Citations

Mayo Clinic

Clear

921 citation(s) found for "Qi, Jun".

Sex differences in NSAID‐induced perturbation of human intestinal barrier function and microbiota
Edogawa, Shoko, Peters, Stéphanie , Jenkins, Gregory D. , Gurunathan, Sakteesh, Sundt, Wendy, Johnson, Stephen , Lennon, Ryan J. , Dyer, Roy B. , Camilleri, Michael , Kashyap, Purna , Farrugia, Gianrico, Grover, Madhusudan , Peters, Stephanie A, Gurunathan, Sakteesh V, Sundt, Wendy J., Johnson, Stephen, Farrugia, Gianrico , Chen, Jun , Singh, Ravinder J.

The FASEB Journal | June 13, 2018 | Volume: 32 | Issue: 12 | Pages: 6615-6625

10.1096/fj.201800560r | PMID 29897814 Get It

ABSTRACT Intestinal barrier function and microbiota are integrally related and play critical roles in maintenance of host physiology. Sex is a key biologic variable for several disorders. Our aim was to determine sex‐based differences in response to perturbation and subsequent recovery of intestinal barrier function and microbiota in healthy humans. Twenty‐three volunteers underwent duodenal biopsies, mucosal impedance, and in vivo permeability measurement. Permeability testing was repeated after administration of indomethacin, then 4 to 6 wk after its discontinuation. Duodenal and fecal microbiota composition was determined using 16S rRNA amplicon sequencing. Healthy women had lower intestinal permeability and higher duodenal and fecal microbial diversity than healthy men. Intestinal permeability increases after indomethacin administration in both sexes. However, only women demonstrated decreased fecal microbial diversity, including an increase in Prevotella abundance, after indomethacin administration. Duodenal microbiota composition did not show sex‐specific changes. The increase in permeability and microbiota changes normalized after discontinuation of indomethacin. In summary, women have lower intestinal permeability and higher microbial diversity. Intestinal permeability is sensitive to perturbation but recovers to baseline. Gut microbiota in women is sensitive to perturbation but appears to be more stable in men. Sex‐based differences in intestinal barrier function and microbiome should be considered in future studies.—Edogawa, S., Peters, S. A., Jenkins, G. D., Gurunathan, S. V., Sundt, W. J., Johnson, S., Lennon, R. J., Dyer, R. B., Camilleri, M., Kashyap, P. C., Farrugia, G., Chen, J., Singh, R. J., Grover, M. Sex differences in NSAID‐induced perturbation of human intestinal barrier function and microbiota. FASEB J. 32, 6615–6625 (2018). www.fasebj.org
Collaborative Method Performance Study of the Measurement of Nicotine, Its Metabolites, and Total Nicotine Equivalents in Human Urine
Bernert, John T., Benowitz, Neal L. , Feng, June, Jacob, Peyton , McGahee, Ernest, Caudill, Samuel P., Scherer, Gerhard , Scherer, Max , Pluym, Nikola , Doig, Mira, Newland, Kirk, Murphy, Sharon E. , Caron, Nicolas , Sander, Lane C. , Shimizu, Makiko , Kim, Sung Hoon , Langman, Loralie J., Pritchett, Jeanita S., Sniegoski, Lorna T., Pirkle, James L. , Wang, Lanqing , Feng, Jun , Yamazaki, Hiroshi , Li, Yao , Blount, Benjamin C.

Cancer Epidemiology, Biomarkers & Prevention | May 31, 2018 | Volume: 27 | Issue: 9 | Pages: 1083-1090

10.1158/1055-9965.epi-17-1127 | PMID 29853481 Get It

AbstractBackground: Biomarkers of tobacco exposure have a central role in studies of tobacco use and nicotine intake. The most significant exposure markers are nicotine itself and its metabolites in urine. Therefore, it is important to evaluate the performance of laboratories conducting these biomarker measurements.Methods: This report presents the results from a method performance study involving 11 laboratories from 6 countries that are currently active in this area. Each laboratory assayed blind replicates of seven human urine pools at various concentrations on three separate days. The samples included five pools blended from smoker and nonsmoker urine sources, and two additional blank urine samples fortified with pure nicotine, cotinine, and hydroxycotinine standards. All laboratories used their own methods, and all were based on some form of liquid chromatography/tandem mass spectrometry.Results: Overall, good agreement was found among the laboratories in this study. Intralaboratory precision was good, and in the fortified pools, the mean bias observed was < + 3.5% for nicotine, approximately 1.2% for hydroxycotinine, and less than 1% for cotinine (1 outlier excluded in each case). Both indirect and direct methods for analyzing the glucuronides gave comparable results.Conclusions: This evaluation indicates that the experienced laboratories participating in this study can produce reliable and comparable human urinary nicotine metabolic profiles in samples from people with significant recent exposure to nicotine.Impact: This work supports the reliability and agreement of an international group of established laboratories measuring nicotine and its metabolites in urine in support of nicotine exposure studies. Cancer Epidemiol Biomarkers Prev; 27(9); 1083–90. ©2018 AACR.
Anti‐viral therapy is associated with improved survival but is underutilised in patients with hepatitis B virus‐related hepatocellular carcinoma: real‐world east and west experience
Chen, Vincent , Yeh, Ming-Lun, Le, An K. , Jun, Mi Jung, Saeed, Waqar Khalid , Yang, Ju Dong , Huang, Chung‐Feng , Lee, H. Y., Tsai, Pei‐Chien , Giama, Nasra H., Kim, N. G., Nguyen, Phuong , Dang, Hansen , Ali, Hamdi A. , Zhang, N., Chuang, Wan‐Long , Roberts, Lewis R. , Yu, Ming‐Lung , Nguyen, Mindie H. , Chen, V L , Huang, C-F , Jun, D W , Yu, M-L , Nguyen, Mindie H , Roberts, Lewis R , Yeh, Ming-Lun , Yang, Ju Dong , Lee, M.‐H., Huang, Jee‐Fu , Dai, Chia-Yen , Lim, Young‐Suk

Alimentary Pharmacology & Therapeutics | May 24, 2018 | Volume: 48 | Issue: 1 | Pages: 44-54

10.1111/apt.14801 | PMID 29797518 Get It

SummaryBackgroundHepatitis B virus (HBV) is the leading cause of hepatocellular carcinoma (HCC) worldwide. It remains incompletely understood in the real world how anti‐viral therapy affects survival after HCC diagnosis.MethodsThis was an international multicentre cohort study of 2518 HBV‐related HCC cases diagnosed between 2000 and 2015. Cox proportional hazards models were utilised to estimate hazard ratios (HR) with 95% (CI) for anti‐viral therapy and cirrhosis on patients' risk of death.ResultsApproximately, 48% of patients received anti‐viral therapy at any time, but only 17% were on therapy at HCC diagnosis (38% at US centres, 11% at Asian centres). Anti‐viral therapy would have been indicated for >60% of the patients not on anti‐viral therapy based on American criteria. Patients with cirrhosis had lower 5‐year survival (34% vs 46%; P < 0.001) while patients receiving anti‐viral therapy had increased 5‐year survival compared to untreated patients (42% vs 25% with cirrhosis and 58% vs 36% without cirrhosis; P < 0.001 for both). Similar findings were seen for other patient subgroups by cancer stages and cancer treatment types. Anti‐viral therapy was associated with a decrease in risk of death, whether started before or after HCC diagnosis (adjusted HR 0.62 and 0.79, respectively; P < 0.001).ConclusionsAnti‐viral therapy improved overall survival in patients with HBV‐related HCC across cancer stages and treatment types but was underutilised at both US and Asia centres. Expanded use of anti‐viral therapy in HBV‐related HCC and better linkage‐to‐care for HBV patients are needed.
Faculty Opinions recommendation of Noninflammatory changes of microglia are sufficient to cause epilepsy.
Wu, Long‐Jun , Eyo, Ukpong B

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature | May 23, 2018 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.3410/f.732725584.793546013 Get It

Whole‐exome sequencing for variant discovery in blepharospasm
Tian, Jun , Vemula, Satya R. , Xiao, Jianfeng , Defazio, Giovanni , Petrucci, Simona , Gigante, Angelo Fabio , Rudzińska, Monika , Kennelly, Kathleen D., Uitti, Ryan J. , Gerpen, Jay A. van, Hedera, Peter , Trimble, Elizabeth J. , LeDoux, Mark S. , Van Gerpen, Jay A, LeDoux, Mark S , Rudzinska-Bar, Monika , Valente, Enza Maria , Wszołek, Zbigniew K.

Molecular Genetics & Genomic Medicine | May 17, 2018 | Volume: 6 | Issue: 4 | Pages: 601-626

10.1002/mgg3.411 | PMID 29770609 Get It

AbstractBackgroundBlepharospasm (BSP) is a type of focal dystonia characterized by involuntary orbicularis oculi spasms that are usually bilateral, synchronous, and symmetrical. Despite strong evidence for genetic contributions to BSP, progress in the field has been constrained by small cohorts, incomplete penetrance, and late age of onset. Although several genetic etiologies for dystonia have been identified through whole‐exome sequencing (WES), none of these are characteristically associated with BSP as a singular or predominant manifestation.MethodsWe performed WES on 31 subjects from 21 independent pedigrees with BSP. The strongest candidate sequence variants derived from in silico analyses were confirmed with bidirectional Sanger sequencing and subjected to cosegregation analysis.ResultsCosegregating deleterious variants (GRCH37/hg19) in CACNA1A (NM_001127222.1: c.7261_7262delinsGT, p.Pro2421Val), REEP4 (NM_025232.3: c.109C>T, p.Arg37Trp), TOR2A (NM_130459.3: c.568C>T, p.Arg190Cys), and ATP2A3 (NM_005173.3: c.1966C>T, p.Arg656Cys) were identified in four independent multigenerational pedigrees. Deleterious variants in HS1BP3 (NM_022460.3: c.94C>A, p.Gly32Cys) and GNA14 (NM_004297.3: c.989_990del, p.Thr330ArgfsTer67) were identified in a father and son with segmental cranio‐cervical dystonia first manifest as BSP. Deleterious variants in DNAH17, TRPV4, CAPN11, VPS13C, UNC13B, SPTBN4, MYOD1, and MRPL15 were found in two or more independent pedigrees. To our knowledge, none of these genes have previously been associated with isolated BSP, although other CACNA1A mutations have been associated with both positive and negative motor disorders including ataxia, episodic ataxia, hemiplegic migraine, and dystonia.ConclusionsOur WES datasets provide a platform for future studies of BSP genetics which will demand careful consideration of incomplete penetrance, pleiotropy, population stratification, and oligogenic inheritance patterns.
Novel engineered tendon-fibrocartilage-bone composite with cyclic tension for rotator cuff repair
Liu, Qian , Qi, Jun , Liu, Haoyu , Thoreson, Andrew R. , Amadio, Peter C. , Moran, Steven L. , Steinmann, Scott P. , Gingery, Anne , Zhao, Chunfeng , Hatta, Taku, Zhao, Chunfeng , Liu, Qian , Hatta, Taku , Gingery, Anne

Journal of Tissue Engineering and Regenerative Medicine | May 15, 2018 | Volume: 12 | Issue: 7 | Pages: 1690-1701

10.1002/term.2696 | PMID 29763517 Get It

Comparative Characterization of Osteoclasts Derived From Murine Bone Marrow Macrophages and RAW 264.7 Cells Using Quantitative Proteomics
Ng, Andrew YH, Shen, Shichen, Oursler, Merry Jo, Qu, Jun , Oursler, Merry J, Ng, Andrew YH, Tu, Chengjian , Xu, Ding , Yang, Shuying

JBMR Plus | May 11, 2018 | Volume: 2 | Issue: 6 | Pages: 328-340

10.1002/jbm4.10058 | PMID 30460336 Get It

ABSTRACT Osteoclasts are bone‐resorbing cells differentiated from macrophage/monocyte precursors in response to macrophage colony‐stimulating factor (M‐CSF) and receptor activator of NF‐κB ligand (RANKL). In vitro models are principally based on primary bone marrow macrophages (BMMs), but RAW 264.7 cells are frequently used because they are widely available, easy to culture, and more amenable to genetic manipulation than primary cells. Increasing evidence, however, has shown that the vastly different origins of these two cell types may have important effects on cell behavior. In particular, M‐CSF is a prerequisite for the differentiation of BMMs, by promoting survival and proliferation and priming the cells for RANKL induction. RAW 264.7 cells readily form osteoclasts in the presence of RANKL, but M‐CSF is not required. Based on these key differences, we sought to understand their functional implications and how it might affect osteoclast differentiation and related signaling pathways. Using a robust and high‐throughput proteomics strategy, we quantified the global protein changes in osteoclasts derived from BMMs and RAW 264.7 cells at 1, 3, and 5 days of differentiation. Data are available via ProteomeXchange with the identifier PXD009610. Correlation analysis of the proteomes demonstrated low concordance between the two cell types ( R 2 ≈ 0.13). Bioinformatics analysis indicate that RANKL‐dependent signaling was intact in RAW 264.7 cells, but biological processes known to be dependent on M‐CSF were significantly different, including cell cycle control, cytoskeletal organization, and apoptosis. RAW 264.7 cells exhibited constitutive activation of Erk and Akt that was dependent on the activity of Abelson tyrosine kinase, and the timing of Erk and Akt activation was significantly different between BMMs and RAW 264.7 cells. Our findings provide the first evidence for major discrepancies between BMMs and RAW 264.7 cells, indicating that careful consideration is needed when using the RAW 264.7 cell line for studying M‐CSF‐dependent signaling and functions. © 2018 American Society for Bone and Mineral Research. © 2018 The Authors. JBMR Plus published by Wiley Periodicals, Inc. on behalf of American Society for Bone and Mineral Research.
GWAS4D: multidimensional analysis of context-specific regulatory variant for human complex diseases and traits
Huang, Dandan , Yi, Xianfu , Zhang, Shijie , Zheng, Zhanye, Wang, Panwen , Sham, Pak C. , Wang, Junwen , Li, Mulin Jun , Wang, Junwen , Xuan, Chenghao

Nucleic Acids Research | May 3, 2018 | Volume: 46 | Issue: W1 | Pages: W114-W120

10.1093/nar/gky407 | PMID 29771388 Get It

Identification of the Effect of Amphiregulin on Keratinocytes and T Cells in Psoriasis
Lü, Jun , Squillace, Karen A., Pittelkow, Mark R.

Psoriasis Forum | April 30, 2018 | Volume: 16a | Issue: 2 | Pages: 4-8

10.1177/247553031016a00201 Get It

Background In addition to its fundamental functions in mediating the survival, proliferation, and migration of keratinocytes, increasing evidence suggests that the amphiregulin-epidermal growth factor receptor pathway has a major impact on cutaneous inflammation. Transgenic expression of amphiregulin in the epidermis of mice induces skin pathology with striking phenotypic similarity to that of psoriasis. Prominent T-cell and dendritic cell infiltrates are observed in the lesional skin from these mice. Objective In this study, we aimed to identify more fully the effect of amphiregulin on keratinocytes and T cells during cutaneous inflammation through examining relevant cytokines in the lesional skin as well as in human keratinocyte culture. Methods Using a multicytokine enzyme-linked immunosorbent assay, we found that amphiregulin directly induces the production of monocyte chemoattractant protein-1, interleukin-α, and interleukin-8 from keratinocytes in vitro. In addition, we examined the cutaneous expression of T-cell cytokines in amphiregulin transgenic mice compared with wild-type mice using quantitative polymerase chain reaction, which demonstrated upregulation of interferon-γ, vascular endothelial growth factor, and interleukin-4 in amphiregulin transgenic mice. Results and Conclusion Our study suggested that amphiregulin in the epidermis not only induces keratinocyte proliferation but also induces T-cell activation through a complex circuit of proinflammatory cytokines. Elucidating the role of amphiregulin on the generation, interactions, and balance among T-cell subsets will advance the understanding of psoriasis pathogenesis.
Mutations in the pancreatic secretory enzymes CPA1 and CPB1 are associated with pancreatic cancer
Tamura, Koji , Hata, Tatsuo , Suenaga, Masaya, Abe, Toshiya , Macgregor-Das, Anne , Borges, Michael , Wolfgang, Christopher L. , Weiss, Matthew J. , He, Jin , Petersen, Gloria M. , Gallinger, Steven , Rustgi, Anil K. , Zogopoulos, George , Potash, James B. , McCombie, W. Richard , Zandi, Peter P. , Pirooznia, Mehdi , Kramer, Melissa , Parla, Jennifer, Eshleman, James R. , Roberts, Nicholas J. , Hruban, Ralph H. , Pirooznia, Mehdi , Tamura, Koji , Yu, Jun , Shindo, Koji , Canto, Marcia Irene , Syngal, Sapna , Brand, Randall E. , Olson, Sara H. , Stoffel, Elena M. , Coté, Michele L. , Goes, Fernando , Klein, Alison P. , Goggins, Michael

Proceedings of the National Academy of Sciences | April 19, 2018 | Volume: 115 | Issue: 18 | Pages: 4767-4772

10.1073/pnas.1720588115 | PMID 29669919 Get It

Significance Much of the inherited susceptibility to pancreatic cancer remains unexplained. Germline variants that cause protein misfolding and impaired secretion of pancreatic enzymes such as CPA1 (encoding carboxypeptidase A1) can cause pancreatic acinar cell endoplasmic reticulum (ER) stress. We investigated the hypothesis that pancreatic cancer could arise from germline variants in genes encoding pancreatic secretory enzymes that induce pancreatic acinar cell stress. We find ∼1% of 1,579 patients with pancreatic cancer vs. 1 of 2,012 controls have germline variants in the genes encoding CPA1 and CPB1 (carboxypeptidase B1) that impair secretion of its protein product and induce ER stress. These findings implicate pancreatic acinar cell stress as a mechanism of pancreatic cancer susceptibility.