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258 citation(s) found for "Qi, Xiang".

Exploring the Trade-Offs: Unified Large Language Models vs Local Fine-Tuned Models for Highly-Specific Radiology NLI Task
Wu, Zihao , Zhang, Lu , Cao, Chao , Liu, Zhengliang , Zhao, Lin , Li, Yiwei , Dai, Haixing , Ma, Chong , Li, Gang , Liu, Tianming , Wu, Zihao , Zhang, Lu , Yu, Xiaowei , Liu, Wei , Li, Quanzheng , Shen, Dinggang G. , Li, Xiang , Zhu, Dajiang , Liu, Tianming

IEEE Transactions on Big Data | February 13, 2025 | Volume: 11 | Issue: 3 | Pages: 1027-1041

10.1109/tbdata.2025.3536928 Get It

AugGPT: Leveraging ChatGPT for Text Data Augmentation
Dai, Haixing , Liu, Zhengliang , Liao, Wenxiong , Huang, Xiaoke , Wu, Zihao , Zhao, Lin , Xu, Shaochen , Zeng, Fang , Liu, Wei , Liu, Ninghao , Shen, Dinggang, Liu, Tianming , Li, Xiang , Liu, Wei , Cao, Yihan , Li, Sheng , Zhu, Dajiang , Cai, Hongmin , Sun, Lichao , Li, Quanzheng , Shen, Dinggang G. , Li, Xiang

IEEE Transactions on Big Data | January 30, 2025 | Volume: 11 | Issue: 3 | Pages: 907-918

10.1109/tbdata.2025.3536934 Get It

INFORMING INTENSIVE CARE UNIT DIGITAL TWINS: DYNAMIC ASSESSMENT OF CARDIORESPIRATORY FAILURE TRAJECTORIES IN PATIENTS WITH SEPSIS
Hou, Grace Yao, Lal, Amos , Schulte, Phillip J. , Kılıçkaya, Oğuz , Gajic, Ognjen, Zhong, Xiang , Zhong, Xiang , Lal, Amos , Hou, Grace Yao, Dong, Yue , Gajic, Ognjen

Shock | January 23, 2025 | Volume: 63 | Issue: 4 | Pages: 573-578

10.1097/shk.0000000000002536 | PMID 39847720 Get It

ABSTRACT Understanding clinical trajectories of sepsis patients is crucial for prognostication, resource planning, and to inform digital twin models of critical illness. This study aims to identify common clinical trajectories based on dynamic assessment of cardiorespiratory support using a validated electronic health record data that covers retrospective cohort of 19,177 patients with sepsis admitted to intensive care units (ICUs) of Mayo Clinic Hospitals over 8-year period. Patient trajectories were modeled from ICU admission up to 14 days using an unsupervised machine learning two-stage clustering method based on cardiorespiratory support in ICU and hospital discharge status. Of 19,177 patients, 42% were female with a median age of 65 (interquartile range [IQR], 55–76) years, The Acute Physiology, Age, and Chronic Health Evaluation III score of 70 (IQR, 56–87), hospital length of stay (LOS) of 7 (IQR, 4–12) days, and ICU LOS of 2 (IQR, 1–4) days. Four distinct trajectories were identified: fast recovery (27% with a mortality rate of 3.5% and median hospital LOS of 3 (IQR, 2–15) days), slow recovery (62% with a mortality rate of 3.6% and hospital LOS of 8 (IQR, 6–13) days), fast decline (4% with a mortality rate of 99.7% and hospital LOS of 1 (IQR, 0–1) day), and delayed decline (7% with a mortality rate of 97.9% and hospital LOS of 5 (IQR, 3–8) days). Distinct trajectories remained robust and were distinguished by Charlson Comorbidity Index, The Acute Physiology, Age, and Chronic Health Evaluation III scores, as well as day 1 and day 3 SOFA ( P < 0.001 ANOVA). These findings provide a foundation for developing prediction models and digital twin decision support tools, improving both shared decision making and resource planning.
A Hybrid Simulation Approach for Modeling Critical Care Delivery in ICU
Zhong, Xiang , Neena, Siddharth Vipankumar Abrol, Hou, Grace Yao, Dong, Yue, Lal, Amos, Hou, Grace Yao, Gajic, Ognjen

2024 Winter Simulation Conference (WSC) | January 20, 2025 | Volume: No volume available | Issue: No issue available | Pages: 1233-1244

10.1109/wsc63780.2024.10838861 Get It

Ventilator-Associated Pneumonia After Cardiac Arrest and Prevention Strategies: A Narrative Review
Geetha, Harinivaas Shanmugavel , Teo, Yi Xiang , Ravichandran, Sharmitha, Lal, Amos , Lal, Amos

Medicina | January 6, 2025 | Volume: 61 | Issue: 1 | Pages: 78

10.3390/medicina61010078 | PMID 39859060 Get It

Background and Objectives: Ventilator-associated pneumonia (VAP) poses a significant threat to the clinical outcomes and hospital stays of mechanically ventilated patients, particularly those recovering from cardiac arrest. Given the already elevated mortality rates in cardiac arrest cases, the addition of VAP further diminishes the chances of survival. Consequently, a paramount focus on VAP prevention becomes imperative. This review endeavors to comprehensively delve into the nuances of VAP, specifically in patients requiring mechanical ventilation in post-cardiac arrest care. The overarching objectives encompass (I) exploring the etiology, risk factors, and pathophysiology of VAP, (II) delving into available diagnostic modalities, and (III) providing insights into the management options and recent treatment guidelines. Methods: A literature search was conducted using PubMed, MEDLINE, and Google Scholar databases for articles about VAP and Cardiac arrest. We used the MeSH terms “VAP”, “Cardiac arrest”, “postcardiac arrest syndrome”, and “postcardiac arrest syndrome”. The clinical presentation, diagnostic, and management strategies of VAP were summarized, and all authors reviewed the selection and decided which studies to include. Key Content and Findings: The incidence and mortality rates of VAP exhibit significant variability, yet a recurring pattern emerges, marked by prolonged hospitalization and exacerbated clinical outcomes. This pattern is attributed to the elevated incidence of drug-resistant infections and the delayed initiation of antimicrobial treatment. This review focuses on VAP, aiming to offer valuable insights into the efficient identification and management of this fatal complication in post-cardiac arrest patients. Conclusion: The prognosis for survival after cardiac arrest is already challenging, and the outlook becomes even more daunting when complicated by VAP. The timely diagnosis of VAP and initiation of antibiotics pose considerable challenges, primarily due to the invasive nature of obtaining high-quality samples and the time required for speciation and identification of antimicrobial sensitivity. The controversy surrounding prophylactic antibiotics persists, but promising new strategies have been proposed; however, they are still awaiting well-designed clinical trials.
FECAL TRANSPLANT FROM LONG LIVING AMES DWARF MICE ALTERS THE MICROBIOME AND BIOMARKERS OF LIVER HEALTH IN CONTROL MICE
Hayslip, Natalie, Chaudhari, Diptaraj , Zhu, Xiang , Ashiqueali, Sarah , Schneider, Augusto , Noureddine, Sarah A. , Yadav, Hariom , Masternak, Michal M

Innovation in Aging | January 1, 2025 | Volume: 8 | Issue: Supplement_1 | Pages: 1141-1141

10.1093/geroni/igae098.3659 Get It

Abstract Aging is associated with intestinal dysbiosis, a condition characterized by diminished microbial biodiversity and inflammation. This leads to increased vulnerability to extraintestinal manifestations such as autoimmune, metabolic, and neurodegenerative conditions and accelerates mortality. As such, modulation of the gut microbiome is a promising way to extend healthspan. In this study, we explore the effects of fecal microbiota transplant (FMT) from long-living Ames dwarf donors to their normal littermates, and vice versa, on the recipient gut microbiota and liver transcriptome. Importantly, our previous studies highlight differences between the microbiomes of Ames dwarf relative to their normal siblings, potentially contributing to their extended lifespan and healthspan. Our findings demonstrate that FMT from Ames dwarf mice to normal mice significantly alters the recipient’s gut microbiota, reprograms bacterial metabolic functions related to healthy aging, and changes the liver transcriptome, indicating improved metabolic health. Our liver mRNA sequencing and RT-PCR validation reveals that FMT in normal recipient animals administered dwarf donor stool may contribute to the significant downregulation of p21, Elovl3, and Insig2, genes involved with cellular senescence and liver metabolic pathways. Our data suggest a regulatory axis exists between the gut and liver, highlighting the potential of microbiome-targeted therapies in promoting healthy aging. Future research should validate these findings and study the underlying mechanisms that confer geroprotection.
Stiffness analysis of meningiomas using neural network-based inversion on MR Elastography
Murphy, Matthew C. , Camerucci, Emanuele , Plitt, Aaron , Shan, Xiang , Zheng, Keni , Sui, Yi, Manduca, Armando , Gompel, Jamie J. Van , Ehman, Richard L. , Huston, John , Yin, Ziying

2024 46th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC) | December 17, 2024 | Volume: No volume available | Issue: No issue available | Pages: 1-5

10.1109/embc53108.2024.10781605 | PMID 40039666 Get It

Creation of a Multistate Model to Improve Prognostication across the Disease Course in Advanced Stage Classic Hodgkin Lymphoma (cHL): A Report from the Holistic Consortium
Rodday, Angie Mae , Zhu, Cui , Xiang, Qingyan , Counsell, Nicholas , Upshaw, Jenica , Kirkwood, Amy A. , Li, Hongli , Federico, Massimo, Friedberg, Jonathan W. , Gallamini, Andrea , Hutchings, Martin , Evens, Andrew M. , Evens, Andrew M , Parsons, Susan K. , Rossetti, Sára , Williams, Annalynn M , Cerhan, James R. , Hawkes, Eliza A. , Hodgson, David , Johnson, Peter , Link, Brian K. , Mou, Eric , Radford, John , Savage, Kerry J. , Stephens, Deborah M. , Zinzani, Pier Luigi , Maurer, Matthew J.

Blood | December 5, 2024 | Volume: 144 | Issue: Supplement 1 | Pages: 567-567

10.1182/blood-2024-207439 Get It

Background: Although advanced stage cHL typically has excellent disease outcomes, 20-30% of patients (pts) experience treatment failure. In addition, decision-making is challenging given varying treatment options and incomplete prognostic data across the disease course. Pre-treatment factors, such as those incorporated into the Advanced Stage Hodgkin Lymphoma International Prognostication Index (A-HIPI), predict 5 year (y) overall survival (OS) and progression-free survival (PFS) (Rodday JCO 2023). Other than interim PET (iPET) results, it is unknown what factors influence cHL disease states mid-therapy. Using multistate modeling (MSM) and individual pt data from the HoLISTIC Consortium, we refined prognostication across the cHL disease course, specifically assessing the relationships between A-HIPI, iPET and end of treatment (EOT) response, and whether the A-HIPI and iPET provide independent prognostic information. Methods: We analyzed 1240 pts aged 18-65y with newly diagnosed Stage IIB, III or IV cHL treated on 2 advanced stage PET-adapted trials (RATHL, SWOG0816). All pts first received 2 cycles of ABVD; those with a negative iPET (Deauville score (DS) ≤3) received ABVD or AVD, and those with a positive iPET (DS &gt;3) received BEACOPP. In contrast to other methods, MSMs incorporate multiple disease states into one model, account for censoring and competing risks, and estimate transitions between disease states using different covariates. Our MSM had 6 states: diagnosis, negative iPET, positive iPET, EOT non-progression (e.g., DS ≤ 3), treatment failure, and death. Treatment failure included progression or relapse. All pts start at the diagnosis state and can transition to other states without return to prior states. Transition states with &lt;5 events were excluded. The MSM was estimated using a multivariable Cox model with censoring at 5y. Covariates were the 5y PFS A-HIPI (comprised of stage and continuous age, lymphocyte count and albumin), which was included for all transitions, and iPET, which was included for transitions from EOT non-progression and from treatment failure. Higher scores on the 5y PFS A-HIPI indicate lower risk of progression or death; the A-HIPI was modeled for a 1 standard deviation (SD) increase. We calculated probabilities of 5y treatment failure for 4 sample pts based on low (70) and high (85) A-HIPI scores, positive and negative iPET, and EOT non-progression. Results: Median age was 33y (Q1=25, Q3=45), 56% were male, 23% were stage IIB, 40% III and 37% IV, and mean A-HIPI was 77 (SD=7). Median follow-up was 75 months (Q1=53, Q3=92). At iPET, 80% (95% CI 78%, 83%) were negative and 16% (95% CI 14%, 18%) were positive. At EOT, 90% (95% CI 89%, 92%) were in the non-progression state. At 5y, 75% (95% CI 73%, 78%) were in the non-progression state, 16% (95% CI 14%, 19%) had experienced treatment failure, and 9% (7%, 11%) had died. Better A-HIPI scores (per SD) were associated with lower rates of transitioning from diagnosis to positive iPET (HR=0.80, p&lt;0.01) and from positive iPET to treatment failure (HR=0.58, p=0.04). Better A-HIPI scores (per SD) were also associated with lower rates of transitioning from EOT non-progression to treatment failure (HR=0.78, p&lt;0.01) and from treatment failure to death (HR=0.64, p&lt;0.01), adjusting for iPET. Positive iPET was associated with an increased rate of transitioning from EOT non-progression to treatment failure (HR=1.90, p&lt;0.01), adjusting for A-HIPI. The probability of 5y treatment failure for 4 sample pts was: 25% for low A-HIPI and positive iPET; 20% for high A-HIPI and positive iPET; 13% for low A-HIPI and negative iPET; and 12% for high A-HIPI and negative iPET. Conclusions: We created a novel MSM that refines prognostication across the cHL disease course by incorporating pre- and post-treatment factors (e.g., iPET) to estimate transitions to future disease states. Although the A-HIPI was developed using pre-treatment factors to predict 5y OS and PFS, we found that it was also associated with transitions to interim disease states, including iPET and EOT response. The A-HIPI and iPET each provided independent prognostic information, supporting the use of both in estimating cHL outcomes. Future analyses will develop clinical prediction models using MSMs that also incorporate varying frontline and salvage treatments and treatment-specific late effects, with the goal of providing individualized information across the disease course.
Artificial General Intelligence for Medical Imaging Analysis
Li, Xiang , Zhao, Lin , Zhang, Lu , Wu, Zihao , Liu, Zhengliang , Jiang, Hanqi , Cao, Chao , Xu, Shaochen , Li, Yiwei , Dai, Haixing , Liu, Jun , Liu, Tianming , Yuan, Yixuan , Li, Gang , Zhu, Dajiang , Yan, Pingkun , Li, Quanzheng , Liu, Wei , Shen, Dinggang G.

IEEE Reviews in Biomedical Engineering | November 7, 2024 | Volume: 18 | Issue: No issue available | Pages: 113-129

10.1109/rbme.2024.3493775 | PMID 39509310 Get It

Explainable artificial intelligence and domain adaptation for predicting HIV infection with graph neural networks
Yu, Evan , Du, Jingcheng , Hu, Xinyue , Feng, Jingna , Luo, Xi , Zhi, Degui , Tao, Cui , Zhi, Degui , Tao, Cui , Xiang, Yang , Schneider, John Alexis , Fujimoto, Kayo

Annals of Medicine | October 17, 2024 | Volume: 56 | Issue: 1 | Pages: No page available

10.1080/07853890.2024.2407063 | PMID 39417227 Get It