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601 citation(s) found for "Murphy, Seán".

IC‐P‐058: Antemortem MRI findings associated with presence of microinfarcts at autopsy
Raman, Mekala R., Preboske, Gregory M., Przybelski, Scott A. , Gunter, Jeffrey L. , Senjem, Matthew L. , Murphy, Matthew C. , Murray, Melissa E. , Petersen, Ronald, Parisi, Joseph E. , Boeve, Bradley F. , Knopman, David S. , Dickson, Dennis W. , Jack, Clifford R. , Kantarci, Kejal , Senjem, Matthew L , Murray, Melissa E

Alzheimer's & Dementia | October 9, 2013 | Volume: 9 | Issue: 4S_Part_1 | Pages: No page available

10.1016/j.jalz.2013.05.054 Get It

P1–329: MR elastography of frontotemporal dementia
Murphy, Matthew C. , Huston, John , Jones, David T. , Jack, Clifford R. , Boeve, Bradley F. , Ehman, Richard L.

Alzheimer's & Dementia | October 9, 2013 | Volume: 9 | Issue: 4S_Part_7 | Pages: No page available

10.1016/j.jalz.2013.05.555 Get It

Update on positron emission tomography for imaging of prostate cancer
Kitajima, Kazuhiro , Nathan, Mark A., Sugimura, Kazuro , Murphy, Robert C.

International Journal of Urology | September 2, 2013 | Volume: 21 | Issue: 1 | Pages: 12-23

10.1111/iju.12250 | PMID 23991644 Get It

AbstractProstate cancer is the most common non‐cutaneous malignancy among men in the Western world, and continues to be a major health problem. Imaging has recently become more important in the clinical management of prostate cancer patients, including diagnosis, staging, choice of optimal treatment strategy, treatment follow up and restaging. Positron emission tomography, a functional and molecular imaging technique, has opened a new field in clinical oncological imaging. The most common positron emission tomography radiotracer, 18F‐fluorodeoxyglucose, has been limited in imaging of prostate cancer. Recently, however, other positron emission tomography tracers, such as 11C‐acetate and 11C‐ or 18F‐choline, have shown promising results. In the present review article, we overview the potential and current use of positron emission tomography or positron emission tomography/computed tomography imaging employing the four most commonly used positron emission tomography radiotracers, 18F‐fluorodeoxyglucose, 11C‐acetate and 11C‐ or 18F‐choline, for imaging evaluation of prostate cancer.
Assessment of in vivo laser ablation using MR elastography with an inertial driver
Woodrum, David A. , Glaser, Kevin J. , Murphy, Matthew C. , Gorny, Krzysztof R. , Chen, Jun , Ehman, Richard L.

Magnetic Resonance in Medicine | July 31, 2013 | Volume: 72 | Issue: 1 | Pages: 59-67

10.1002/mrm.24891 | PMID 23904298 Get It

Smoking and prostate cancer in a multi‐ethnic sample
Murphy, Adam B. , Akereyeni, Folasade, Nyame, Yaw A. , Guy, Mignonne C. , Martin, Iman K. , Hollowell, Courtney M.P. , Walker, Kelly, Ahaghotu, Chiledum, Kittles, Rick A.

The Prostate | July 3, 2013 | Volume: 73 | Issue: 14 | Pages: 1518-1528

10.1002/pros.22699 | PMID 23824512 Get It

ABSTRACTBACKGROUNDProstate cancer (PCa) and smoking‐related morbidity disproportionately burdens African American (AA) men. Smoking is associated with high‐grade PCa and incidence, but few studies have focused on AA men. This study aims to determine the effect of tobacco‐use on odds of PCa and of high‐grade PCa in a population of predominantly AA men.METHODSThis is a cross‐sectional study evaluating smoking and PCa status in men with incident PCa and screened healthy controls. Altogether, 1,085 men (527 cases and 558 controls), age ≥ 40 years were enrolled through outpatient urology clinics in two US cities from 2001 to 2012. Validated questionnaires were used to gather clinical and socioeconomic data.RESULTSThe cases and controls were predominantly AA (79.9% and 71.3%, respectively, P = 0.01). AA men smoked more frequently (53.4% vs. 47.9%, P < 0.001) and quit less frequently than European American (EA) men (31.5% vs. 40.4%, P = 0.01). AA heavy smokers had increased odds of PCa diagnosis (OR 2.57, 95% CI 1.09, 6.10) and high‐grade cancer (OR 1.89, 95% CI 1.03, 3.48) relative to never smokers and light smokers. Among AAs, heavy smokers had lower odds of being in the low risk stratification in the National Comprehensive Cancer Network guidelines. AA former smokers had a trend for increased odds of high‐grade cancer compared to never smokers. The associations between smokings, cancer diagnosis and cancer grade did not reach statistical significance in EA men.CONCLUSIONWe found ethnic differences in smoking behavior. Heavy smoking is associated with increased odds of PCa and of higher Gleason grade in AA men. Prostate 73: 1518–1528, 2013. © 2013 Wiley Periodicals, Inc.
Analysis of Cross-Institutional Medication Description Patterns in Clinical Narratives
Sohn, Sunghwan , Clark, Cheryl, Halgrim, Scott, Murphy, Seán , Jonnalagadda, Siddhartha , Wagholikar, Kavishwar B. , Wu, Stephen , Chute, Christopher G. , Liu, Hongfang

Biomedical Informatics Insights | June 24, 2013 | Volume: 6s1 | Issue: No issue available | Pages: BII.S11634

10.4137/bii.s11634 | PMID 23847423 Get It

A large amount of medication information resides in the unstructured text found in electronic medical records, which requires advanced techniques to be properly mined. In clinical notes, medication information follows certain semantic patterns (eg, medication, dosage, frequency, and mode). Some medication descriptions contain additional word(s) between medication attributes. Therefore, it is essential to understand the semantic patterns as well as the patterns of the context interspersed among them (ie, context patterns) to effectively extract comprehensive medication information. In this paper we examined both semantic and context patterns, and compared those found in Mayo Clinic and i2b2 challenge data. We found that some variations exist between the institutions but the dominant patterns are common.
Retromer maintains basolateral distribution of the type II TGF-β receptor via the recycling endosome
Yin, Xueqian , Wilkes, Mark C. , Leof, Edward B. , Murphy, Stephen J. , Ji, Yan

Molecular Biology of the Cell | May 30, 2013 | Volume: 24 | Issue: 14 | Pages: 2285-2298

10.1091/mbc.e13-02-0093 | PMID 23720763 Get It

Transforming growth factor β (TGF-β) is critical for the development and maintenance of epithelial structures. Because receptor localization and trafficking affect the cellular and organismal response to TGF-β, the present study was designed to address how such homeostatic control is regulated. To that end, we identify a new role for the mammalian retromer complex in maintaining basolateral plasma membrane expression of the type II TGF-β receptor (TβRII). Retromer and TβRII associate in the presence or absence of TGF-β ligand. After retromer knockdown, although TβRII internalization and trafficking to a Rab5-positive compartment occur as in wild-type cells, receptor recycling is inhibited. This results in TβRII mislocalization from the basolateral to both the basolateral and apical plasma membranes independent of Golgi transit and the Rab11-positive apical recycling endosome. The data support a model in which, after initial basolateral TβRII delivery, steady-state polarized TβRII expression is maintained by retromer/TβRII binding and delivery to the common recycling endosome.
Lineage Relationship of Gleason Patterns in Gleason Score 7 Prostate Cancer
Kovtun, Irina V. , Cheville, John C. , Johnson, Sarah H. , Zarei, Shabnam , Kosari, Farhad , Sukov, William R. , Karnes, R. Jeffrey , Vasmatzis, George , Murphy, Stephen J.

Cancer Research | May 22, 2013 | Volume: 73 | Issue: 11 | Pages: 3275-3284

10.1158/0008-5472.can-12-2803 | PMID 23695551 Get It

Abstract Gleason score 7 (GS7) prostate cancer [tumors with both Gleason patterns 3 (GP3) and 4 (GP4)] portends a significantly more aggressive tumor than Gleason score 6 (GS6). It is, therefore, critical to understand the molecular relationship of adjacent GP3 and GP4 tumor cell populations and relate molecular abnormalities to disease progression. To decipher molecular relatedness, we used laser capture microdissection (LCM) and whole-genome amplification (WGA) to separately collect and amplify DNA from adjacent GP3 and GP4 cell populations from 14 cases of GS7 prostate cancer. We then carried out massively parallel mate-pair next generation sequencing (NGS) to examine the landscape of large chromosomal alterations. We identified four to 115 DNA breakpoints in GP3 and 17 to 480 in GP4. Our findings indicate that while GP3 and GP4 from the same tumor each possess unique breakpoints, they also share identical ones, indicating a common origin. Approximately 300 chromosomal breakpoints were localized to the regions affected in at least two tumors, whereas more than 3,000 were unique within the set of 14 tumors. TMPRSS2–ERG was the most recurrent rearrangement present in eight cases, in both GP3 and GP4. PTEN rearrangements were found in five of eight TMPRSS2–ERG fusion–positive cases in both GP3 and GP4. Hierarchical clustering analysis revealed that GP3 has greater breakpoint similarity to its partner GP4 compared with GP3 from different patients. We show evidence that LCM, WGA, and NGS of adjacent tumor regions provide an important tool in deciphering lineage relationships and discovering chromosomal alterations associated with tumor progression. Cancer Res; 73(11); 3275–84. ©2013 AACR.
Extended Lymphadenectomy in Colon Cancer Is Debatable
Young‐Fadok, Tonia M., Murphy, Jamie

World Journal of Surgery | May 7, 2013 | Volume: 37 | Issue: 8 | Pages: 1799-1807

10.1007/s00268-013-2071-0 | PMID 23652354 Get It

AbstractExtended lymphadenectomy has gained considerable attention as an adjunct to conventional colon cancer surgery with the hope that it may potentially decrease local recurrence rates and improve cancer‐specific outcome measures. Despite the enthusiasm surrounding these techniques, it is difficult to establish any additional survival benefit associated with more comprehensive lymphadenectomy strategies when these are performed in addition to conventional colon cancer surgery. Furthermore, these techniques remain unproven by large randomized clinical trials. The appropriate indications for performing extended lymphadenectomy also remain unclear, and there is a lack of standardization with regard to surgical technique. Moreover, there are a number of confounding factors that frequently receive little attention when oncological outcome measures are reported following extended lymphadenectomy in the setting of colon cancer. The purpose of this review is to outline these confounding issues and discuss their impact on reports describing cancer‐specific outcome measures following the use of extended lymphadenectomy techniques. Furthermore, this review proposes that in light of the available published evidence, the role of radical lymphadenectomy is currently unproven, with large randomized clinical trials required in the future to determine whether there is a survival benefit for colon cancer patients.