.85) and Western (0.74; 95% CI 0.64–0.84) endoscopists being overall 0.75 (95% CI 0.65–0.85). DISCUSSION: The PEACE scoring system is a simple and reliable scale to assess the cleanliness during EGD. The score is now validated among international experts with high concordance, justifying its use in clinical practice.
International validation of a PEACE scale assessing cleanliness during esophagogastroduodenoscopy to improve the quality of inspection during endoscopy
Romańczyk, Monika , Desai, Madhav , Abe, Seiichiro , Alkandari, Asma , Beyna, Torsten , Budzyń, Krzysztof , Grover, Samir C. , Gyawali, P. , Iyer, Prasad G. , Srinivasan, Sachin , Grover, Samir C , Kaminski, Michal Filip , Bisschops, Raf , Bugdol, Marcin Dominik , Gyawali, P., Inoue, H., Messmann, Helmut , Ragunath, Krish , Saito, Yutaka , Teshima, Christopher , Yadlapati, Rena , Hassan, Cesare , Sharma, Prateek

Endoscopy | April 23, 2024 | Volume: 56 | Issue: S 02 | Pages: S27-S28

10.1055/s-0044-1782743 Get It

NCCN Guidelines® Insights: B-Cell Lymphomas, Version 6.2023
Advani, Ranjana H. , Andreadis, B., Chang, Julie , Christian, Beth , deVos, Sven, Fayad, Luis , Hamid, Muhammad Saad , Hernandez‐Ilizaliturri, Francisco J. , Kaminski, Mark , Karimi, Yasmin , King, Rebecca L. , Krivacic, Susan, LaCasce, Ann S. , Messmer, Marcus , Narkhede, Mayur , Rabinovitch, Rachel , Roberts, Kenneth B. , Smith, Stephen D. , Svoboda, Jakub , Swinnen, Lode J., Tuscano, Joseph M. , Dwyer, Mary A., Sundar, Hema, Advani, Ranjana H , Karimi, Yasmin H , Zelenetz, Andrew D. , Gordon, Leo I. , Abramson, Jeremy S. , Bartlett, Nancy L. , Budde, Lihua E. , Caimi, Paolo F. , Dholaria, Bhagirathbhai , Habermann, Thomas M. , Hu, Boyu , Kelsey, Chris R. , Lim, Megan S. , Ramakrishnan, Praveen , Reid, Erin G , Saeed, Hayder , Vose, Julie M.

Journal of the National Comprehensive Cancer Network | November 7, 2023 | Volume: 21 | Issue: 11 | Pages: 1118-1131

10.6004/jnccn.2023.0057 | PMID 37935098 Get It

Novel targeted therapies (small molecule inhibitors, antibody–drug conjugates, and CD19-directed therapies) have changed the treatment landscape of relapsed/refractory B-cell lymphomas. Bruton’s tyrosine kinase (BTK) inhibitors continue to evolve in the management of mantle cell lymphoma (MCL), in both the relapsed/refractory and the frontline setting. Anti-CD19 CAR T-cell therapies are now effective and approved treatment options for relapsed/refractory follicular lymphoma (FL), diffuse large B-cell lymphoma (DLBCL), and MCL. Bispecific T-cell engagers represent a novel immunotherapeutic approach for relapsed FL and DLBCL after multiple lines of therapies, including prior CAR T-cell therapy. These NCCN Guideline Insights highlight the significant updates to the NCCN Guidelines for B-Cell Lymphomas for the treatment of FL, DLBCL, and MCL.
Subclonal TP53 mutations are frequent and predict resistance to radioimmunotherapy in follicular lymphoma
Burack, Richard , Adlowitz, Diana G. , Spence, Janice M., Shadman, Mazyar , Spier, Catherine, Kaminski, Mark , Leonard, John P. , Smith, Sonali M. , Friedberg, Jonathan W. , Burack, W Richard , Adlowitz, Diana , Shadman, Mazyar , Smith, Sonali M , Li, Hongli , Rimsza, Lisa M. , LeBlanc, Michael

Blood Advances | June 28, 2023 | Volume: 7 | Issue: 17 | Pages: 5082-5090

10.1182/bloodadvances.2022009467 | PMID 37379264 Get It

Abstract Although TP53 is commonly mutated in transformed follicular lymphoma, mutations are reported in <5% of pretreatment follicular lymphoma (FL) specimens. We assayed archival follicular B-cell non-Hodgkin lymphoma specimens from a completed clinical trial, Southwest Oncology Group S0016, a phase 3 randomized intergroup trial of CHOP (cyclophosphamide, hydroxydaunorubicin, oncovin, and prednisone) chemotherapy plus R-CHOP (rituximab-CHOP) compared with CHOP chemotherapy plus 131-iodine tositumomab (radioimmunotherapy [RIT]-CHOP). Subclonal TP53 mutations (median allele frequency 0.02) were found in 25% of diagnostic FL specimens and in 27% of a separate validation cohort. In the R-CHOP arm, pathogenic TP53 mutations were not associated with progression-free survival (PFS) (10-year PFS 43% vs 44%). In contrast, among patients with no detectable pathogenic TP53 mutation, RIT-CHOP was associated with a longer PFS than with R-CHOP (10-year PFS 67% vs 44%; hazard ratio = 0.49; P = .008). No relationship was detected between PFS and the extent of activation-induced cytidine deaminase (AICDA)–mediated heterogeneity. In summary, subclonal TP53 mutations are common in FL and are a distinct phenomenon from AICDA-mediated genetic heterogeneity. The absence of a detectable subclonal mutation in TP53 defined a population that particularly benefited from RIT.
A “FUNCTIONAL CURE” MAY BE ACHIEVABLE IN A SUBSET OF PATIENTS WITH FOLLICULAR LYMPHOMA TREATED WITH CHEMOIMMUNOTHERAPY: 15‐YEAR FOLLOW‐UP OF PHASE III SWOG‐S0016
Li, H., Leonard, John P. , Kaminski, Mark , Spier, Catherine, Dakhil, Shaker R. , Smith, Sonali M. , Friedberg, Jonathan W. , Shadman, Mazyar , Rimsza, Lisa M. , Gopal, Ajay K. , LeBlanc, Michael

Hematological Oncology | June 9, 2023 | Volume: 41 | Issue: S2 | Pages: 116-117

10.1002/hon.3163_79 Get It

P788 Endoscopic management of patients with high-risk colorectal colitis-associated neoplasia: a Delphi study
Bak, M , Suzuki, Noriko , Matsumoto, Takayuki , Kiesslich, R, Coron, Emmanuel , Vries, Annemarie de , Hart, Adam , Pioche, M, Oldenburg, Bas , Bak, M, Albéniz, Eduardo , East, James E. , Coelho–Prabhu, Nayantara , Saitō, Yutaka , Banerjee, Rupa , Kaminski, Michal Filip , Woude, C. Janneke van der , Bisschops, Raf , Hart, A, Itzkowitz, Steven H. , Moons, Leon M.G.

Journal of Crohn's and Colitis | January 30, 2023 | Volume: 17 | Issue: Supplement_1 | Pages: i920-i921

10.1093/ecco-jcc/jjac190.0918 Get It

Abstract Background Current guidelines recommend endoscopic resection of visible and endoscopically resectable colorectal colitis-associated neoplasia (CAN) in patients with inflammatory bowel disease (IBD). However, patients with high risk CAN are often not amenable to conventional resections techniques and a consensus approach for the endoscopic management of these lesions is presently lacking. This Delphi study aims to reach consensus amongst experts on the endoscopic management of these lesions. Methods A three-round modified Delphi process was conducted to reach consensus amongst worldwide IBD and/or endoscopy experts (n=18) from three continents. Experts were chosen based on the extensive clinical experience with IBD and/or EMR/ESD in patients with IBD, and the authorship on multiple peer-reviewed publications on CAN, the endoscopic resection of CAN and/or EMR/ESD. Consensus was considered if ≥ 75% agreed or disagreed. Quality of evidence was assessed by the criteria of the Cochrane Collaboration group. Results Consensus was reached on all statements (n=14). Experts agreed on a definition for CAN and high-risk CAN (HR-CAN). Consensus was reached on the examination of the colon with enhanced endoscopic imaging prior to resection, the endoscopic resectability of a HR-CAN lesion and endoscopic assessment and standard report of CAN lesions. In addition, experts agreed on type of resections of HR-CAN (< 20mm, >20 mm, with or without good lifting), endoscopic success (technical success and outcomes), histologic assessment and follow-up in HR-CAN. Conclusion This is the first step in developing international consensus-based recommendations for endoscopic management of (HR-)CAN. Although the quality of available evidence was considered low, consensus was reached on several aspects of the management of (HR-)CAN. The present work and proposed standardization might benefit future studies.