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613 citation(s) found for "Qi, Ying".

Predicting missing biomarker data in a longitudinal study of Alzheimer disease
Lo, Raymond Y. , Jagust, William J. , Aisen, Paul , Gamst, Anthony, Soares, Holly , Montine, Tom, Thomas, Ronald G. , Walter, Sarah , Felmlee, Joel P. , Schuff, Norbert, Alexander, Gene, DeCarli, Charles , Bandy, Dan, Korecka, Magdalena , Crawford, Karen , Neu, Scott, Kornak, John , Buckholtz, Neil, Dolen, Sara, Schneider, Lon S. , Pawluczyk, Sonia, Spann, Bryan M., Brewer, James, Vanderswag, Helen, Heidebrink, Judith L. , Petersen, Ronald , Johnson, Kris , Doody, Rachelle S., Villanueva‐Meyer, Javier , Chowdhury, Munir , Bell, Karen L. , Mintun, Mark A., Schneider, Stacy, Marson, Daniel , Griffith, Randall, Grossman, Hillel, Marzloff, George, Toledo-Morrell, Leylade, Duara, Ranjan , Varón, Daniel , Roberts, Peggy, Albert, Marilyn S. , Pedroso, Julia, Toroney, Jaimie, Santi, Susan M De, Doraiswamy, P. Murali , Petrella, Jeffrey R. , Aiello, Marilyn, Clark, Christopher M. , Pham, Cassie, Nuñez, Jessica, Smith, Charles D., Given, Curtis A., Hardy, Peter , Oakley, MaryAnn, Simpson, Donna M., Ismail, M. Saleem , Brand, Connie, Richard, Jennifer, Mulnard, Ruth A., Thai, Gaby , Mc-Adams-Ortiz, Catherine, Martin-Cook, Kristen, Devous, Michael D. , Cellar, Janet S., Anderson, Heather S., Laubinger, Mary M., Bartzokis, George, Lu, Po H. , MBBCH, Neill R Graff-Radford, Parfitt, Francine, Farlow, Martin R. , Herring, Scott, Hake, Ann Marie , Dyck, Christopher H. van , MacAvoy, Martha G., Benincasa, Amanda L., Chertkow, Howard, Bergman, Howard , Hosein, Chris, Graham, Simon J. , Caldwell, Curtis, Hsiung, Ging‐Yuek Robin , Assaly, Michele, Kertesz, Andrew, Rogers, John, Trost, Dick, Bernick, Charles , Munic, Donna, Wu, Chuang‐Kuo, Johnson, Nancy , Mesulam, Marsel, Sadowsky, Carl, Villena, Teresa, Turner, Scott, Johnson, Kathleen, Behan, Kelly E., Johnson, Keith A. , Rosen, Allyson , Tinklenberg, Jared, Ashford, Wes, Sabbagh, Marwan N. , Connor, Donald J., Jacobson, Sandra A. , Jayam‐Trouth, Annapurni , Lerner, Alan J. , Hudson, Leon, Ogrocki, Paula, Fletcher, Evan, Kittur, Smita, Mirje, Seema, Borrie, Michael, Lee, T‐Y, Bartha, Dr Rob, Asthana, Sanjay , Carlsson, Cynthia M., Potkin, Steven, Preda, Adrian , Tariot, Pierre N. , Fleisher, Adam , Reeder, Stephanie, Bates, Vernice, Capote, Horacio, Rainka, Michelle, Hendin, Barry , Kataki, Maria , Zimmerman, Earl A. , Celmins, Dzintra, Brown, Alice D., Marenberg, Marjorie E., Rovner, Barry W. , Anderson, Karen, Santulli, Robert B. , Englert, Jessica, Williamson, Jeff D. , Watkins, Franklin, Ott, Brian R. , Cohen, Ronald, Salloway, Stephen , Malloy, Paul, Correia, Stephen , Rosen, Howard J. , Mintzer, Jacobo , Jack, Clifford R. , Toga, Arthur W. , Beckett, Laurel , Green, Robert C. , Donohue, Michael , Dale, Anders M. , Bernstein, Matt A. , Fox, Nick C. , Thompson, Paul M. , Chen, Kewei , Morris, John C. , Lee, Virginia M.‐Y. , Harvey, Danielle , Saykin, Andrew J. , Foroud, Tatiana , Potkin, Steven G. , Shen, Li , Kaye, Jeffrey , Quinn, Joseph F. , Lord, Joanne L. , Stern, Yaakov , Honig, Lawrence S. , Clark, David , Tang, Cheuk Ying , Shah, Raj C. , Duara, Ranjan , Rusinek, Henry , Leon, Mony J. de , López, Oscar L. , Diaz‐Arrastia, Ramon , Levey, Allan I. , Lah, James J. , Burns, Jeffrey M. , Silverman, Daniel H.S. , Johnson, Heather K. , Black, Sandra E. , Feldman, Howard , Martínez, Walter Fabián , Sperling, Reisa Anne , Rentz, Dorene M. , Killiany, Ronald , Norbash, Alexander , Nair, Anil K. , Obisesan, Thomas O. , Wang, Paul C. , Carmichael, Owen , Johnson, Sterling C. , Nguyen, Dana R. , Reeder, Stephanie, Scharre, Douglas W. , Gandy, Sam , Pearlson, Godfrey D. , Sink, Kaycee M. , Miller, Bruce L. , Preda, Adrian , Hsiung, Gink-Yuek

Neurology | April 5, 2012 | Volume: 78 | Issue: 18 | Pages: 1376-1382

10.1212/wnl.0b013e318253d5b3 | PMID 22491869 Get It

Vaccines Targeting Tumor Blood Vessel Antigens Promote CD8+ T Cell-Dependent Tumor Eradication or Dormancy in HLA-A2 Transgenic Mice
Zhao, Xi, Komita, Hideo, Taylor, Jennifer L. , Chi, Nina, Lowe, Devin B. , Cohen, Peter A. , Storkus, Walter J. , Bose, Anamika , Okada, Hideho , Cao, Ying , Mukhopadhyay, Debabrata

The Journal of Immunology | January 14, 2012 | Volume: 188 | Issue: 4 | Pages: 1782-1788

10.4049/jimmunol.1101644 | PMID 22246626 Get It

Abstract We have recently shown that effective cytokine gene therapy of solid tumors in HLA-A2 transgenic (HHD) mice lacking murine MHC class I molecule expression results in the generation of HLA-A2–restricted CD8+ T effector cells selectively recognizing tumor blood vessel-associated pericytes and/or vascular endothelial cells. Using an HHD model in which HLA-A2neg tumor (MC38 colon carcinoma or B16 melanoma) cells are not recognized by the CD8+ T cell repertoire, we now show that vaccines on the basis of tumor-associated blood vessel Ags (TBVA) elicit protective Tc1-dependent immunity capable of mediating tumor regression or extending overall survival. Vaccine efficacy was not observed if (HLA-A2neg) wild-type C57BL/6 mice were instead used as recipient animals. In the HHD model, effective vaccination resulted in profound infiltration of tumor lesions by CD8+ (but not CD4+) T cells, in a coordinate reduction of CD31+ blood vessels in the tumor microenvironment, and in the “spreading” of CD8+ T cell responses to alternate TBVA that were not intrinsic to the vaccine. Protective Tc1-mediated immunity was durable and directly recognized pericytes and/or vascular endothelial cells flow-sorted from tumor tissue but not from tumor-uninvolved normal kidneys harvested from these same animals. Strikingly, the depletion of CD8+, but not CD4+, T cells at late time points after effective therapy frequently resulted in the recurrence of disease at the site of the regressed primary lesion. This suggests that the vaccine-induced anti-TBVA T cell repertoire can mediate the clinically preferred outcomes of either effectively eradicating tumors or policing a state of (occult) tumor dormancy.
The Selaginella Genome Identifies Genetic Changes Associated with the Evolution of Vascular Plants
Banks, Jo Ann , Nishiyama, Tomoaki , Hasebe, Mitsuyasu , Bowman, John L. , Gribskov, Michael , dePamphilis, Claude W. , Albert, Victor A. , Aono, Naoki, Aoyama, Tsuyoshi , Ambrose, Barbara A. , Ashton, Neil W., Axtell, Michael J. , Barker, Elizabeth I. , Bonawitz, Nicholas D. , Chapple, Clint , Cheng, Chaoyang , Corrêa, Luiz Gustavo Guedes, Dacre, Michael , DeBarry, Jeremy D. , Drèyer, Ingo , Engstrom, Eric M., Estelle, Mark , Feng, Liang , Finet, Cédric , Floyd, Sandra K., Gramzow, Lydia , Harholt, Jesper , Hattori, Mitsuru , Heyl, Alexander , Hirai, Tadayoshi , Hiwatashi, Yuji , Ishikawa, Masaki , Iwata, Mineko, Karol, Kenneth G. , Koehler, Barbara, Kolukisaoglu, Uener, Kubo, Minoru , Kurata, Tetsuya , Lalonde, Sylvie, Li, Kejie , Litt, Amy , Manning, Gerard , Michael, Todd P. , Miyazaki, Saori , Morinaga, Shin‐Ichi, Murata, Takashi, Nelson, David R. , Obara, Mari, Oguri, Yasuko, Olmstead, Richard G. , Onodera, Naoko T., Petersen, Bent Larsen , Pils, Birgit, Prigge, Michael J. , Riaño‐Pachón, Diego Mauricio , Scheller, Henrik Vibe , Schulz, Burkhard , Schulz, Christian , Shakirov, Eugene V. , Shibagaki, Nakako, Shippen, Dorothy E. , Sørensen, Iben , Sotooka, Ryo, Sugimoto, Nagisa , Sugita, Mamoru , Sumikawa, Naomi, Tanurdžić, Miloš , Theißen, Günter, Ulvskov, Peter , Wakazuki, Sachiko, Weng, Jing‐Ke , Willats, William G. T. , Wipf, Daniel , Wolf, Paul G. , Yang, Lixing , Zimmer, Andreas , Zhu, Qihui , Mitros, Therese , Hellsten, Uffe, Loqué, Dominique , Otillar, Robert, Salamov, Asaf, Shapiro, Harris , Lindquist, Erika , Lucas, Susan , Rokhsar, Daniel S. , Grigoriev, Igor V. , Ashton, Neil W., Barker, Michael S. , Bennetzen, Jeffrey L. , Eliáš, Marek , Frommer, Wolf Bernd , Fujita, Tomomichi , Gutensohn, Michael , Li, Ying , Lyons, Eric H. , Maruyama, Takeshi , Mikami, Koji , Murata, Takashi , Mueller‐Roeber, Bernd , Oguri, Yasuko, Rensing, Stefan Andreas , Roberts, Alison W. , Sato, Yoshikatsu , Shinohara, Naoki , Schmutz, Jeremy

Science | May 5, 2011 | Volume: 332 | Issue: 6032 | Pages: 960-963

10.1126/science.1203810 | PMID 21551031 Get It

The genome sequence of a lycophyte hints at ancient evolutionary transitions.
A CK2-dependent mechanism for activation of the JAK-STAT signaling pathway
Zheng, Ying , Qin, Hongwei , Frank, Stuart J. , Deng, Luqin, Litchfield, David W. , Tefferi, Ayalew , Pardanani, Animesh , Lin, Fang‐Tsyr , Li, Jingzhi , Sha, Bingdong , Benveniste, Etty

Blood | April 29, 2011 | Volume: 118 | Issue: 1 | Pages: 156-166

10.1182/blood-2010-01-266320 | PMID 21527517 Get It

AbstractJAK-STAT signaling is involved in the regulation of cell survival, proliferation, and differentiation. JAK tyrosine kinases can be transiently activated by cytokines or growth factors in normal cells, whereas they become constitutively activated as a result of mutations that affect their function in tumors. Specifically, the JAK2V617F mutation is present in the majority of patients with myeloproliferative disorders (MPDs) and is implicated in the pathogenesis of these diseases. In the present study, we report that the kinase CK2 is a novel interaction partner of JAKs and is essential for JAK-STAT activation. We demonstrate that cytokine-induced activation of JAKs and STATs and the expression of suppressor of cytokine signaling 3 (SOCS-3), a downstream target, are inhibited by CK2 small interfering RNAs or pharmacologic inhibitors. Endogenous CK2 is associated with JAK2 and JAK1 and phosphorylates JAK2 in vitro. To extend these findings, we demonstrate that CK2 interacts with JAK2V617F and that CK2 inhibitors suppress JAK2V617F autophosphorylation and downstream signaling in HEL92.1.7 cells (HEL) and primary cells from polycythemia vera (PV) patients. Furthermore, CK2 inhibitors potently induce apoptosis of HEL cells and PV cells. Our data provide evidence for novel cross-talk between CK2 and JAK-STAT signaling, with implications for therapeutic intervention in JAK2V617F-positive MPDs.
Cardiac Sympathetic Reserve and Response to Cardiac Resynchronization Therapy
Cha, Yong‐Mei , Dong, Ying-Xue, Kemp, Bradley J. , Oh, Jae K. , Miyazaki, Chinami , Hayes, David L. , Rea, Robert F., Asirvatham, Samuel J. , Webster, Tracy L., Dalzell, Connie, Hodge, David O. , Herges, Regina M., Yong, Yan-zhong, Zhang, Yanhua, Chen, Peng‐Sheng , Chareonthaitawee, Panithaya , Zhang, Yanhua, Asirvatham, Samuel J

Circulation: Heart Failure | March 19, 2011 | Volume: 4 | Issue: 3 | Pages: 339-344

10.1161/circheartfailure.110.959858 | PMID 21421772 Get It

Background— The objective of the present study was to investigate the effect of cardiac resynchronization therapy (CRT) on cardiac autonomic function. Methods and Results— This prospective study included 45 consecutive patients with heart failure who received CRT devices with defibrillator and 20 age-matched, healthy control subjects. At baseline and 3 months and 6 months after CRT, we assessed New York Heart Association (NYHA) class, 6-minute walk distance, plasma sympathetic biomarker nerve growth factor, echocardiography, heart rate variability and cardiac presynaptic sympathetic function determined by iodine 123 metaiodobenzylguanidine scintigraphy. After CRT, NYHA class improved by 1 class ( P <0.001), and left ventricular ejection fraction increased by 8% ( P <0.001). Along with improvement in the standard deviation of all normal-to-normal R-R intervals (85.63±31.66 ms versus 114.79±38.99 ms; P =0.004) and the standard deviation of the averaged normal-to-normal R-R intervals (82.62±23.03 ms versus 100.50±34.87 ms; P =0.004), the delayed heart/mediastinum (H/M) ratio increased (1.82 [0.58] versus 1.97 [0.59]; P =0.03), whereas the mean (SD) H/M washout rate was reduced (48% [19%] versus 37% [22%]; P =0.01). Twenty-two of 45 study patients responded to CRT, with a reduction of left ventricular end-systolic volume index >15%. Compared with nonresponders, responders had a higher delayed H/M ratio (2.11 versus 1.48; P =0.003) and lower H/M washout rate (37% versus 62%; P =0.003) at baseline. Conclusions— CRT improved sympathetic function. Cardiac sympathetic reserve may be a marker for the reversibility of failing myocardial function.
Abstract 2318: Induction of Rac1b by MMP-3 causes lung tumors by activating EMT
Zhang, Ying , Miller, Erin , Stallings‐Mann, Melody , Radisky, Derek C.

Cancer Research | February 25, 2011 | Volume: 70 | Issue: 8_Supplement | Pages: 2318-2318

10.1158/1538-7445.am10-2318 Get It

Abstract During development, epithelial cells acquire mesenchymal characteristics through a process known as epithelial-mesenchymal transition (EMT). Substantial evidence now exists that EMT-related processes play a major role in tumor progression. EMT is a focus of interest in lung cancer as loss of E-cadherin expression confers increased resistance to several types of chemotherapy. In previous studies, we found that matrix metalloproteinase-3 (MMP3) induced EMT in mouse mammary epithelial cells through induction of Rac1b, an alternatively spliced isoform of Rac1. We now show that exposure to MMPs stimulates Rac1b and induction of EMT markers in human lung cancer cell lines, and that knockdown of Rac1b blocks MMP induced EMT. We also show that Rac1b expression levels in human lung tumor biopsies is predictive of patient outcome, and that Rac1b and MMP expression levels are correlated in these samples, suggesting a direct relationship. We also describe the generation of new transgenic mouse models for which MMP3 or Rac1b is inducibly expressed in lung epithelial cells; activation of kRAS in these mice reveals that expression of MMP3 or Rac1b promotes increased tumor number, size, and progression to adenocarcinoma as well as increased expression of EMT markers vimentin, sm-actin, col1a1, and Snail. We also show that expression of Rac1b in lung epithelial cells leads to spontaneous adenocarcinoma formation. These results demonstrate a direct linkage between induction of EMT and tumor progression, implicate Rac1b as a key mediator of these processes, and demonstrate that MMPs can directly stimulate all of these events. Citation Format: {Authors}. {Abstract title} [abstract]. In: Proceedings of the 101st Annual Meeting of the American Association for Cancer Research; 2010 Apr 17-21; Washington, DC. Philadelphia (PA): AACR; Cancer Res 2010;70(8 Suppl):Abstract nr 2318.
Second brain death examination may negatively affect organ donation
Lustbader, Dana, O’Hara, David L., MacLean, Leah K. , Tajik, Waheed, Ying, Alexander W. , Berg, E.W., Goldstein, M. C., Wijdicks, Eelco F. M.

Neurology | December 16, 2010 | Volume: 76 | Issue: 2 | Pages: 119-124

10.1212/wnl.0b013e3182061b0c | PMID 21172836 Get It

RGS-GAIP–Interacting Protein Controls Breast Cancer Progression
Wang, Ling , Lau, Julie S., Patra, Chitta Ranjan , Cao, Ying , Dutta, Shamit K., Nandy, Debashis, Wang, Enfeng , Rupasinghe, Chamila N., Vohra, Pawan K., Spaller, Mark R., Bhattacharya, Santanu , Mukhopadhyay, Debabrata

Molecular Cancer Research | October 28, 2010 | Volume: 8 | Issue: 12 | Pages: 1591-1600

10.1158/1541-7786.mcr-10-0209 | PMID 21047775 Get It

Abstract Although the importance of RGS-GAIP–interacting protein (GIPC) in the biology of malignant cells is well known, the molecular mechanism of GIPC in the inhibition of tumor progression has not been identified. This study focused on elucidating the molecular role of GIPC in breast cancer progression. By using a human breast tumor specimen, an in vivo mouse model, and breast cancer cell lines, we showed for the first time that GIPC is involved in breast cancer progression through regulation of breast cancer cell proliferation, survival, and invasion. Furthermore, we found that the Akt/Mdm2/p53 axis, insulin-like growth factor-1 receptor, matrix metalloproteinase-9, and Cdc42 were downstream of GIPC signaling in breast cancer cells. Moreover, we showed that wild-type p53 reduced GIPC-induced breast cancer cell survival, whereas mutant p53 inhibited GIPC-induced cell invasion. Finally, we demonstrated that an N-myristoylated GIPC peptide (CR1023, N-myristoyl-PSQSSSEA) capable of blocking the PDZ domain of GIPC successfully inhibited MDA-MB-231 cell proliferation, survival, and further in vivo tumor growth. Taken together, these findings demonstrate the importance of GIPC in breast tumor progression, which has a potentially significant impact on the development of therapies against many common cancers expressing GIPC, including breast and renal cancer. Mol Cancer Res; 8(12); 1591–600. ©2010 AACR.
Moesin1 and Ve-cadherin are required in endothelial cells during in vivo tubulogenesis
Kaiser, Mark S., Nasevicius, Aidas, Clark, Karl J. , Wadman, Shannon A., Roberg-Perez, Sharon E., Ekker, Stephen C. , Hackett, Perry B., McGrail, Maura , Essner, Jeffrey J. , Wang, Ying , Larson, Jon D. , Ekker, Stephen C , Clark, Karl J , McGrail, Maura , Essner, Jeffrey

Development | August 24, 2010 | Volume: 137 | Issue: 18 | Pages: 3119-3128

10.1242/dev.048785 | PMID 20736288 Get It

Endothelial tubulogenesis is a crucial step in the formation of functional blood vessels during angiogenesis and vasculogenesis. Here, we use in vivo imaging of living zebrafish embryos expressing fluorescent fusion proteins of β-Actin, α-Catenin, and the ERM family member Moesin1 (Moesin a), to define a novel cord hollowing process that occurs during the initial stages of tubulogenesis in intersegmental vessels (ISVs) in the embryo. We show that the primary lumen elongates along cell junctions between at least two endothelial cells during embryonic angiogenesis. Moesin1-EGFP is enriched around structures that resemble intracellular vacuoles, which fuse with the luminal membrane during expansion of the primary lumen. Analysis of silent heart mutant embryos shows that initial lumen formation in the ISVs is not dependent on blood flow; however, stabilization of a newly formed lumen is dependent upon blood flow. Zebrafish moesin1 knockdown and cell transplantation experiments demonstrate that Moesin1 is required in the endothelial cells of the ISVs for in vivo lumen formation. Our analyses suggest that Moesin1 contributes to the maintenance of apical/basal cell polarity of the ISVs as defined by adherens junctions. Knockdown of the adherens junction protein Ve-cadherin disrupts formation of the apical membrane and lumen in a cell-autonomous manner. We suggest that Ve-cadherin and Moesin1 function to establish and maintain apical/basal polarity during multicellular lumen formation in the ISVs.
Human Airway Eosinophils Respond to Chemoattractants with Greater Eosinophil-Derived Neurotoxin Release, Adherence to Fibronectin, and Activation of the Ras–ERK Pathway When Compared with Blood Eosinophils
Bates, Mary Ellen , Sedgwick, Julie B., Liu, Lin Ying, Heuser, Rose G., Jarjour, Nizar N. , Kita, Hirohito , Bertics, Paul J., Fahy, John V. , Zhu, Yiming , Kita, H

The Journal of Immunology | May 21, 2010 | Volume: 184 | Issue: 12 | Pages: 7125-7133

10.4049/jimmunol.0900634 | PMID 20495064 Get It

Abstract Human blood eosinophils exposed ex vivo to hematopoietic cytokines (e.g., IL-5 or GM-CSF) subsequently display enhanced responsiveness to numerous chemoattractants, such as chemokines, platelet-activating factor, or FMLP, through a process known as priming. Airway eosinophils, obtained by bronchoalveolar lavage after segmental Ag challenge, also exhibit enhanced responsiveness to selected chemoattractants, suggesting that they are primed during cell trafficking from the blood to the airway. Earlier work has shown that chemoattractants stimulate greater activation of ERK1 and ERK2 following IL-5 priming in vitro, thus revealing that ERK1/ERK2 activity can be a molecular readout of priming under these circumstances. Because few studies have examined the intracellular mechanisms regulating priming as it relates to human airway eosinophils, we evaluated the responsiveness of blood and airway eosinophils to chemoattractants (FMLP, platelet-activating factor, CCL11, CCL5, CXCL8) with respect to degranulation, adherence to fibronectin, or Ras–ERK signaling cascade activation. When compared with blood eosinophils, airway eosinophils exhibited greater FMLP-stimulated eosinophil-derived neurotoxin release as well as augmented FMLP- and CCL11-stimulated adherence to fibronectin. In airway eosinophils, FMLP, CCL11, and CCL5 stimulated greater activation of Ras or ERK1/ERK2 when compared with baseline. Ras activation by FMLP in blood eosinophils was also enhanced following IL-5 priming. These studies are consistent with a model of in vivo priming of eosinophils by IL-5 or related cytokines following allergen challenge, and further demonstrate the key role of priming in the chemoattractant-stimulated responses of eosinophils. These data also demonstrate the importance of the Ras–ERK signaling pathway in the regulation of eosinophil responses to chemoattractants in the airway. Human airway eosinophils respond to several chemoattractants with increased activation of the Ras–ERK cascade, eosinophil-derived neurotoxin release, and adherence to fibronectin relative to blood eosinophils.