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Walker, Denise L.

Mayo Clinic

Mayo Clinic

Citations 5

DNA Methylation Profiling: Comparison of Genome-Wide Sequencing Methods and the Infinium Human Methylation 450 Bead Chip
Walker, Denise L., Bhagwate, Aditya , Baheti, Saurabh , Smalley, Regenia L., Hilker, Christopher A., Sun, Zhifu , Cunningham, Julie M. , Bhagwate, Aditya Vijay, Sun, Zhifu

Epigenomics | July 20, 2015 | Volume: 7 | Issue: 8 | Pages: 1287-1302

10.2217/epi.15.64 Get It

Relationship of Genetic Variation in the Serotonin Transporter Gene ( SLC6A4 ) and Congenital and Acquired Cardiovascular Diseases
Moyer, Ann M. , Walker, Denise L., Avula, Rajeswari, Kung, Simon , Bryant, Sandra C. , Edwards, Kelly K., Black, John L. , Karpyak, Victor M. , Shinozaki, Gen , Jowsey‐Gregoire, Sheila G. , Ehlers, Shawna L. , Romanowicz, Magdalena , Litzow, Mark R. , Rundell, James R., Hooten, W. Michael , Baudhuin, Linnea M. , Lapid, Maria I. , Hogan, William J. , Karpyak, Victor

Genetic Testing and Molecular Biomarkers | February 11, 2015 | Volume: 19 | Issue: 3 | Pages: 115-123

10.1089/gtmb.2014.0250 Get It

Association of the PDYN gene with alcohol dependence and the propensity to drink in negative emotional states
Karpyak, Victor M. , Winham, Stacey J. , Preuss, Ulrich W. , Zill, Peter , Cunningham, Julie M. , Walker, Denise L., Lewis, Kriste A., Geske, Jennifer R. , Colby, Colin , Hall‐Flavin, Daniel K., Loukianova, Larissa L., Schneekloth, Terry D. , Frye, Mark A. , Bazov, Igor , Heit, John A. , Bakalkin, Georgy , Mrazek, David A. , Abulseoud, Osama A. , Biernacka, Joanna M. , Winham, Stacey J , Karpyak, Victor , Bakalkin, Georgy , Geske, Jennifer

International Journal of Neuropsychopharmacology | October 29, 2012 | Volume: 16 | Issue: 5 | Pages: 975-985

10.1017/s1461145712001137 Get It

AbstractSynthetic κ-opioid receptor (KOR) agonists induce dysphoric and pro-depressive effects and variations in the KOR (OPRK1) and prodynorphin (PDYN) genes have been shown to be associated with alcohol dependence. We genotyped 23 single nucleotide polymorphisms (SNPs) in the PDYN and OPRK1 genes in 816 alcohol-dependent subjects and investigated their association with: (1) negative craving measured by a subscale of the Inventory of Drug Taking Situations; (2) a self-reported history of depression; (3) the intensity of depressive symptoms measured by the Beck Depression Inventory-II. In addition, 13 of the 23 PDYN and OPRK1 SNPs, which were previously genotyped in a set of 1248 controls, were used to evaluate association with alcohol dependence. SNP and haplotype tests of association were performed. Analysis of a haplotype spanning the PDYN gene (rs6045784, rs910080, rs2235751, rs2281285) revealed significant association with alcohol dependence (p = 0.00079) and with negative craving (p = 0.0499). A candidate haplotype containing the PDYN rs2281285-rs1997794 SNPs that was previously associated with alcohol dependence was also associated with negative craving (p = 0.024) and alcohol dependence (p = 0.0008) in this study. A trend for association between depression severity and PDYN variation was detected. No associations of OPRK1 gene variation with alcohol dependence or other studied phenotypes were found. These findings support the hypothesis that sequence variation in the PDYN gene contributes to both alcohol dependence and the induction of negative craving in alcohol-dependent subjects.
CYP2D6*11 and Challenges in Clinical Genotyping of the Highly Polymorphic CYP2D6 Gene
Skierka, Jennifer M., Walker, Denise L., Peterson, Sandra E. , O’Kane, Dennis J., Black, John L.

Pharmacogenomics | June 7, 2012 | Volume: 13 | Issue: 8 | Pages: 951-954

10.2217/pgs.12.56 Get It

The Metabolism of Pyrazoloacridine (NSC 366140) by Cytochromes P450 and Flavin Monooxygenase in Human Liver Microsomes
Walker, Denise L., Miller, Jennifer, Benson, Linda M., Tomlinson, Andrew J., Naylor, Stephen , Blajeski, April L., LoRusso, Patricia , Ames, Matthew M. , Reid, Joel M.

Clinical Cancer Research | September 21, 2005 | Volume: 10 | Issue: 4 | Pages: 1471-1480

10.1158/1078-0432.ccr-0557-03 Get It

Abstract Pyrazoloacridine (PZA) is an experimental antitumor agent presently under investigation for treatment of solid tumors on the basis of its unique mechanism of action and selectivity for human solid tumor xenograft in mice. Using capillary electrophoresis coupled with electrospray ionization mass spectrometry, we have identified three oxidative PZA metabolites, 9-desmethyl-PZA, N-demethyl-PZA, and PZA N-oxide. The cytochrome P450 (CYP) isoforms involved in PZA metabolism were characterized by studies with CYP chemical inhibitors, correlation of marker activities for selected CYPs with formation of the metabolites using a human liver panel, and PZA metabolism by cDNA-expressed CYPs. 9-Desmethyl-PZA formation was catalyzed by CYP1A2, whereas N-demethyl-PZA formation was catalyzed by CYP3A4. PZA N-oxide formation was catalyzed by flavin monooxygenase (FMO) rather than CYP, as determined by studies with chemical inhibitors of FMO and metabolism by cDNA-expressed human flavin monooxygenase. After administration of [10b-14C]PZA to mice, six urinary metabolites were detected by high-performance liquid chromatography UV and radiochromatograms including 9-desmethyl-PZA, N-demethyl-PZA, and PZA N-oxide. Trace concentrations of 9-desmethyl-PZA and PZA N-oxide were detected in mouse plasma. PZA N-oxide and N-demethyl-PZA were detected in urine from patients after PZA administration. PZA, 9-desmethyl-PZA, and PZA N-oxide inhibited growth of A375 human melanoma cells. IC50 values were 0.17, 0.11, and 7.0 μm, respectively, for the three molecules.