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4085 citation(s) found for "Yu, Jonathan".

A Novel Method to Capture Methylated Human DNA from Stool: Implications for Colorectal Cancer Screening
Zou, Hongzhi , Harrington, Jonathan J. , Rego, Rafaela L. , Ahlquist, David A.

Clinical Chemistry | August 21, 2007 | Volume: 53 | Issue: 9 | Pages: 1646-1651

10.1373/clinchem.2007.086223 | PMID 17712002 Get It

AbstractBackground: Assay of methylated DNA markers in stool is a promising approach for colorectal cancer (CRC) screening. A method to capture hypermethylated CpG islands from stool would enrich target analyte and allow optimal assay sensitivity.Methods: Methyl-binding domain (MBD) protein was produced using a pET6HMBD plasmid with MBD DNA sequence cloned from rat MeCP2 gene and bound to a column of nickel-agarose resin. We first established the feasibility of using the MBD column to extract methylated human DNA in a high background of fecal bacterial DNA. To explore the impact of MBD enrichment on detection sensitivity, the tumor-associated methylated vimentin gene was assayed with methylation-specific PCR from stools to which low amounts of cancer cell DNA (0–50 ng) were added and from stools from CRC patients and healthy individuals. Stools from cancer patients were selected with low amounts of human DNA (median 7 ng, range 0.5–832 ng).Results: With MBD enrichment, methylated vimentin was detected in stools enriched with ≥10 ng of cancer cell DNA and in CRC stool with a range of native human DNA amounts from 4 to 832 ng. Without MBD enrichment, methylated vimentin was not detected in the enriched stools and was detected in only 1 cancer stool with high human DNA (832 ng). In stools from healthy individuals methylated vimentin was not detected, with or without MBD enrichment.Conclusions: MBD capture increases assay sensitivity for detecting methylated DNA markers in stool. Applied clinical studies for stool cancer screening are indicated.
Long-Term Continence Outcomes After Immediate Repair of Pediatric Bladder Neck Lacerations Extending Into the Urethra
Routh, Jonathan C. , Husmann, Douglas A. , Routh, Jonathan C

Journal of Urology | August 18, 2007 | Volume: 178 | Issue: 4S | Pages: 1816-1818

10.1016/j.juro.2007.05.094 | PMID 17707005 Get It

Urachal Anomalies: A Longitudinal Study of Urachal Remnants in Children and Adults
Ashley, Richard , Inman, Brant A. , Routh, Jonathan C. , Rohlinger, Audrey L., Husmann, Douglas A. , Kramer, Stephen A., Routh, Jonathan C , Inman, Brant A

Journal of Urology | August 18, 2007 | Volume: 178 | Issue: 4S | Pages: 1615-1618

10.1016/j.juro.2007.03.194 | PMID 17707039 Get It

Traumatic Obliterative Urethral Strictures in Pediatric Patients: Failure of the Cut to Light Technique at Long-Term Followup
Tollefson, Matthew K. , Ashley, Richard , Routh, Jonathan C. , Husmann, Douglas A. , Routh, Jonathan C

Journal of Urology | August 18, 2007 | Volume: 178 | Issue: 4S | Pages: 1656-1658

10.1016/j.juro.2007.03.182 | PMID 17707030 Get It

Multivariate Comparison of the Efficacy of Intraureteral Versus Subtrigonal Techniques of Dextranomer/Hyaluronic Acid Injection
Routh, Jonathan C. , Reinberg, Yuri, Ashley, Richard , Inman, Brant A. , Wolpert, James J., Vandersteen, David R. , Husmann, Douglas A. , Kramer, Stephen A., Routh, Jonathan C , Inman, Brant A

Journal of Urology | August 18, 2007 | Volume: 178 | Issue: 4S | Pages: 1702-1706

10.1016/j.juro.2007.03.174 | PMID 17707019 Get It

Histopathological Changes Associated With Dextranomer/Hyaluronic Acid Injection for Pediatric Vesicoureteral Reflux
Routh, Jonathan C. , Ashley, Richard , Sebo, Thomas J., Vandersteen, David R. , Slezak, Jeffrey M., Reinberg, Yuri, Routh, Jonathan C

Journal of Urology | August 18, 2007 | Volume: 178 | Issue: 4S | Pages: 1707-1710

10.1016/j.juro.2007.03.165 | PMID 17707018 Get It

THE RELIABILITY OF INTRADISCAL STRESS PROFILOMETRY IN CADAVERIC LUMBAR DISCS
Gay, Ralph E. , Ilharreborde, Brice , Bridges, Jonathan, An, Kai‐Nan , Zhao, Kristin D.

Journal of Musculoskeletal Research | July 18, 2007 | Volume: 10 | Issue: 04 | Pages: 163-171

10.1142/s0218957706001844 Get It

The measurement of intradiscal stress has been primarily limited to nucleus pulposus pressure. Intradiscal stress profilometry is a technique that measures stress in both the nucleus pulposus (hydrostatic) and annulus fibrosus (compression). Evidence from animal studies suggests that distraction may affect disc physiology and promote repair. A study was performed to determine the reliability of intradiscal stress profilometry measurements in the anterior, posterior, and nucleus regions of cadaveric lumbar discs. Four fresh-frozen human lumbar motion segments were prepared and tested. Five profiles were obtained during two conditions of compression and three conditions of distraction. Discs were then graded for degenerative change. Reliability was judged by within-specimen coefficients of variation. The coefficients of variation were smaller (more reliable) for compression conditions than for distraction conditions. Within-specimen coefficients during compression ranged from 1.58% to 37.2% in the nucleus, 3.9% to 67.4% in the anterior annulus, and 2.3% to 25.5% in the posterior annulus. The reliability of intradiscal stress profilometry is acceptable for repeated measures studies evaluating within-specimen changes, but the sample size will vary depending on the test conditions used and the disc region of interest.
Potentials and Limitations of Cognitive Treatments for Obsessive‐Compulsive Disorder
Taylor, Steven , McKay, Dean , Abramowitz, Jonathan S.

Cognitive Behaviour Therapy | June 25, 2007 | Volume: 34 | Issue: 3 | Pages: 140-147

10.1080/16506070510041202 | PMID 16195053 Get It

EGFR-T790M Is a Rare Lung Cancer Susceptibility Allele with Enhanced Kinase Activity
Vikis, Haris G., Sato, Mitsuo , James, Michael A. , Wang, Daolong, Wang, Yian , Wang, Min , Jia, Dongmei , Liu, Yan , Bailey‐Wilson, Joan E. , Pinney, Susan M. , Petersen, Gloria M. , Wiest, Jonathan S., Fain, Pamela R., Schwartz, Ann G. , Gazdar, Adi F. , Gaba, Colette , Rothschild, Henry, Mandal, Diptasri , Kupert, Elena, Seminara, Daniela, Viswanathan, Avinash, Govindan, Ramaswamy , Anderson, Marshall W., You, Ming , Amos, Christopher I. , Andrade, Mariza de , Yang, Ping , Minna, John Dorrance , Wilson, Richard K , Pinney, Susan M , Govindan, Ramaswamy

Cancer Research | May 18, 2007 | Volume: 67 | Issue: 10 | Pages: 4665-4670

10.1158/0008-5472.can-07-0217 | PMID 17510392 Get It

Abstract The use of tyrosine kinase inhibitors (TKI) has yielded great success in treatment of lung adenocarcinomas. However, patients who develop resistance to TKI treatment often acquire a somatic resistance mutation (T790M) located in the catalytic cleft of the epidermal growth factor receptor (EGFR) enzyme. Recently, a report describing EGFR-T790M as a germ-line mutation suggested that this mutation may be associated with inherited susceptibility to lung cancer. Contrary to previous reports, our analysis indicates that the T790M mutation confers increased Y992 and Y1068 phosphorylation levels. In a human bronchial epithelial cell line, overexpression of EGFR-T790M displayed a growth advantage over wild-type (WT) EGFR. We also screened 237 lung cancer family probands, in addition to 45 bronchoalveolar tumors, and found that none of them contained the EGFR-T790M mutation. Our observations show that EGFR-T790M provides a proliferative advantage with respect to WT EGFR and suggest that the enhanced kinase activity of this mutant is the basis for rare cases of inherited susceptibility to lung cancer. [Cancer Res 2007;67(10):4665–70]
Aurora A and B Overexpression and Centrosome Amplification in Early Estrogen-Induced Tumor Foci in the Syrian Hamster Kidney: Implications for Chromosomal Instability, Aneuploidy, and Neoplasia
Hontz, Adrianne E. , Li, Sara Antonia, Lingle, Wilma L., Negron, Vivian , Bruzek, Amy K., Salisbury, Jeffrey L., Li, Jonathan J.

Cancer Research | April 5, 2007 | Volume: 67 | Issue: 7 | Pages: 2957-2963

10.1158/0008-5472.can-06-3296 | PMID 17409401 Get It

Abstract Estrogen-induced Syrian hamster tumors in the kidney represent a useful model to gain insight into the role of estrogens in oncogenic processes. We provided evidence that early tumor foci in the kidney arise from interstitial ectopic uterine-like germinal stem cells, and that early tumor foci and well-established tumors are highly aneuploid (92–94%). The molecular mechanisms whereby estrogens mediate this process are unclear. Here, we report that estrogen treatment induced significant increases in Aurora A protein expression (8.7-fold), activity (2.6-fold), mRNA (6.0-fold), and Aurora B protein expression (4.6-fold) in tumors, compared with age-matched cholesterol-treated kidneys. Immunohistochemistry revealed that this increase in Aurora A and B protein expression was essentially confined to cells within early and large tumor foci at 3.5 and 6 months of estrogen treatment, respectively. Upon estrogen withdrawal or coadministration of tamoxifen for 10 days, a 78% to 79% and 81% to 64% reduction in Aurora A and B expression, respectively, were observed in primary tumors compared with tumors continuously exposed to estrogens. These data indicate that overexpressed Aurora A and B in these tumors are under estrogen control via estrogen receptor α. Aurora A coenriched with the centrosome fraction isolated from tumors in the kidney. Centrosome amplification (number and area/cell) was detected in early tumor foci and large tumors but not in adjacent uninvolved or age-matched control kidneys. Taken together, these data indicate that persistent overexpression of Aurora A and B is under estrogen control, and is coincident with centrosome amplification, chromosomal instability, and aneuploidy, and represent an important mechanism driving tumorigenesis. [Cancer Res 2007;67(7):2957–63]