Back to Authors

Halgrim, Scott

Mayo Clinic

Kaiser Permanente Washington Health Research Institute

Citations 1

Analysis of Cross-Institutional Medication Description Patterns in Clinical Narratives
Sohn, Sunghwan , Clark, Cheryl, Halgrim, Scott, Murphy, Seán , Jonnalagadda, Siddhartha , Wagholikar, Kavishwar B. , Wu, Stephen , Chute, Christopher G. , Liu, Hongfang

Biomedical Informatics Insights | June 24, 2013 | Volume: 6s1 | Issue: No issue available | Pages: BII.S11634

10.4137/bii.s11634 Get It

A large amount of medication information resides in the unstructured text found in electronic medical records, which requires advanced techniques to be properly mined. In clinical notes, medication information follows certain semantic patterns (eg, medication, dosage, frequency, and mode). Some medication descriptions contain additional word(s) between medication attributes. Therefore, it is essential to understand the semantic patterns as well as the patterns of the context interspersed among them (ie, context patterns) to effectively extract comprehensive medication information. In this paper we examined both semantic and context patterns, and compared those found in Mayo Clinic and i2b2 challenge data. We found that some variations exist between the institutions but the dominant patterns are common.