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219 citation(s) found for "Yu, Qing".

Characterization of amyloid‐related imaging abnormality in the DIAN‐TU‐001 trial
Hofmann, Carsten, Wang, Guoqiao , Chen, Charles D., Gauthier, Serge , Holdridge, Karen C. , Klein, Gregory , Mummery, Catherine J. , Preboske, Gregory M., Santacruz, Anna , Yaari, R. , Salloway, Stephen , Clifford, David B., Unit, Dominantly Inherited Alzheimer Network Trials, Joseph‐Mathurin, Nelly , Llibre‐Guerra, Jorge J. , McCullough, Austin , Li, Yan , Wojtowicz, Jakub , Wang, Qing , Gordon, Brian A. , Brooks, William S. , Hsiung, Ging‐Yuek Robin , Jack, Clifford R. , Masellis, Mario , Wallon, David , Xiong, Chengjie , McDade, Eric , Bateman, Randall J. , Benzinger, Tammie L.S. , Unit, Dominantly Inherited Alzheimer Network Trials

Alzheimer's & Dementia | December 31, 2021 | Volume: 17 | Issue: S1 | Pages: No page available

10.1002/alz.056393 Get It

AbstractBackgroundAmyloid‐related imaging abnormalities (ARIA), edema (E) or hemorrhagic (H) type, have been reported in trials of anti‐β‐amyloid passive immunotherapies in sporadic and dominantly inherited Alzheimer Disease (DIAD). However, beyond APOE‐ɛ4 the risk factors and clinical implications of ARIA are not well understood, especially in DIAD populations. Here we characterize ARIA, focusing on ARIA‐E in the DIAN‐TU‐001 trial evaluating gantenerumab and solanezumab in DIAD.MethodThe DIAN‐TU‐001 trial enrolled 194 participants, including 144 DIAD mutation‐carriers receiving gantenerumab (n=52), solanezumab (n=52), or a placebo (n=40). Clinical assessments included the Clinical Dementia Rating (CDR). Imaging assessments included PiB‐PET and safety MR, including T2‐FLAIR and T2*‐GRE. Treatment dosage and APOE‐ɛ4 status were also reported.ResultEleven participants developed a total of 14 ARIA‐E episodes (discovered on scheduled safety MR) and three had associated mild symptoms reported in retrospect (e.g. headache, imbalance disorder). Though one ARIA‐E case was observed in the solanezumab arm, the following results focus on the gantenerumab arm to prevent unblinding. Recipients of gantenerumab were more likely to develop ARIA‐E compared to placebo (odds ratio (OR)=9.29, 95% confidence interval (CI)=[1.1,75.9], p‐value<0.05). ARIA‐E participants were PiB‐PET+ and 60% were CDR>0. APOE‐ɛ4 tends to be associated with risk for developing ARIA‐E (OR=5.0, 95%CI=[1.0,30.4], p‐value=0.055). ARIA‐E were not observed at initial 225mg dose and were first observed after a titration step (within 4‐24 weeks, after 1‐6 injections, Table 1). Time‐to‐resolution of ARIA‐E was 10.4±6.2weeks. Seven of ten ARIA‐E patients paused/reduced dose escalation and three discontinued treatment. Overall, developing ARIA‐E did not increase the odds of trial discontinuation (OR=1.57, 95%CI=[0.34,7.33], p‐value=0.57). ARIA‐E occurred primarily in the occipital lobe (71%) with associated incident ARIA‐H (microhemorrhages or superficial siderosis) in 60% of ARIA‐E participants. ARIA‐E size was associated with microhemorrhage count (Spearman’s rho=0.72, p‐value<0.05), rate of change (rho=0.78, p‐value<0.01), and baseline PiB‐PET (rho=0.68, p‐value<0.05). Normalizing by baseline, PiB‐PET decreased similarly in ARIA‐E+ (‐0.21±0.20) and ARIA‐E‐ (‐0.16±0.20) participants.ConclusionIn DIAD, gantenerumab dose over 225mg increased ARIA‐E risk, possibly more for APOE‐ɛ4 carriers. ARIA‐E was reversible, generally asymptomatic, and without increased odds of trial discontinuation. These aspects of drug response give insights for managing ARIA‐E occurrence in future trials.
Inhibition of triple‑negative breast cancer proliferation and motility by reactivating p53 and inhibiting overactivated Akt
Shen, Renhui, Richard, Seth , Liu, Yu , Jalalirad, Mohammad, Cleary, Margot P. , D’Assoro, Antonio B., Gradilone, Sergio A. , Yang, Da‐Qing , D'Assoro, Antonio B, Gradilone, Sergio A , Cao, Wei

Oncology Reports | December 24, 2021 | Volume: 47 | Issue: 2 | Pages: No page available

10.3892/or.2021.8252 | PMID 34958116 Get It

Health‐related quality of life is dynamic in alcoholic hepatitis and responds to improvement in liver disease and reduced alcohol consumption
Madathanapalli, Abhishek, Tang, Qing , Lammert, Craig , Shah, Vijay H. , Chalasani, Naga , Desai, Archita P. , Desai, Archita P , Samala, Niharika , Sanyal, Arun J.

Alcoholism: Clinical and Experimental Research | December 4, 2021 | Volume: 46 | Issue: 2 | Pages: 252-261

10.1111/acer.14756 | PMID 34862610 Get It

AbstractBackgroundThe impact of alcoholic hepatitis (AH) on health‐related quality of life (HRQOL) remains inadequately described. We aimed to characterize HRQOL in AH and heavy drinkers (HD), and its associations with clinical variables and outcomes.MethodsThis is a post hoc analysis of participants in the Translational Research and Evolving Alcoholic Hepatitis Treatment 001 study (NCT02172898). HRQOL was measured using Short Form Health Survey (SF‐36). Mean SF‐36 scores were compared in AH and HD with two‐sample t‐tests. Associations among clinical characteristics, 30‐day mortality, and SF‐36 mental and physical component scores (MC, PC) were investigated with generalized linear and logistic multivariate regression models. Trends of MC and PC scores were analyzed using one‐way ANOVA.ResultsParticipants with AH (n = 258) and HD (n = 181) were similar demographically. AH cases had a mean Model for End‐stage Liver Disease (MELD) score of 23 (7). AH cases had lower PC scores [37 (10) vs. 48 (11), p < 0.001] but higher MC scores [37 (13) vs. 32 (13), p < 0.001]. MC scores were independently associated with age, male gender, and daily alcohol consumption; PC scores were independently associated with age, BMI, alanine aminotransferase concentration, alkaline phosphatase concentration, white blood cell counts, and the presence of ascites. With each 5‐point decrease in the baseline PC score, the adjusted odds of dying within 30 days increased by 26.7% (95% CI 1% to 46%). Over time, HRQOL in AH improved (day 0 to day 180 delta PC score: 4.5 ± 1.7, p = 0.008; delta MC score: 9.8 ± 2.0, p < 0.001). Participants with a MELD score <15 by day 180 had greater increases in PC scores than those with MELD score ≥15 (delta PC score 7.1 ± 1.8 vs. −0.7 ± 2.3, p = 0.009), while those abstinent by day 180 had greater increases in MC scores than those who were not abstinent (delta MC score 9.1 ± 1.8 vs. 2.8 ± 2.4, p = 0.044).ConclusionsHRQOL is poor in AH and HD in a domain‐specific pattern. Independent of MELD score, lower baseline HRQOL is associated with higher 30‐day mortality. Over time, HRQOL improves with greater gains seen in individuals with improved MELD scores and those who were abstinent.
Corrigendum to ‘Induction of Wnt signaling antagonists and p21-activated kinase enhances cardiomyocyte proliferation during zebrafish heart regeneration’
Peng, Xiangwen , Lai, Kaa Seng, She, Peilu , Wang, Tingting , Zhou, Yating , Sun, Jianjian , Jin, Da‐Qing , Liao, Lujian , Liu, Jiandong , Zhong, Tao P. , Kang, Junsu , Li, Guobao, Jin, Daqing, Xu, Xiaolei , Lee, Ethan N. , Poss, Kenneth D.

Journal of Molecular Cell Biology | October 20, 2021 | Volume: 13 | Issue: 12 | Pages: 921-921

10.1093/jmcb/mjab064 | PMID 35092682 Get It

Defining Proximity Proteome of Histone Modifications by Antibody-Mediated Protein A-APEX2 Labeling
Li, Xinran , Zhou, Jiaqi , Zhao, Wenjuan , Wen, Qing , Wang, Weijie , Peng, Huipai , Gao, Yuan , Bouchonville, Kelly J. , Offer, Steven M. , Chan, Kui Ming , Wang, Zhiquan , Li, Nan , Gan, Haiyun , Offer, Steven M , Wang, Zhiquan

Genomics, Proteomics & Bioinformatics | September 30, 2021 | Volume: 20 | Issue: 1 | Pages: 87-100

10.1016/j.gpb.2021.09.003 | PMID 34555496 Get It

Abstract Proximity labeling catalyzed by promiscuous enzymes, such as APEX2, has emerged as a powerful approach to characterize multiprotein complexes and protein–protein interactions. However, current methods depend on the expression of exogenous fusion proteins and cannot be applied to identify proteins surrounding post-translationally modified proteins. To address this limitation, we developed a new method to label proximal proteins of interest by antibody-mediated protein A-ascorbate peroxidase 2 (pA-APEX2) labeling (AMAPEX). In this method, a modified protein is bound in situ by a specific antibody, which then tethers a pA-APEX2 fusion protein. Activation of APEX2 labels the nearby proteins with biotin; the biotinylated proteins are then purified using streptavidin beads and identified by mass spectrometry. We demonstrated the utility of this approach by profiling the proximal proteins of histone modifications including H3K27me3, H3K9me3, H3K4me3, H4K5ac, and H4K12ac, as well as verifying the co-localization of these identified proteins with bait proteins by published ChIP-seq analysis and nucleosome immunoprecipitation. Overall, AMAPEX is an efficient method to identify proteins that are proximal to modified histones.
Acquired RAD51C Promoter Methylation Loss Causes PARP Inhibitor Resistance in High-Grade Serous Ovarian Carcinoma
Nesic, Ksenija , Kondrashova, Olga , Hurley, Rachel M. , McGehee, Cordelia D. , Ho, Gwo‐Yaw , Lieschke, Elizabeth , Dall, Genevieve , Bound, Nirashaa , Shield‐Artin, Kristy , Musafer, Ashan, Chai, Zi Qing, Ghamsari, Mohammad Reza Eftekhariyan , Harrell, Maria I., Kee, Damien , Olesen, Inger, McNally, Orla , Study, Australian Ovarian Cancer, DeFazio, Anna , Bowtell, David D.L. , Swisher, Elizabeth M. , Weroha, S. John , Nones, Kátia , Waddell, Nicola , Wakefield, Matthew J. , Scott, Clare L. , Ho, Gwo-Yaw , Ghamsari, Mohammad Reza Eftekhariyan , Kee, Damien , Fazio, Anna de , Swisher, Elizabeth M , Nones, Katia , Waddell, Nicola , Kaufmann, Scott H , Dobrovic, Alexander , Wakefield, Matthew J , Scott, Clare L , Kondrashova, Olga , Bowtell, David D , Vandenberg, Cassandra J. , Radke, Marc R. , Traficante, Nadia , Kaufmann, Scott H.

Cancer Research | July 28, 2021 | Volume: 81 | Issue: 18 | Pages: 4709-4722

10.1158/0008-5472.can-21-0774 | PMID 34321239 Get It

Abstract In high-grade serous ovarian carcinoma (HGSC), deleterious mutations in DNA repair gene RAD51C are established drivers of defective homologous recombination and are emerging biomarkers of PARP inhibitor (PARPi) sensitivity. RAD51C promoter methylation (meRAD51C) is detected at similar frequencies to mutations, yet its effects on PARPi responses remain unresolved. In this study, three HGSC patient-derived xenograft (PDX) models with methylation at most or all examined CpG sites in the RAD51C promoter show responses to PARPi. Both complete and heterogeneous methylation patterns were associated with RAD51C gene silencing and homologous recombination deficiency (HRD). PDX models lost meRAD51C following treatment with PARPi rucaparib or niraparib, where a single unmethylated copy of RAD51C was sufficient to drive PARPi resistance. Genomic copy number profiling of one of the PDX models using SNP arrays revealed that this resistance was acquired independently in two genetically distinct lineages. In a cohort of 12 patients with RAD51C-methylated HGSC, various patterns of meRAD51C were associated with genomic “scarring,” indicative of HRD history, but exhibited no clear correlations with clinical outcome. Differences in methylation stability under treatment pressure were also observed between patients, where one HGSC was found to maintain meRAD51C after six lines of therapy (four platinum-based), whereas another HGSC sample was found to have heterozygous meRAD51C and elevated RAD51C gene expression (relative to homozygous meRAD51C controls) after only neoadjuvant chemotherapy. As meRAD51C loss in a single gene copy was sufficient to cause PARPi resistance in PDX, methylation zygosity should be carefully assessed in previously treated patients when considering PARPi therapy. Significance: Homozygous RAD51C methylation is a positive predictive biomarker for sensitivity to PARP inhibitors, whereas a single unmethylated gene copy is sufficient to confer resistance.
Critical roles of cytokine storm and secondary bacterial infection in acute kidney injury development in COVID‐19: A multi‐center retrospective cohort study
Li, X J , Meng, Yu , Yin, Haiyan , Gao, Wenyong , Yang, Xiao , Xu, Dian‐Shuang, Cai, Xingdong , Guan, Yin, Lerman, Lilach O. , Peng, Zhiyong , Zhou, Hourong, Li, Xia-Qing , Liu, Han

Journal of Medical Virology | July 27, 2021 | Volume: 93 | Issue: 12 | Pages: 6641-6652

10.1002/jmv.27234 | PMID 34314040 Get It

AbstractAcute kidney injury (AKI) may develop in patients with coronavirus disease 2019 (COVID‐19) and is associated with in‐hospital death. We investigated the incidence of AKI in 223 hospitalized COVID‐19 patients and analyzed the influence factors of AKI. The incidence of cytokine storm syndrome and its correlation with other clinicopathologic variables were also investigated. We retrospectively enrolled adult patients with virologically confirmed COVID‐19 who were hospitalized at three hospitals in Wuhan and Guizhou, China between February 13, 2020, and April 8, 2020. We included 124 patients with moderate COVID‐19 and 99 with severe COVID‐19. AKI was present in 35 (15.7%) patients. The incidence of AKI was 30.3% for severe COVID‐19 and 4.0% for moderate COVID‐19 (p < 0.001). Furthermore, cytokine storm was found in 30 (13.5%) patients and only found in the severe group. Kidney injury at admission (odds ratio [OR]: 3.132, 95% confidence interval [CI]: 1.150–8.527; p = 0.025), cytokine storm (OR: 4.234, 95% CI: 1.361–13.171; p = 0.013), and acute respiratory distress syndrome (ARDS) (OR: 7.684, 95% CI: 2.622–22.523; p < 0.001) were influence factors of AKI. Seventeen (48.6%) patients who received invasive mechanical ventilation developed AKI, of whom 64.7% (11/17) died. Up to 86.7% of AKI patients with cytokine storms may develop a secondary bacterial infection. The leukocyte counts were significantly higher in AKI patients with cytokine storm than in those without (13.0 × 10⁹/L, interquartile range [IQR] 11.3 vs. 8.3 × 10⁹/L, IQR 7.5, p = 0.005). Approximately 1/6 patients with COVID‐19 eventually develop AKI. Kidney injury at admission, cytokine storm and ARDS are influence factors of AKI. Cytokine storm and secondary bacterial infections may be responsible for AKI development in COVID‐19 patients.
Metabolic Enzyme DLST Promotes Tumor Aggression and Reveals a Vulnerability to OXPHOS Inhibition in High-Risk Neuroblastoma
Anderson, Nicole , Qin, Xiaodan , Finan, Jennifer M. , Lam, Andrew , Athoe, Jacob, Missiaen, Rindert , Skuli, Nicolas , Kennedy, Annie, Saini, Amandeep S. , Tao, Ting , Zhu, Shizhen , Nissim, Itzhak , Look, A. Thomas , Qing, Guoliang , Simon, M. Celeste , Feng, Hui , Tao, Ting , Anderson, Nicole M., Kennedy, Annie

Cancer Research | July 7, 2021 | Volume: 81 | Issue: 17 | Pages: 4417-4430

10.1158/0008-5472.can-20-2153 | PMID 34233924 Get It

Abstract High-risk neuroblastoma remains therapeutically challenging to treat, and the mechanisms promoting disease aggression are poorly understood. Here, we show that elevated expression of dihydrolipoamide S-succinyltransferase (DLST) predicts poor treatment outcome and aggressive disease in patients with neuroblastoma. DLST is an E2 component of the α-ketoglutarate (αKG) dehydrogenase complex, which governs the entry of glutamine into the tricarboxylic acid cycle (TCA) for oxidative decarboxylation. During this irreversible step, αKG is converted into succinyl-CoA, producing NADH for oxidative phosphorylation (OXPHOS). Utilizing a zebrafish model of MYCN-driven neuroblastoma, we demonstrate that even modest increases in DLST expression promote tumor aggression, while monoallelic dlst loss impedes disease initiation and progression. DLST depletion in human MYCN-amplified neuroblastoma cells minimally affected glutamine anaplerosis and did not alter TCA cycle metabolites other than αKG. However, DLST loss significantly suppressed NADH production and impaired OXPHOS, leading to growth arrest and apoptosis of neuroblastoma cells. In addition, multiple inhibitors targeting the electron transport chain, including the potent IACS-010759 that is currently in clinical testing for other cancers, efficiently reduced neuroblastoma proliferation in vitro. IACS-010759 also suppressed tumor growth in zebrafish and mouse xenograft models of high-risk neuroblastoma. Together, these results demonstrate that DLST promotes neuroblastoma aggression and unveils OXPHOS as an essential contributor to high-risk neuroblastoma. Significance: These findings demonstrate a novel role for DLST in neuroblastoma aggression and identify the OXPHOS inhibitor IACS-010759 as a potential therapeutic strategy for this deadly disease.
Nonselective beta‐blockers are associated with a lower risk of hepatocellular carcinoma among cirrhotic patients in the United States
Wijarnpreecha, Karn , Li, Fang , Xiang, Yang , Zhu, Cong , Maroufy, Vahed , Tao, Wei , Pham, Huy Anh, Zhou, Yujia , Li, Jianfu , Zhang, Xinyuan , Xu, Hua , Tao, Cui , Xu, Hua , Taner, C. Burcin , Tao, Cui , Wijarnpreecha, Karn , Li, Fang , Xu, Xun, Wang, Qing , Tao, Wei, Dang, Yifang , Yang, Liu

Alimentary Pharmacology & Therapeutics | July 5, 2021 | Volume: 54 | Issue: 4 | Pages: 481-492

10.1111/apt.16490 | PMID 34224163 Get It

SummaryBackgroundPrevious studies have demonstrated an association between nonselective beta‐blockers (NSBBs) and lower risk of hepatocellular carcinoma (HCC) in cirrhosis. However, there has been no population‐based study investigating the risk of HCC among cirrhotic patients treated using carvedilol.AimsTo determine the risk of HCC among cirrhotic patients with NSBBs including carvedilol.MethodsThis retrospective cohort study utilised the Cerner Health Facts database in the United States from 2000 to 2017. Kaplan‐Meier estimate, Cox proportional hazards regression, and propensity score matching (PSM) were used to test the HCC risk among the carvedilol, nadolol, and propranolol groups compared with no beta‐blocker group.ResultsThe final cohort comprised 107 428 eligible patients. The 100‐month cumulative HCC incidence of NSBBs was significantly lower than the no beta‐blocker group (carvedilol (11.24%) vs no beta‐blocker (15.69%), nadolol (27.55%) vs no beta‐blocker (32.11%), and propranolol (26.17%) vs no beta‐blocker (28.84%) (P values < 0.0001). NSBBs were associated with a significantly lower risk of HCC (Hazard ratio: carvedilol 0.61 (95% CI 0.51‐0.73), nadolol 0.74 (95% CI 0.63‐0.87), propranolol 0.75 (95% CI 0.66‐0.84) after PSM in the multivariate cox analysis. In subgroup analysis, NSBBs reduced the risk of HCC in cirrhosis with complications and non‐alcoholic cirrhosis.ConclusionsNSBBs, including carvedilol, were associated with a significantly decreased risk of HCC in patients with cirrhosis when compared with no beta‐blocker regardless of complications status. Future randomised‐controlled studies comparing the incidence of HCC among NSBBs should elucidate which NSBB would be the best option to prevent HCC in cirrhosis.