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708 citation(s) found for "Wu, Derek".

The biofilm community resurfaces: new findings and post-pandemic progress
Greenwich, Jennifer L. , Fleming, Derek , Banin, Ehud , Häußler, Susanne , Kjellerup, Birthe V. , Sauer, Karin , Visick, Karen L. , Fuqua, Clay , Fleming, Derek

Journal of Bacteriology | September 27, 2023 | Volume: 205 | Issue: 10 | Pages: No page available

10.1128/jb.00166-23 | PMID 37756166 Get It

ABSTRACT The ninth American Society for Microbiology Conference on Biofilms was convened in-person on 13–17 November 2022 in Charlotte, NC. As the first of these conferences since prior to the start of the COVID-19 pandemic, the energy among the participants of the conference was clear, and the meeting was a tremendous success. The mixture of >330 oral and poster presentations resoundingly embodied the vitality of biofilm research across a wide range of topics and multiple scientific disciplines. Special activities, including a pre-conference symposium for early career researchers, further enhanced the attendee experience. As a general theme, the conference was deliberately structured to provide high levels of participation and engagement among early career scientists.
The cost-effectiveness of non-invasive stool-based colorectal cancer screening offerings from age 45 for a commercial and medicare population
Ebner, Derek, Barnieh, Lianne , Sharma, Rishika , Smith, Nathaniel , Estes, Chris , Fendrick, A. Mark , Fendrick, A Mark , Kisiel, John, Barnieh, Lianne , Ebner, Derek W. , Kisiel, John B. , Vahdat, Vahab , Ozbay, A. Burak , Limburg, Paul J.

Journal of Medical Economics | September 27, 2023 | Volume: 26 | Issue: 1 | Pages: 1219-1226

10.1080/13696998.2023.2260681 | PMID 37752872 Get It

Advanced Age in Humans and Mouse Models of Glioblastoma Show Decreased Survival from Extratumoral Influence
Johnson, Margaret , Bell, April , Lauing, Kristen L. , Ladomersky, Erik , Zhai, Lijie , Penco-Campillo, Manon , Shah, Yajas , Mauer, Elizabeth , Xiu, Joanne , Drumm, Michael , Elemento, Olivier , Low, Justin , Memon, Ruba , Wu, Jennifer D. , Zhao, Junfei , Mi, Xinlei , Glantz, Michael , Sengupta, Soma , Walunas, Theresa L. , Schiltz, Gary E. , Lukas, Rimas V. , Nicolaides, Theodore , Drumm, Michael , McCortney, Kathleen , Elemento, Olivier , Kim, Miri , Bommi, Prashant , Low, Justin T , Memon, Ruba , Wu, Jennifer , Zhao, Junfei , Mi, Xinlei , Glantz, Michael J , Sengupta, Soma , Castro, Brandyn , Yamini, Bakhtiar , Horbinski, Craig , Baker, Darren J , Walunas, Theresa L , Schiltz, Gary E , Lukas, Rimas V , Wainwright, Derek A , Mauer, Elizabeth , Nicolaides, Theodore , McCortney, Kathleen , Kim, Miri , Bommi, Prashant V. , Horbinski, Craig , Baker, Darren J.

Clinical Cancer Research | September 19, 2023 | Volume: 29 | Issue: 23 | Pages: 4973-4989

10.1158/1078-0432.ccr-23-0834 | PMID 37725593 Get It

Abstract Purpose: Glioblastoma (GBM) is the most common aggressive primary malignant brain tumor in adults with a median age of onset of 68 to 70 years old. Although advanced age is often associated with poorer GBM patient survival, the predominant source(s) of maladaptive aging effects remains to be established. Here, we studied intratumoral and extratumoral relationships between adult patients with GBM and mice with brain tumors across the lifespan. Experimental Design: Electronic health records at Northwestern Medicine and the NCI SEER databases were evaluated for GBM patient age and overall survival. The commercial Tempus and Caris databases, as well as The Cancer Genome Atlas were profiled for gene expression, DNA methylation, and mutational changes with varying GBM patient age. In addition, gene expression analysis was performed on the extratumoral brain of younger and older adult mice with or without a brain tumor. The survival of young and old wild-type or transgenic (INK-ATTAC) mice with a brain tumor was evaluated after treatment with or without senolytics and/or immunotherapy. Results: Human patients with GBM ≥65 years of age had a significantly decreased survival compared with their younger counterparts. While the intra-GBM molecular profiles were similar between younger and older patients with GBM, non-tumor brain tissue had a significantly different gene expression profile between young and old mice with a brain tumor and the eradication of senescent cells improved immunotherapy-dependent survival of old but not young mice. Conclusions: This work suggests a potential benefit for combining senolytics with immunotherapy in older patients with GBM.
TRAPPC6B biallelic variants cause a neurodevelopmental disorder with TRAPP II and trafficking disruptions
Almousa, Hashem , Lewis, Sara A. , Bakhtiari, Somayeh , Nordlie, Sandra H., Pagnozzi, Alex M. , Magee, Helen, Efthymiou, Stéphanie , Heim, Jennifer, Anwar, Najwa, Maqbool, Shazia , Rahman, Fatima , Neilson, Derek , Vemuri, Anusha, Jin, Sheng Chih , Yang, Xiao‐Ru, Heidari, Abolfazl, Trimouille, Aurélien , Thauvin‐Robinet, Christel , Liu, James, Bruel, Ange‐Line , Tomoum, Hoda , Shata, Mennatallah Osama , Hashem, Mais O, Karimiani, Ehsan Ghayoor , Lingappa, Lokesh , Baruah, Debangana, Ebrahimzadeh, Farnoosh , Van‐Gils, Julien , Faivre, Laurence , Galehdari, Hamid, Sadeghian, Saeid , Mohammad, Rahema, Smagt, Jasper J. van der , Qari, Alya , Akar, Halil Tuna , Bilgüvar, Kaya , Mignot, Cyril , Keren, Boris , Raveli, Claudia, Afenjar, Alexandra , Kaat, Laura Donker , Slegtenhorst, Marjon van, Alkuraya, Fowzan S. , Houlden, Henry , Padilla‐Lopez, Sergio , Maroofian, Reza , Sacher, Michael , Kruer, Michael C. , Cornejo, Patricia , Jin, Sheng Chih , Zamani, Mina , Sadeghian, Saeid , Alkuraya, Fowzan S , Houlden, Henry , Maroofian, Reza , Sacher, Michael , Faivre, Laurence , Donker Kaat, Laura , Zaki, Maha S. , Gassen, Koen L.I. van , Hashem, Mais O, Toosi, Mehran Beiraghi , Yeşil, Gözde , Galehdari, Hamid , Shariati, Gholamreza , Vincent, John B. , Innes, A. Micheil , Dursun, Ali , Özgül, Rıza Köksal , Bürglen, Lydie

Brain | September 15, 2023 | Volume: 147 | Issue: 1 | Pages: 311-324

10.1093/brain/awad301 | PMID 37713627 Get It

Abstract Highly conserved transport protein particle (TRAPP) complexes regulate subcellular trafficking pathways. Accurate protein trafficking has been increasingly recognized to be critically important for normal development, particularly in the nervous system. Variants in most TRAPP complex subunits have been found to lead to neurodevelopmental disorders with diverse but overlapping phenotypes. We expand on limited prior reports on TRAPPC6B with detailed clinical and neuroradiologic assessments, and studies on mechanisms of disease, and new types of variants. We describe 29 additional patients from 18 independent families with biallelic variants in TRAPPC6B. We identified seven homozygous nonsense (n = 12 patients) and eight canonical splice-site variants (n = 17 patients). In addition, we identified one patient with compound heterozygous splice-site/missense variants with a milder phenotype and one patient with homozygous missense variants. Patients displayed non-progressive microcephaly, global developmental delay/intellectual disability, epilepsy and absent expressive language. Movement disorders including stereotypies, spasticity and dystonia were also observed. Brain imaging revealed reductions in cortex, cerebellum and corpus callosum size with frequent white matter hyperintensity. Volumetric measurements indicated globally diminished volume rather than specific regional losses. We identified a reduced rate of trafficking into the Golgi apparatus and Golgi fragmentation in patient-derived fibroblasts that was rescued by wild-type TRAPPC6B. Molecular studies revealed a weakened interaction between mutant TRAPPC6B (c.454C>T, p.Q152*) and its TRAPP binding partner TRAPPC3. Patient-derived fibroblasts from the TRAPPC6B (c.454C>T, p.Q152*) variant displayed reduced levels of TRAPPC6B as well as other TRAPP II complex-specific members (TRAPPC9 and TRAPPC10). Interestingly, the levels of the TRAPPC6B homologue TRAPPC6A were found to be elevated. Moreover, co-immunoprecipitation experiments showed that TRAPPC6A co-precipitates equally with TRAPP II and TRAPP III, while TRAPPC6B co-precipitates significantly more with TRAPP II, suggesting enrichment of the protein in the TRAPP II complex. This implies that variants in TRAPPC6B may preferentially affect TRAPP II functions compared to TRAPP III functions. Finally, we assessed phenotypes in a Drosophila TRAPPC6B-deficiency model. Neuronal TRAPPC6B knockdown impaired locomotion and led to wing posture defects, supporting a role for TRAPPC6B in neuromotor function. Our findings confirm the association of damaging biallelic TRAPPC6B variants with microcephaly, intellectual disability, language impairments, and epilepsy. A subset of patients also exhibited dystonia and/or spasticity with impaired ambulation. These features overlap with disorders arising from pathogenic variants in other TRAPP subunits, particularly components of the TRAPP II complex. These findings suggest that TRAPPC6B is essential for brain development and function, and TRAPP II complex activity may be particularly relevant for mediating this function.
Disparities in Offering Enrollment in Remote Patient Monitoring for COVID-19
Thompson, Joshua A. , Hersch, Derek , Kasozi, Ramla N. , Miner, Michael H. , Adam, Patricia

Telemedicine and e-Health | September 14, 2023 | Volume: 30 | Issue: 3 | Pages: 715-721

10.1089/tmj.2023.0150 | PMID 37707989 Get It

Evaluation of the Electronic Clinical Dementia Rating for Dementia Screening
Nosheny, Rachel L. , Yen, Daniel , Howell, Taylor, Camacho, Monica R. , Moulder, Krista L., Gummadi, Shilpa, Bui, Chau, Kannan, Sandhya, Ashford, Miriam T. , Knight, Kristen, Mayo, Connie, McMillan, M. G., Petersen, Ronald C. , Roberson, Erik D. , Chambless, Carol, Gersteneker, Adam, Martin, Roy C. , Kennedy, Richard , Kukull, Walter A. , Flenniken, Derek , Fockler, Juliet , Truran, Diana , Mackin, R. Scott , Weiner, Michael W. , Morris, John C. , Li, Yan , Stricker, Nikki H. , Roberson, Erik , Kennedy, Richard E , Morris, John C , McMillan, Maureen, Zhang, Yue

JAMA Network Open | September 14, 2023 | Volume: 6 | Issue: 9 | Pages: e2333786

10.1001/jamanetworkopen.2023.33786 | PMID 37707812 Get It

Importance The Clinical Dementia Rating (CDR) is a well-validated instrument widely used to detect and stage dementia due to Alzheimer disease. The digital Electronic Clinical Dementia Rating (eCDR) can be remotely self-administered and automatically scored, with potential to facilitate efficient dementia screening and staging. Objective To evaluate the association of the eCDR with the CDR and other in-clinic assessments for screening older adults for cognitive impairment. Design, Setting, and Participants This multisite, cross-sectional study used baseline data from a longitudinal, observational study from 2020 to 2023, including up to 3 years of follow-up. Participants were enrolled from 3 Alzheimer Disease Research Centers and the Brain Health Registry. Participants (aged ≥55 years, with a study partner, and no acute or unstable major medical conditions) were recruited during in-clinic visits or by automated emails. Exposures Participants completed the Uniform Data Set Version 3 (UDS; including the CDR) in supervised clinical research settings, and then completed the eCDR remotely, online and unsupervised, using their own device. Main Outcomes and Measures The primary outcomes were eCDR scores (item; categorical box and global; continuous box and global), CDR scores (item; categorical box and global), and UDS assessment scores. Associations were evaluated using linear and logistic regressions. Results A total of 3565 participants were contacted, and 288 were enrolled. Among 173 participants with item-level data (mean [SD] age, 70.84 [7.65] years; 76 women [43.9%]), eCDR to CDR concordance was 90% or higher for 33 items (63%) and 70% to 89% for 13 items (25%). Box (domain) level concordance ranged from 80% (memory) to 99% (personal care). The global score concordance rate was 81%. κ statistics were fair to moderate. Among 206 participants with box and global scores (mean [SD] age, 71.34 [7.68] years; 95 women [46.1%]), eCDR continuous global score was associated with CDR global (categorical) score with an area under the receiver operating characteristic curve of 0.79 (95% CI, 0.70-0.87). Correlations between eCDR and in-clinic UDS assessments were similar to those between CDR sum of box scores and the same in-clinic assessments. Conclusions and Relevance These findings suggest that the eCDR is valid and has potential use for screening and assessment of older adults for cognitive and functional decline related to Alzheimer disease. Instrument optimization and validation in diverse cohorts in remote settings are crucial for evaluating scalability and eCDR utility in clinical research, trials, and health care settings.
Teaching NeuroImage: Pachymeningitis and Aortitis as the Initial Presentation of Granulomatosis With Polyangiitis
Li, Xiaoyang , Stitt, Derek , Dubey, Divyanshu , Carabenciov, Ivan D. , Dubey, Divyanshu , Lanzino, Giuseppe , Giannini, Caterina

Neurology | August 31, 2023 | Volume: 101 | Issue: 21 | Pages: 979-980

10.1212/wnl.0000000000207762 | PMID 37652705 Get It

Angiographic cross-filling between inferior petrosal sinuses and alteration of adrenocorticotropic hormone sampling results for tumor localization in Cushing disease
O’Keeffe, Derek T. , Atkinson, John L. D., Meyer, Fredric B. , Rinaldo, Lorenzo , Cloft, Harry J. , O'Keeffe, Derek, Martini, Michael L. , Ransom, Ryan C. , Rechberger, Julian S. , Young, William F. , Carlstrom, Lucas P. , Gompel, Jamie J. Van

Journal of Neurosurgery | August 12, 2023 | Volume: 140 | Issue: 2 | Pages: 386-392

10.3171/2023.6.jns2320 | PMID 37877973 Get It

OBJECTIVE Inferior petrosal sinus (IPS) sampling (IPSS) is a diagnostic procedure used to guide diagnostic localization of imaging-negative adrenocorticotropic hormone (ACTH)–secreting pituitary microadenomas. However, the efficacy of IPSS has been suboptimal at accurately lateralizing the adenoma, reducing surgical cure rates and leading to unintended pituitary dysfunction due to the added exploration. One rationale for the occasional imprecision is the existence of additional petrosal sinus collateral channels that connect the IPS bilaterally, which may lead to false localization results during sampling. The aim of this study was to explore a potential connection between normal anatomical variation in the angioarchitecture of the IPSs and the ACTH results obtained in subsequent IPSS tests. METHODS A retrospective review was performed on all cases between 1998 and 2013 involving patients at a single institution who underwent IPSS for radiographically equivocal pituitary microadenomas. Cases were reviewed for tumor laterality noted on either operative or pathology reports, as well as the presence of angiographic evidence of cross-filling between the sinuses. In addition, ACTH levels from the right and left IPSs were documented at baseline and at 2, 5, and 10 minutes after corticotropin-releasing hormone (CRH) administration. A ratio of the change in ACTH levels measured at the time of maximal response (10 minutes) versus the levels measured at the initial response (2 minutes) was computed for each patient and compared between patients by their angiographic cross-filling status. RESULTS There were 41 patients with a histopathologically confirmed right- or left-sided ACTH-secreting pituitary microadenoma who underwent preoperative IPSS. Among these patients, 28 (68%) showed angiographic evidence of cross-filling between the IPSs, and 13 showed no cross-filling. On average, ACTH levels increased by a factor of 3.91 ± 0.77 in the contralateral IPS in patients with angiographic cross-filling, compared with a factor increase of only 1.80 ± 0.27 in patients without cross-filling (p = 0.014). In comparison, ACTH levels increased by a factor of 2.01 ± 0.57 in the ipsilateral IPS in patients with cross-filling, and by 8.78 ± 7.30 in those without cross-filling (p = 0.373). CONCLUSIONS The presence of angiographic cross-filling, suggestive of a greater degree of vascular channel networking between the right and left IPS, is a significant factor influencing the measured rates of change of ACTH in IPSS and may impact the specificity of this test to accurately determine microadenoma laterality in the preoperative setting.
Powassan Virus Encephalitis: A Tertiary Center Experience
Mendoza, Maria A. , Hass, Reece, Vaillant, James J. , Theel, Elitza S. , Toledano, Michel , Saleh, Omar Abu , Mendoza, Maria Alejandra , Vaillant, James, Abu Saleh, Omar , Johnson, Derek R.

Clinical Infectious Diseases | August 3, 2023 | Volume: 78 | Issue: 1 | Pages: 80-89

10.1093/cid/ciad454 | PMID 37540989 Get It

Abstract Background Powassan virus (POWV) is an emerging arthropod-borne flavivirus, transmitted by Ixodes spp. ticks, which has been associated with neuroinvasive disease and poor outcomes. Methods A retrospective study was conducted at Mayo Clinic from 2013 to 2022. We included clinical and epidemiologic data of probable and confirmed neuroinvasive POWV cases. Results Sixteen patients with neuroinvasive POWV were identified; their median age was 63.2 years, and 62.5% were male. Six patients presented with rhombencephalitis, 4 with isolated meningitis, 3 with meningoencephalitis, 2 with meningoencephalomyelitis, and 1 with opsoclonus myoclonus syndrome. A median time of 18 days was observed between symptom onset and diagnosis. Cerebrospinal fluid analysis showed lymphocytic pleocytosis with elevated protein and normal glucose in the majority of patients. Death occurred within 90 days in 3 patients (18.8%), and residual neurologic deficits were seen in 8 survivors (72.7%). Conclusions To our knowledge, this is the largest case series of patients with neuroinvasive POWV infection. We highlight the importance of a high clinical suspicion among patients who live in or travel to high-risk areas during the spring to fall months. Our data show high morbidity and mortality rates among patients with neuroinvasive disease.