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613 citation(s) found for "Qi, Ying".

Angle-Free Ultrasound-assisted Technique for Difficult Lumbar Puncture to Enhance Precision and Success in Complex Spinal Anatomy: A Case Series with Longitudinal Learning Curve Analysis
Wang, Xuan, Luo, Yijun , Huang, Chanyan, Lu, Xiaolin , Diedrich, Daniel A. , Xiao, Ying , Wang, Xuan, Zhang, Xiaolong, Huang, Chanyan , Xiao, Ying

No container title available | March 20, 2026 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.21203/rs.3.rs-8901033/v1 Get It

Abstract Background Lumbar puncture is a routinely performed procedure, yet it presents significant challenges in patients with abnormal spinal anatomy, such as severe scoliosis or obesity. Conventional ultrasound-assisted neuraxial techniques, while superior to landmark-based methods, are constrained by two fundamental limitations: inaccurate projection of the probe’s geometric center onto the skin when the probe is tilted or rocked, and the difficulty of consistently replicating the exact probe angle during needle insertion. These limitations contribute to multiple needle passes, prolonged procedure time, and increased patient discomfort and complication risk. To address these issues, we developed a novel angle-free ultrasound-assisted technique designed to eliminate the need for replicating probe angulation during needle insertion. Case presentation: This angle-free approach was utilized for serial lumbar punctures in two patients with spinal muscular atrophy requiring repeated intrathecal nusinersen administration. Both patients presented with extreme anatomical complexity, including high body mass index (30 and 35.1 kg/m²) and severe scoliosis (Cobb angles 90° and 83°). The technique follows a three-step protocol: (1) Preprocedural imaging to select the optimal interlaminar space; (2) Ultrasound-guided postural adjustment until the probe could be held perpendicular to the bed edge and parallel to the floor while maintaining target visualization; (3) Needle insertion along this orthogonal trajectory. All 22 procedures (11 per patient) were completed successfully without persistent neurological complications. Procedural outcomes demonstrated a first-attempt success rate of 81.8% (Case 1) and 100% (Case 2), with first-pass success rates of 45.5% and 54.5%, respectively. Longitudinal analysis across sequential procedures revealed a consistent reduction in both the number of needle passes and needling time, reflecting a favorable learning curve. Conclusions The angle-free ultrasound-assisted neuraxial technique offers a valuable alternative for patients with complex spinal anatomy. By using real-time postural adjustments to achieve a needle trajectory, it enhances procedural precision and eliminates the technical hurdle of replicating probe angulation. The structured "4P" framework (Planning, Positioning, Perpendicular, Parallel) offers a practical guide for clinical adoption. The observed learning curve suggests that clinicians can readily acquire and apply this technique to manage such challenging cases.
Clinical Utility of Copy Number Abnormality Analysis in the Evaluation of Melanocytic Lesions for Diagnosis and Prognosis: An Evidence-Based Review from the Cancer Genomics Consortium Working Group for Melanocytic Lesions
Barron, Cynthia Reyes , Alomari, Ahmed K. , Deak, Kristen , Golem, Shivani , Williams, Eli S. , Aypar, Umut , Zou, Ying S., Wei, Lei , Chaubey, Alka , Kolhe, Ravindra , Love, Tanzy M., Iqbal, M. Anwar, Zou, Ying , Reyes Barron, Cynthia , Geiersbach, Katherine B. , Deak, Kristen L , Aypar, Umut , Zou, Ying S , Wei, Lei , Chaubey, Alka , Kolhe, Ravindra , Love, Tanzy M , Sahajpal, Nikhil , Love, Tanzy , Prokop, Larry J. , Iqbal, M. Anwar

Genes | March 18, 2026 | Volume: 17 | Issue: 3 | Pages: 331

10.3390/genes17030331 | PMID 41898865 Get It

Background/Objective: Although most melanocytic lesions are diagnosed as benign or malignant by histopathologic evaluation, with or without the aid of immunohistochemistry, diagnosis may remain uncertain in a minority of cases. Assessment of copy number abnormalities (CNAs) may provide sufficient additional evidence to favor either a benign or malignant diagnosis in both pediatric and adult cases and in melanocytic lesions of various subtypes, including Spitzoid, mucosal, and acral. CNAs are common in melanomas, while they are rare, with few exceptions, in benign lesions. Detection of CNAs by fluorescence in situ hybridization (FISH) and chromosomal microarray (CMA) has been well established for melanocytic lesions, with advantages and disadvantages for each. The objective of this meta-analysis was to evaluate the utility of CNA testing for the diagnosis of melanoma, across subtypes, when a lesion remains ambiguous after histopathologic and immunohistochemical assessment. In addition, the utility of CNAs to determine prognosis in established diagnoses of melanoma was also evaluated. Methods: The Cancer Genomics Consortium Working Group for Melanocytic Lesions reviewed published data from January 1998 through September 2022 of CNAs in melanocytic lesions detected by either FISH or CMA and conducted a meta-analysis of the findings. Results: Specific abnormalities common in primary cutaneous melanomas of various subtypes and uveal melanomas were enumerated. Differences in CNAs found in primary versus metastatic lesions were also determined, and published evidence for prognosis was summarized. Conclusions: The working group established evidence-based recommendations for the use of CNA testing for evaluation of ambiguous melanocytic lesions.
Effects of care partner type on outcomes from a multicomponent behavioral intervention for mild cognitive impairment
Xie, Zhigang , Aghamoosa, Stephanie , Ying, Gelan , Shandera‐Ochsner, Anne L., Smith, G.J.W., Santos, Octavio, Grant, Jeremy , Shen, Chen, Carriere, Lucille, Chandler, Melanie , Locke, Dona Ec, Shandera-Ochsner, Anne, Chandler, Melanie J, Locke, Dona E.C. , Wit, Liselotte De , Boots, Elizabeth A.

Alzheimer's & Dementia: Translational Research & Clinical Interventions | March 8, 2026 | Volume: 12 | Issue: 1 | Pages: No page available

10.1002/trc2.70222 | PMID 41756738 Get It

Abstract INTRODUCTION Multicomponent non‐pharmacological interventions, such as the HABIT Healthy Action to Benefit Independence & Thinking® program, have shown promise for improving emotional well‐being, functioning, and self‐efficacy in both people with mild cognitive impairment (pwMCI) and their care partners. However, limited research has examined whether outcomes differ based on type of care partner who co‐enrolls with the pwMCI. METHODS We analyzed data from 875 pwMCI−care partner dyads who completed the HABIT program. Multivariate linear mixed‐effects regression models evaluated changes from baseline in outcomes by care partner type (spouse vs. non‐spouse) at post‐intervention, 6‐months, and 12‐ months. RESULTS At post‐intervention, pwMCI with spousal care partners demonstrated significant improvements across all outcomes from baseline, whereas those with non‐spousal partners improved in five out of seven outcomes. Across subsequent follow‐ups, pwMCI with spousal care partners showed sustained mean reductions in anxiety (post‐intervention: −2.0; 12‐month: −0.9) and increased compliance (post‐intervention: 5.7; 12‐month: 0.9). Everyday functioning in memory (post‐intervention: −0.9; 12‐months: 1.8) and executive functioning (post‐intervention: −0.7; 12‐months: 4.8) improved at post‐intervention but declined thereafter. Spousal care partners reported reduced anxiety (−1.2) and depression (−1.3) at post‐intervention, but by 12‐months they experienced increased burden, anxiety, and depression relative to baseline. Non‐spousal pwMCI–care partner dyads did not show significant change at 6 or 12‐months. DISCUSSION The HABIT intervention may have more favorable outcomes for pwMCI and care partners in spousal compared to non‐spousal dyads. These findings highlight the potential impact of care partner characteristics on both immediate and long‐term response to behavioral interventions for MCI. Highlights At post‐intervention, people with mild cognitive impairment (pwMCI) with spousal care partners showed significant improvements across all outcomes, while those with non‐spousal partners improved in five of seven outcomes. Gains attenuated over time for both spousal and non‐spousal dyads Spousal care partners reported reduced anxiety and depression at post‐intervention, but by 12 months they experienced increased burden, anxiety, and depression relative to baseline. Non‐spousal pwMCI–care partner dyads did not show significant change at 6 or 12 months.
Intraductal digestive enzyme accumulation drives lethal hemorrhagic necrotizing pancreatitis and enables therapeutic intervention
Ji, Baoan , Wang, J., Wang, Lingxiang , Wang, Bin, Wan, Jianhua, He, Gordon, Jahan-mihan, Yasmin, Li, Audrey, Wang, Y., Feng, Donfeng, Clark, Justin J., Faheem, Muhammad, Wang, Oliver H., Zhu, Zhu, Tu, Guangping, Yu, Xiao, Waldron, Richard T. , Lugea, Aurelia, Pandol, Stephen, Edenfield, Brandy , zhang, lizhi, Bi, Yan, Wang, Jiale , Wang, Jiale , Wang, Yuxi, Hu, Jie , Pandol, Stephen J , Wang, Ying , Waldron, Richard T , Liu, Yang , Wan, Jianhua , Jahan‐mihan, Yasmin , Hu, Jie , Clark, Justin, Pandol, Stephen J. , Wang, Ying

No container title available | March 6, 2026 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.21203/rs.3.rs-7861443/v1 | PMID 41836514 Get It

Abstract Background: Hemorrhagic necrotizing pancreatitis (HNP) is a highly lethal form of pancreatitis that lacks mechanism-based therapy. Intra-acinar enzyme activation is fundamental to pancreatitis initiation, yet it does not explain why only a subset of episodes progress to catastrophic hemorrhagic necrosis. Objective: To identify determinants of progression to lethal HNP and test a mechanism-based preventive intervention. Design: Using humanized trypsinogen mouse models and secretagogue regimens, we compared high-dose cerulein with low/moderate-dose cerulein and bombesin. We quantified pancreatic protease activity, performed blinded histopathologic scoring, assessed hemorrhage/vascular disruption, and evaluated enzyme localization and ductal injury by PRSS1 immunostaining. De-identified human pancreatic histology from HNP were examined. We tested a repurposed strategy using clinically approved agents for other indications: secretin to stimulate ductal fluid secretion and isosorbide mononitrate (ISMN) to promote ductal outflow via sphincter of Oddi relaxation. Results: High-dose cerulein induced robust intrapancreatic protease activation but predominantly caused edematous pancreatitis. Paradoxically, bombesin and low/moderate-dose cerulein elicited lower total pancreatic protease activity yet produced severe, frequently lethal HNP with vascular disruption and lobular ischemic necrosis. HNP was associated with intraductal enzyme accumulation and ductal injury. Secretin or ISMN alone showed limited protection, whereas combined secretin+ISMN prevented hemorrhagic necrotizing injury. Conclusion: Pancreatitis severity is determined not only by the magnitude of enzyme activation but also by where enzyme activity is exerted, implicating intraductal enzyme accumulation as a mechanistic determinant and therapeutic target in HNP. Coordinated enhancement of ductal secretion and outflow with clinically approved agents prevents HNP in vivo, supporting a translatable prevention strategy.
AI‐enhanced Centiloid quantification of amyloid PET images
Bourgeat, Pierrick , Fripp, Jurgen, Lebrat, Léo , Xia, Ying, Zisis, Georgios , Goyal, Manu S., Tosun, Duygu, Benzinger, Tammie LS., Breakspear, Michael J, Short, Cathy, Adam, Robert , Robertson, Joanne, Sperling, Reisa, O'Bryant, Sid E., Johnson, Sterling C., Jr, Clifford R. Jack, Schwarz, Christopher G., Barkhof, Frederik, Farrar, Gill , Bollack, Ariane, Collij, Lyduine E., Landau, Susan, Koeppe, Robert, Initiative, for the Alzheimer's Disease Neuroimaging, OASIS3, Team, the A4/LEARN Study, Team, The Health and Aging Brain Study (HABS‐HD) Study, WRAP, ADNI‐DOD, PISA, ADNeT, Morris, John C., Weiner, Michael W., Villemagne, Victor L., Masters, Colin L., Rowe, Christopher C., Doré, Vincent , Barkhof, Frederik , Bourgeat, Pierrick , Xia, Ying , Barkhof, Frederik , Xia, Ying , Doré, Vincent , Fripp, Jürgen , Xia, Ying, Feizpour, Azadeh , Cox, Timothy O. , Gillman, Ashley , Goyal, Manu S. , Benzinger, Tammie L.S. , LaMontagne, Pamela , Breakspear, Michael J , Lupton, Michelle K. , Short, Cathy, Sperling, Reisa Anne , O’Bryant, Sid E. , Johnson, Sterling C. , Jack, Clifford R. , Schwarz, Christopher G. , Bollack, Ariane , Collij, Lyduine , Landau, Susan , Koeppe, Robert A. , Initiative, for the Alzheimer’s Disease Neuroimaging, Morris, John C. , Weiner, Michael W. , Villemagne, Victor L. , Masters, Colin L. , Rowe, Christopher Cleon

Alzheimer's & Dementia | February 11, 2026 | Volume: 22 | Issue: 2 | Pages: No page available

10.1002/alz.71162 | PMID 41670187 Get It

Abstract INTRODUCTION The Centiloid scale is the standard for amyloid (Aβ) PET quantification in research and clinical settings. However, variability between tracers and scanners remains a challenge. METHODS This study introduces DeepSUVR, a deep learning method to correct Centiloid quantification, by penalizing implausible longitudinal trajectories during training. The model was trained using data from 2,129 participants (7,149 Aβ positron emission tomography [PET] scans) in the Australian Imaging, Biomarkers and Lifestyle Study of ageing (AIBL)/Alzheimer's Disease Neuroimaging Initiative (ADNI) and validated using 15,807 Aβ PET scans from 10,543 participants across 10 external datasets. RESULTS DeepSUVR increased correlation between tracers, and reduced variability in the Aß‐negatives. It showed significantly stronger association with cognition, visual reads, neuropathology, and increased longitudinal consistency between studies. DeepSUVR also increased the effect size for detecting small treatment related slowing of amyloid accumulation in the A4 study. DISCUSSION DeepSUVR substantially advances Aβ PET quantification, outperforming all standard approaches, which is particularly important for clinical decision making and to detect subtle or early changes in Aβ. Highlights Novel artificial intelligence (AI)‐method that penalizes biologically implausible longitudinal trajectories, enabling the model to learn standardized uptake value ratios (SUVR) correction factors without requiring longitudinal data at inference time. Improves Centiloid consistency across tracers and studies, significantly enhancing cross‐sectional and longitudinal amyloid positron emission tomography (PET) quantification. DeepSUVR‐derived Centiloids show stronger associations with cognition, visual reads, and neuropathology. Longitudinal variability is reduced three‐ to five‐fold, enabling more reliable tracking of amyloid accumulation and better detection of treatment effects. Novel reference and target masks derived from DeepSUVR replicate most of the model's performance, offering a practical alternative for integration into existing pipelines.
A Proteoform-Resolved Atlas of Human Cardiac Histones
Gao, Zhan, Clemmer, Isabella R., Chan, Hsin-Ju, Osei, Kwame, Weir, Thomas S., Fischer, Matthew S. , Gearhart, Robert, Price, Scott J., Zhu, Y., Wu, Jingshing, Zhu, Wuqiang , Zhu, Wuqiang , Gao, Zhan , Chan, Hsin‐Ju , Osei, Kwame, Rogers, Holden T. , Gearhart, Robert L., Price, Scott J., Brasier, Allan R. , Ge, Ying Ping

No container title available | February 10, 2026 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.21203/rs.3.rs-8811072/v1 | PMID 41727594 Get It

Abstract Histones variant composition and post-translational modifications (PTMs) of core and linker histones jointly orchestrate chromatin architecture and tissue-specific gene regulation. However, capturing the full complexity of the “histone code” in native human tissues remains challenging. Here we present a human cardiac histone proteoform atlas—comprising intact histone variants with combinatorial PTMs—enabled by a streamlined top‑down proteomics workflow. In a single one‑dimensional reversed‑phase liquid chromatography (LC)-mass spectrometry (MS) run, we achieve baseline separation of all four core histone families (H2A, H2B, H3, and H4) together with the linker histone H1 directly from human myocardium. Notably, this intact-protein analysis preserves the connectivity of co-occurring PTMs to individual histone molecules to reveal the combinatorial histone code, enabling proteoform‑level quantification of histone‑variant composition and PTM stoichiometry at the chromatographic scale. Targeted MS/MS directly resolves co-occurring PTM combinations and distinguishes highly homologous histone isoforms. Using this approach, we assemble the first comprehensive cardiac histone proteoform atlas and uncover previously unobserved histone proteoforms. More broadly, this top-down proteomics workflow provides a robust framework for proteoform-resolved analysis of histone variants and PTMs in complex biological systems.
Familial History of Aortic Disease Does Not Affect Outcomes of Fenestrated-Branched Endovascular Aortic Repair in Patients With Complex Aortic Aneurysms
Baghbani, Aidin , Sulzer, Titia A.L. , Mesnard, Thomas, Mendes, Bernardo C., Saqib, Naveed, Huang, Ying, Oderich, Gustavo S., Baghbani‐Oskouei, Aidin , Sulzer, Titia A L , Tenorio, Emanuel R , Huang, Ying , Oderich, Gustavo S , Savadi, Safa , Tenorio, Emanuel R. , Mésnard, Thomas , Vacirca, Andrea , Mendes, Bernardo C. , Maximus, Steven , Oderich, Gustavo S.

Journal of Endovascular Therapy | February 10, 2026 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.1177/15266028261417156 | PMID 41664301 Get It

Purpose: Familial history of aortic disease has been associated with increased risk of aneurysm-related complications after standard endovascular aortic repair. The aim of this study was to evaluate outcomes of fenestrated-branched endovascular aortic repair (FB-EVAR) for complex aortic aneurysms in patients with or without familial aortic aneurysms (FAAs). Materials and Methods: We reviewed the clinical data of consecutive patients enrolled in a prospective non-randomized study to investigate outcomes after FB-EVAR for treatment of complex aortic aneurysms between 2013 and 2022. Familial aortic aneurysm was defined as occurrence of an aortic aneurysm or dissections in a first- or second-degree relative and compared with patients with sporadic aortic aneurysms (SAAs). Endpoints included procedural metrics, 30-day mortality and major adverse events (MAEs), mid-term patient survival, freedom from reintervention and endoleak, and aneurysm sac shrinkage. Results: There were 499 patients treated with FB-EVAR (70% males, mean age was 74±7.7 years) including 66 (13%) patients with FAAs and 434 (87%) with SAAs. Both groups had similar demographics, clinical characteristics, aneurysm extent, and prior history of aortic dissection or aortic repair. Patients with FAAs had longer fluoroscopy time (82 vs 71 minutes) and radiation exposure (1856 vs 1213 mGy; each p<0.05), with no difference in technical success (FAA, 94% vs SAA, 97%; p=0.51). There was no difference in 30-day mortality (1.5% vs 0.9%; p=1.00) and MAEs (23% vs 18%; p=0.44) among patients with FAA and SAA, respectively. Median follow-up was 28 months. At 3 years, patient survival, freedom from secondary interventions, and cumulative incidence of sac shrinkage were 76±2.5%, 74±2.5%, and 32±2.6% for all patients, respectively, with no difference between FAA and SAA groups. Conclusion: Fenestrated-branched endovascular aortic repair was performed with high technical success, low mortality, and low incidence of MAEs regardless of the presence of FAA. There was no difference in mid-term patient survival, secondary interventions, and sac changes among patients with or without family history of aortic disease. Clinical Impact This study demonstrates that fenestrated-branched endovascular aortic repair (FB-EVAR) can be performed with high technical success and comparable early and mid-term outcomes in patients with or without a familial history of aortic aneurysm, after exclusion of genetically triggered aortic diseases. These findings challenge the assumption that family history alone should preclude complex endovascular repair. Clinically, this supports broader use of FB-EVAR in carefully selected patients with familial aortic disease, emphasizing anatomical suitability rather than pedigree alone. The innovation lies in validating FB-EVAR as a safe alternative to open repair for this understudied population, informing patient selection, counseling, and surveillance strategies.
Shared Pathogenic Pathways Between REM Sleep Behavior Disorder and Neurodegenerative and Psychiatric Disorders
Zhang, Zhao, Somerville, Emma N. , Fang, Zih‐Hua , Liu, Lang, Asayesh, Farnaz , Ahmad, Jamil, Amiri, Saeid , Teferra, Meron, Dodet, P., Arnulf, Isabelle, Hu, Michele T.M., Desautels, A., Dauvilliers, Yves, Aktan-Süzgün, Merve , Stefani, A., Högl, Birgit, Gaig, Carles, Mayà, G., Iranzo, Alex, Serradell, Mònica , Valente, Mariarosaria, Dusek, P., Sommerauer, Michael , Röttgen, Sinah, Figorilli, M., Puligheddu, Monica, Mollenhauer, Brit, Trenkwalder, Claudia, Sixel-Doring, Friederike, Plazzi, G., Antelmi, E., Terzaghi, Michele, Fiamingo, Giuseppe , Ferini-Strambi, Luigi, Kulcsarova, Kristina, Bušková, J., Abril, Beatriz, Orso, B., Arnaldi, D., Boeve, Bradley F., Ju, Yo‐El S. , Ross, Owen A., Wu, Shih-Ying, Lee, Jonghun , Prilutsky, Daria, Blauwendraat, Cornelis, Leonard, Hampton, Postuma, Ronald B., Rouleau, Guy A., Gan-Or, Ziv, Arnulf, Isabelle , Hu, Michele T M , Desautels, Alex , Dauvilliers, Yves , Ibrahim, Abubaker , Stefani, Ambra , Högl, Birgit , Montini, Angelica , Maya, Gerard , Serradell, Monica , Gigli, Gian Luigi , Valente, Mariarosaria , Janes, Francesco , Sonka, Karel , Kemlink, David , Dušek, Petr , Figorilli, Michela , Puligheddu, Monica , Mollenhauer, Brit , Trenkwalder, Claudia , Sixel-Doring, Friederike , Plazzi, Giuseppe , Biscarini, Francesco , Antelmi, Elena , Cochen De Cock, Valérie , Terzaghi, Michele , Fiamingo, Giuseppe , Heidbreder, Anna , Ferini-Strambi, Luigi , Ostrozovicova, Miriam , Skorvanek, Matej , Kulcsarova, Kristina , Buskova, Jitka , Orso, Beatrice , Mattioli, Pietro , Arnaldi, Dario , Boeve, Brad , Ross, Owen A , Blauwendraat, Cornelis , Postuma, Ronald B , Rouleau, Guy Armand , Gan-Or, Ziv , Zhang, Zhao , Liu, Lang , Ahmad, Jamil, Teferra, Meron , Dodet, Pauline , Arnulf, Isabelle , Désautels, Alex , Dauvilliers, Yves , Ibrahim, Abubaker , Stefani, Ambra , Högl, Birgit , Gaig, Carles , Mayà, Gerard , Iranzo, Álex , Serradell, Mónica , Janes, Francesco , Bernardini, Andrea , Šonka, Karel , Dušek, Petr , Röttgen, Sinah , Figorilli, Michela , Puligheddu, Monica , Mollenhauer, Brit , Trenkwalder, Claudia , Sixel‐Döring, Friederike , Biscarini, Francesco , Antelmi, Elena, Heidbreder, Anna , Kulcsárová, Kristína , Mattioli, Pietro , Arnaldi, Dario , Boeve, Bradley F. , Blauwendraat, Cornelis , Postuma, Ronald B. , Gan‐Or, Ziv

No container title available | February 6, 2026 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.64898/2026.02.05.26345599 | PMID 41674635 Get It

Abstract Isolated/idiopathic rapid-eye-movement (REM)-Sleep Behavior Disorder (iRBD) is characterized by dream enactment behaviors associated with loss of REM atonia. iRBD is in most cases a prodromal synucleinopathy, and emerging evidence suggests associations between RBD and other neurological and psychiatric conditions. In this study, we performed pathway-based polygenic risk score (PRS) and rare variant burden analyses to examine these potential associations. Pathway-specific PRS were constructed from genome-wide association study summary statistics of five neurodegenerative and seven psychiatric traits across 10 biologically relevant pathway categories, including a total of 279 pathways, in 1,573 iRBD cases and 16,022 controls from the International RBD Study Group and UK Biobank. Rare variant burden tests were performed in 1,264 iRBD cases and 2,581 controls. We identified multiple potential pathways indicating shared polygenic risk between RBD and both neurodegenerative and psychiatric disorders. Lewy body diseases and post-traumatic stress disorder had the most shared polygenic risk pathways in neurological and psychiatric disorders, respectively. Two pathways, the serotonin transport pathway and the chaperone-mediated autophagy pathway, showed the strongest association with iRBD, and gene-based rare variants analyses revealed five genes associated with iRBD: GBA1 , PLEKHM1 , LRP2 , P2RX1 , and HAP1. Subsequent analysis of these genes in Parkinson’s disease and dementia with Lewy bodies replicated several associations. Together, these findings provide novel insights into the shared genetic architecture underlying iRBD, neurodegenerative disorders, and psychiatric traits, with implications for early identification and mechanistic understanding.
Epigenetic Regulation of Higher-Order Chromatin Structure (HOCS) and Its Implication in Human Diseases
Ladel, Luisa, Sailo, Bethsebie, Das, Paromita, Tan, Wan Ying , Chhoda, Ankit , Tang, Haoyu, Ang-Olson, Olivia, He, Linda, John, Nithyla, Kratz, Jeremy D. , Sharma, Anup , Ahuja, Nita, Ang-Olson, Olivia , Kratz, Jeremy D , Lin, Ethan Samuel , Tang, Haoyu , Ahuja, Nita

Cancers | February 2, 2026 | Volume: 18 | Issue: 3 | Pages: 483

10.3390/cancers18030483 | PMID 41681953 Get It

Higher-order chromatin structures (HOCS) are fundamental to genome organization, gene regulation, and cellular homeostasis. This review examines the epigenetic mechanisms shaping HOCS, including DNA methylation, histone modifications, chromatin remodeling, and RNA-based regulatory processes. We also discuss the role of architectural proteins in maintaining chromatin topology while allowing dynamic changes to chromatin structure, thereby influencing gene expression. Growing evidence indicates that disruptions in HOCS contribute to a diverse array of human diseases, including cancer, aging-related disorders, and congenital abnormalities, primarily through aberrant gene regulation. We further discuss the concept of distinct genomic areas, in which specific chromatin regions orchestrate three-dimensional (3D) genome dynamics, positioning them as potential biomarkers and therapeutic targets. By emphasizing chromatin architecture on a global scale rather than at the level of individual genes, this review underscores its emerging relevance to precision medicine. Finally, we synthesize current technical advances, outline future directions for leveraging chromatin topology in disease diagnosis and treatment, and highlight key biological insights to reshape our understanding of genome function.