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42 citation(s) found for "Wu, Fen".

Phantom validation of quantitative susceptibility and dynamic contrast‐enhanced permeability MR sequences across instruments and sites
Hobson, Nicholas , Polster, Sean P. , Flemming, Kelly D. , Shu, Yunhong , Huston, John , Gerrard, Chandra Y., Selwyn, Reed , Mabray, Marc C. , Zafar, Atif , Girard, Romuald , Carrión‐Penagos, Julián , Chen, Yu Fen, Parrish, Todd B. , Zhou, Xiaohong Joe , Stadnik, Agnieszka , Koskimäki, Janne , Turley, Dallas, Awad, Issam A. , Flemming, Kelly, Girard, Romuald , Carrión-Penagos, Julián , Zhou, Xiaohong Joe , Mabray, Marc C , Flemming, Kelly D , Hobson, Nicholas , Polster, Sean P , Cao, Ying , Koenig, James I. , Shenkar, Robert , Dimov, Alexey , Carroll, Timothy

Journal of Magnetic Resonance Imaging | September 13, 2019 | Volume: 51 | Issue: 4 | Pages: 1192-1199

10.1002/jmri.26927 | PMID 31515878 Get It

BackgroundQuantitative susceptibility mapping (QSM) and dynamic contrast‐enhanced quantitative permeability (DCEQP) on magnetic resonance (MR) have been shown to correlate with neurovascular disease progression as markers of vascular leakage and hemosiderin deposition. Applying these techniques as monitoring biomarkers in clinical trials will be necessary; however, their validation across multiple MR platforms and institutions has not been rigorously verified.PurposeTo validate quantitative measurement of MR biomarkers on multiple instruments at different institutions.Study TypePhantom validation between platforms and institutions.Phantom ModelT1/susceptibility phantom, two‐compartment dynamic flow phantom.Field Strength/Sequence3T/QSM, T1 mapping, dynamic 2D SPGR.AssessmentPhilips Ingenia, Siemens Prisma, and Siemens Skyra at three different institutions were assessed. A QSM phantom with concentrations of gadolinium, corresponding to magnetic susceptibilities of 0, 0.1, 0.2, 0.4, and 0.8 ppm was assayed. DCEQP was assessed by measuring a MultiHance bolus as the consistency of the width ratio of the curves at the input and outputs over a range of flow ratios between outputs.Statistical TestsEach biomarker was assessed by measures of accuracy (Pearson correlation), precision (paired t‐test between repeated measurements), and reproducibility (analysis of covariance [ANCOVA] between instruments).ResultsQSM accuracy of r2 > 0.997 on all three platforms was measured. Precision (P = 0.66 Achieva, P = 0.76 Prisma, P = 0.69 Skyra) and reproducibility (P = 0.89) were good. T1 mapping of accuracy was r2 > 0.98. No significant difference between width ratio regression slopes at site 2 (P = 0.669) or site 3 (P = 0.305), and no significant difference between width ratio regression slopes between sites was detected by ANCOVA (P = 0.48).Data ConclusionThe phantom performed as expected and determined that MR measures of QSM and DCEQP are accurate and consistent across repeated measurements and between platforms.Level of Evidence: 1Technical Efficacy Stage: 2J. Magn. Reson. Imaging 2020;51:1192–1199.
Catechol O‐Methyltransferase Pharmacogenomics: Challenges and Opportunities
Ho, Ming‐Fen , Weinshilboum, Richard M. , Weinshilboum, Richard M. , Ho, Ming-Fen

Clinical Pharmacology & Therapeutics | May 13, 2019 | Volume: 106 | Issue: 2 | Pages: 281-283

10.1002/cpt.1452 | PMID 31081936 Get It

O4‐02‐01: SOLUBLE TREM2 MODULATES MICROGLIAL FUNCTION AND PROTECTS AGAINST AMYLOID PATHOLOGY
Chen, Xiao‐Fen , Zhong, Li, Wang, Tingting , Wang, Zongqi , Bu, Guojun

Alzheimer's & Dementia | October 22, 2018 | Volume: 14 | Issue: 7S_Part_26 | Pages: No page available

10.1016/j.jalz.2018.06.2915 Get It

Synthetic Lethality of PARP Inhibition and Ionizing Radiation is p53-dependent
Sizemore, Steven T. , Mohammad, Rahman, Nowsheen, Somaira , Ostrowski, Michael C. , Chakravarti, Arnab , Xia, Fen , Chakravarti, Arnab , Nowsheen, Somaira , Sizemore, Gina M. , Yu, Hao , Chakravarti, Arnab

Molecular Cancer Research | March 28, 2018 | Volume: 16 | Issue: 7 | Pages: 1092-1102

10.1158/1541-7786.mcr-18-0106 | PMID 29592899 Get It

Abstract PARP inhibitors (PARPi) are potentially effective therapeutic agents capable of inducing synthetic lethality in tumors with deficiencies in homologous recombination (HR)-mediated DNA repair such as those carrying BRCA1 mutations. However, BRCA mutations are rare, the majority of tumors are proficient in HR repair, and thus most tumors are resistant to PARPi. Previously, we observed that ionizing radiation (IR) initiates cytoplasmic translocation of BRCA1 leading to suppression of HR-mediated DNA repair and induction of synthetic PARPi lethality in wild-type BRCA1 and HR-proficient tumor cells. The tumor suppressor p53 was identified as a key factor that regulates DNA damage–induced BRCA1 cytoplasmic sequestration following IR. However, the role of p53 in IR-induced PARPi sensitization remains unclear. This study elucidates the role of p53 in IR-induced PARPi cytotoxicity in HR-proficient cancer cells and suggests p53 status may help define a patient population that might benefit from this treatment strategy. Sensitization to PARPi following IR was determined in vitro and in vivo utilizing human breast and glioma tumor cells carrying wild-type BRCA1 and p53, and in associated cells in which p53 function was modified by knockdown or mutation. In breast and glioma cells with proficient HR repair, IR-induced BRCA1 cytoplasmic sequestration, HR repair inhibition, and subsequent PARPi sensitization in vitro and in vivo was dependent upon functional p53. Implications: Implications: p53 status determines PARP inhibitor sensitization by ionizing radiation in multiple BRCA1 and HR-proficient tumor types and may predict which patients are most likely to benefit from combination therapy. Mol Cancer Res; 16(7); 1092–102. ©2018 AACR.
Early Markers of Angiogenesis and Ischemia during Bowel Conduit Neovascularization
Ciudad, Pedro , Torto, Federico Lo , Li, Yun-Fen , Nguyen, Doan-Minh, Chen, Hung‐Chi , Manrique, Oscar J. , Chen, Hung‐Chi , Wong, Alex K. , Chen, Pei‐Yu

Journal of Reconstructive Microsurgery | June 19, 2017 | Volume: 33 | Issue: 09 | Pages: 605-611

10.1055/s-0037-1603905 | PMID 28628933 Get It

Background Bowel flaps are a good and reliable method to restore the continuity of the aerodigestive tract. Radiated fields, contaminated recipient sites, or depleted recipient vessels may increase the risk for ischemic injury after transfer. During ischemic events, we believe that bowel conduits with serosa have a delayed neovascularization process at its new recipient site.We conducted an ischemia/reperfusion murine model to understand the difference among bowel conduits with and without serosa. Materials and Methods Two groups of rats were compared: control group (jejunal conduit with serosa) and a target group (jejunal conduit without serosa). These conduits were harvested from the peritoneal cavity and transferred into a subcutaneous pocket. After 72 hours of transfer and pedicle ligation, histological changes related to ischemia/reperfusion were assessed. In addition, tissue markers of angiogenesis (CD34), ischemia (lactate dehydrogenase [LDH]), and inflammation (interleukin [IL]-1β and IL-6) were analyzed. Results Two groups (n = 20) of male rats were analyzed. Histology showed intact jejunal mucosa in the target group. The control group showed decreased number of mucin, globet cells, decreased height, and fragmentation of villi with the absence of intestinal glands. Markers of angiogenesis (CD34) were higher in the target group. In addition, markers of ischemia (LDH) (p = 0.0045) and inflammation (IL-1b, p = 0.0008, and IL-6, p = 0.0008) were significantly lower in the target group as compared with the control group. Conclusions In circumstances in which the recipient site does not offer an adequate and healthy bed or a vascular insult occurs, bowel flaps with less amount of serosa may be able to neovascularize faster thereby increasing its chances of survival.
The role of FGF signaling in VEGF-pathway targeted therapy resistance: Data from patients and model systems.
Warneke, Carla L. , Hoang, Anh , Tamboli, Pheroze, Wang, Fen , Ho, Thai H. , Jonasch, Eric W.

Journal of Clinical Oncology | February 24, 2017 | Volume: 31 | Issue: 6_suppl | Pages: 386-386

10.1200/jco.2013.31.6_suppl.386 Get It

386 Background: Angiogenesis plays a role in tumor growth and is partly mediated by factors in both the fibroblast growth factor (FGF) and vascular endothelial growth factor (VEGF) pathways. Brivanib inhibits both VEGF receptor 2 and FGF receptors (FGFR)-1/2. Methods: Nephrectomy material from 40 patients with metastatic renal cell carcinoma (RCC) receiving sorafenib ± interferon was assessed by immunohistochemical (IHC) staining. The Ariol imaging platform was used to stratify the specimens based on intensity of staining for FGF biomarkers: FGFR-1 and fibroblast growth factor receptor substrate 2 (pFRS2). The relationship between fibroblast growth factor pathway marker levels and progression-free survival (PFS) was analyzed using Kaplan-Meier and Cox proportional hazards regression methods. To assess the efficacy of dual targeting of VEGF and FGF receptor signaling by brivanib, we treated a xenograft RCC mouse model with sunitinib, brivanib, or sunitinib followed by brivanib. Results: Our analysis indicated that more intense FGFR-1 staining was associated with shorter PFS (p = 0.0452), and that pFRS2 staining were not significantly associated with PFS (p = 0.2610). FGF pathway activation was associated with decreased PFS in patients with metastatic RCC treated with sorafenib. Xenograft mice were treated with 20 mg/kg sunitinib and after an initial stabilization phase, resistance developed by day 20. A switch to 30 mg/kg brivanib prolonged the stabilization phase after progression on sunitinib (p = 0.0033). Conclusions: The PFS of patients treated with sorafenib is associated with FGF pathway activation. In a xenograft RCC mouse model, brivanib overcame the tumor escape after initial treatment with sunitinib. Switching from sunitinib to brivanib at the time of tumor escape prolonged the stabilization phase and overcame a sunitinib-induced resistance phenotype. The results suggest that FGF pathway activation mediates both innate and acquired tumor resistance to VEGF receptor inhibition. The efficacy of dual inhibition of FGF and VEGF in the subset of patients with increased FGF activation prior to treatment requires further study.
Soluble TREM2 induces inflammatory responses and enhances microglial survival
Zhong, Li , Chen, Xiao‐Fen , Liao, Chunyan , Huang, Ruizhi, Wang, Daxin , Wu, Linbei, Jia, Lin , Zheng, Honghua , Painter, Meghan M. , Atagi, Yuka, Liu, Chia‐Chen , Zhang, Yun‐wu , Fryer, John Denis , Xu, Huaxi , Bu, Guojun , Painter, Meghan , Atagi, Yuka , Liu, Chia-Chen , Fryer, John D., Wang, Tingting , Wang, Zhe , Wang, Zongqi , Li, Xinxiu , Bu, Guojun

Journal of Experimental Medicine | February 16, 2017 | Volume: 214 | Issue: 3 | Pages: 597-607

10.1084/jem.20160844 | PMID 28209725 Get It

Triggering receptor expressed on myeloid cells 2 (TREM2) is an innate immune receptor expressed in microglia in the brain. A soluble form of TREM2 (sTREM2) derived from proteolytic cleavage of the cell surface receptor is increased in the preclinical stages of AD and positively correlates with the amounts of total and phosphorylated tau in the cerebrospinal fluid. However, the physiological and pathological functions of sTREM2 remain unknown. Here, we show that sTREM2 promotes microglial survival in a PI3K/Akt-dependent manner and stimulates the production of inflammatory cytokines depending on NF-κB. Variants of sTREM2 carrying AD risk-associated mutations were less potent in both suppressing apoptosis and triggering inflammatory responses. Importantly, sTREM2 delivered to the hippocampi of both wild-type and Trem2-knockout mice elevated the expression of inflammatory cytokines and induced morphological changes of microglia. Collectively, these data indicate that sTREM2 triggers microglial activation inducing inflammatory responses and promoting survival. This study has implications for the pathogenesis of AD and provides insights into targeting sTREM2 pathway for AD therapy.
TGF-β inhibitors stimulate red blood cell production by enhancing self-renewal of BFU-E erythroid progenitors
Gao, Xiaofei , Lee, Hsiang‐Ying , Rocha, Edroaldo Lummertz da , Zhang, Cheng , Lu, Yi-Fen , Feng, Yuxiong , Ezike, Jideofor , Elmes, Russell R., Barrasa, M. Inmaculada , Cahan, Patrick , Hu, Li , Daley, George Q. , Lodish, Harvey F. , da Rocha, Edroaldo Lummertz, Li, Dandan , Zhang, Cheng

Blood | October 24, 2016 | Volume: 128 | Issue: 23 | Pages: 2637-2641

10.1182/blood-2016-05-718320 | PMID 27777239 Get It

Key Points The type III TGF-β receptor is a marker that distinguishes “early” and “late” BFU-Es. TGF-β inhibitors increase early BFU-E cell self-renewal and total erythroblast production.
Spt4 selectively regulates the expression of C9orf72 sense and antisense mutant transcripts
Kramer, Nicholas J. , Carlomagno, Yari , Zhang, Yong‐Jie , Almeida, Sandra , Cook, Casey , Prudencio, Mercedes , Blitterswijk, Marka van , Belzil, Véronique , Couthouis, Julien , Paul, Joseph W. , Goodman, Lindsey D. , Daughrity, Lillian M. , Chew, Jeannie , Garrett, Aliesha, Pregent, Luc , Jansen‐West, Karen , Tabassian, Lilia J., Rademakers, Rosa , Graff‐Radford, Neill R. , Josephs, Keith A. , Parisi, Joseph E., Petersen, Ronald C. , Deng, Ning , Feng, Yanan , Cheng, Tzu-Hao, Cohen, Stanley N. , Link, Christopher D. , Gao, Fen‐Biao , Petrucelli, Leonard , Gitler, Aaron D. , O’Raw, Aliesha D. , Cook, Casey N, Gendron, Tania F. , van Blitterswijk, Marka, Daughrity, Lillian, Jansen-West, Karen, Boylan, Kevin, Boylan, Khrista , Knopman, David S. , Boeve, Bradley F. , Dickson, Dennis W. , Bonini, Nancy M. , Zhang, Yong-Jie , Prudencio, Mercedes , O'Raw, Aliesha , van Blitterswijk, Marka , Gitler, Aaron D

Science | August 11, 2016 | Volume: 353 | Issue: 6300 | Pages: 708-712

10.1126/science.aaf7791 | PMID 27516603 Get It

Targeting three defects with one strategy The neurodegenerative diseases amyotrophic lateral sclerosis and frontotemporal dementia are most commonly caused by a mutation in the C9orf72 gene. The mutation is an expanded hexanucleotide repeat in a noncoding region. The expanded repeat produces sense and antisense RNA transcripts, which accumulate in patient cells and appear to sequester RNA-binding proteins. The sense and antisense transcripts are also translated into dipeptide repeat proteins, which are aggregation-prone and accumulate in the brain and spinal cord. Last, loss of function from reduced expression of C9orf72 in neurons and glia could contribute to the disease. Kramer et al. targeted both sense and antisense repeats by blocking a single gene called SPT4 , which mitigated degeneration in human cells by reducing all three types of pathologies. Science , this issue p. 708