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Tobin, W. Oliver

https://orcid.org/0000-0002-8141-2394

Mayo Clinic

Mayo Clinic

Citations 123

Correction for: Signatures of cell stress and altered bioenergetics in skin fibroblasts from patients with multiple sclerosis
Wilkins, Jordan, Gakh, Oleksandr , Kabiraj, Parijat, Lucchinetti, Claudia F. , Wilkins, Jordan M, McCarthy, Christina B, McCarthy, Christina B. , Tobin, W. Oliver , Howe, Charles L.

Aging | March 3, 2021 | Volume: 13 | Issue: 5 | Pages: 7707-7707

10.18632/aging.202757 Get It

Abstract PO-023: Differentiation of tumefactive multiple sclerosis and glioblastoma using radiomics features extracted from magnetic resonance imaging and machine learning
Eckel‐Passow, Jeanette E. , Decker, Paul A. , Jenkins, Robert B. , Conte, Gian Marco , Tobin, W. Oliver , Decker, Paul A. , Lachance, Daniel Honore , Erickson, Bradley J.

Clinical Cancer Research | March 1, 2021 | Volume: 27 | Issue: 5_Supplement | Pages: PO-023-PO-023

10.1158/1557-3265.adi21-po-023 Get It

Abstract Introduction Tumefactive multiple sclerosis (MS) and glioblastoma (GBM) can be difficult to differentiate. Clinical presentations are nonspecific and may occur in patients with both diseases. Magnetic resonance imaging (MRI) scans are routinely used to generate an initial differential diagnosis. Although imaging features can help distinguish these entities, there are no pathognomonic signs, neither on traditional nor advanced MRI. Moreover, the ability to differentiate these entities depends on the radiologists’ experience. Ensuring the correct diagnosis has important therapeutic and prognostic implications, as the management of these diseases is very different. To date, a brain biopsy often represents the only option to obtain a diagnosis, but it may be inconclusive and could add unnecessary morbidity. We hypothesize that a machine-learning tool based on routinely performed MRI scans could guarantee a more reliable, fast, and reproducible diagnosis. Methods Only patients with a histological diagnosis were included in the study. Patients that underwent any form of radiation therapy before the surgery were excluded to avoid confounding factors due to treatment-related effects. A total of 99 MS and 257 GBMs were included, and preoperative T2-weighted images were collected. For each patient, the lesions' segmentation was performed, including both the contrast-enhancing and non-enhancing areas of the lesions. The segmentation masks were used to extract radiomic features from the T2-weighted sequences. All MRI images were standardized to the same mean and standard deviation before feature extraction and resampled to a voxel size of 1.0 × 1.0 × 1.0 mm. Features extraction was performed using Pyradiomics (v. 3.0.1) and included first order, shape, and texture features, totaling 100 features. The classifier consisted of a support vector machine (SVM) model. Patients were randomly assigned to the training and test sets with an 80-20% proportion for each class. To select the best hyperparameters for the SVM classifier, a grid-search analysis was performed on the training set using a nested cross-validation scheme (k=5). All experiments were performed using Python (v. 3.5) and the Scikit-learn library (v. 0.23.1). Results The mean accuracy and area under the ROC curve for the best set of hyperparameters on the validation set were 0.83 and 0.86, respectively. The weighted-average precision, recall, and F1 scores on the test set were 0.78, 0.76, and 0.77, respectively. Conclusions Radiomic features extracted from a routinely acquired MRI sequence showed promising results in differentiating tumefactive multiple sclerosis from glioblastoma, opening the possibility to obtain a reliable diagnosis without the need for a brain biopsy. Future experiments Future experiments will focus on using post-contrast T1-weighted images for the radiomic features extractions, testing multiple machine learning models and features selection algorithms, and including more diagnostic classes (i.e., metastasis, lymphomas). Citation Format: Gian Marco Conte, Jeanette E. Eckel-Passow, W. Oliver Tobin, Paul Decker, Daniel H. Lachance, Robert B. Jenkins, Bradley J. Erickson. Differentiation of tumefactive multiple sclerosis and glioblastoma using radiomics features extracted from magnetic resonance imaging and machine learning [abstract]. In: Proceedings of the AACR Virtual Special Conference on Artificial Intelligence, Diagnosis, and Imaging; 2021 Jan 13-14. Philadelphia (PA): AACR; Clin Cancer Res 2021;27(5_Suppl):Abstract nr PO-023.
Single‐agent cladribine as an effective front‐line therapy for adults with Langerhans cell histiocytosis
Goyal, Gaurav , Abeykoon, Jithma P. , Hu, Marie , Call, Timothy G. , Hook, C. Christopher , Pardanani, Animesh , Inwards, David J. , Vassallo, Robert , Ryu, Jay H. , Davidge‐Pitts, Caroline , Ravindran, Aishwarya , Pardanani, Animesh , Inwards, David J , Ryu, Jay H , Ravindran, Aishwarya , Goyal, Guarav , Vassallo, Robert , Hu, Marie , Young, Jason R. , Shah, Meera , Bennani, N. Nora , Tobin, W. Oliver , Koster, Matthew J. , Rech, Karen L. , Go, Ronald S.

American Journal of Hematology | February 7, 2021 | Volume: 96 | Issue: 5 | Pages: No page available

10.1002/ajh.26119 Get It

The Role of Staging Evaluation at Initial Diagnosis of Adult Patients with Clinically Isolated Pulmonary Langerhans Cell Histiocytosis
Ruan, Gordon , Abeykoon, Jithma P. , Scheckel, Caleb , Bennani, Nabila Nora, Hazim, Antonious , Ravindran, Aishwarya , Vassallo, Robert , Ryu, Jay H. , Tobin, W. Oliver , Koster, Matthew J. , Rech, Karen L. , Young, Jason R. , Shah, Meera , Goyal, Gaurav , Go, Ronald S.

Blood | February 7, 2021 | Volume: 136 | Issue: Supplement 1 | Pages: 45-45

10.1182/blood-2020-136861 Get It

Background: Langerhans cell histiocytosis (LCH) is the most common histiocytic disorder that is now recognized as a neoplasm by the World Health Organization. It is generally classified based on the site and extent of disease involvement (single system or multisystem). Pulmonary LCH (pLCH), an uncommon interstitial lung disease associated with smoking, often presents as isolated pulmonary disease. It is unclear whether patients with clinically isolated pLCH have extra-pulmonary lesions at diagnosis or during the course of their disease. The role of [18F] fluorodeoxyglucose positron emission tomography-computed tomography (FDG-PET-CT) in the staging of pLCH remains unclear. Our study aims to better characterize the utility of radiographic staging studies at time of diagnosis and prevalence of extrapulmonary disease at follow up in pLCH. Methods: We conducted a retrospective study of patients presenting with clinical findings consistent with isolated pLCH seen at the Mayo Clinic from January 2000 to January 2020. All patients had a diagnosis of pLCH determined by chest imaging studies [computed tomography (CT) or high-resolution CT (HRCT)] or by histopathologic findings from surgical or transbronchial lung biopsy. Histopathologic findings for the diagnosis of pLCH required the presence of Langerhans cells (S100+/CD1a+/Langerin+). Patients were excluded if they had clinically apparent extra-pulmonary organ involvement at the time of diagnosis. BRAF V600E mutation was determined by immunohistochemistry (IHC) or cell-free DNA (cfDNA). Staging was defined as FDG-PET-CT or whole body CT imaging obtained within 3 months of diagnosis of pLCH. Extra-pulmonary LCH involvement was determined by imaging characteristics or by histopathologic findings. Descriptive statistics and overall survival (OS) were analyzed with JMP software, version 14 (SAS Institute Inc., Cary, NC). Results: A total of 112 patients with clinically isolated pLCH were identified. The median age at diagnosis was 45 years (range 21-73), and 48 (43%) were male. The majority (n=110, 99%) were former or current smokers with a median pack year of 25 (range 1-57). Three (3%) patients were noted to have occupational industrial exposure. Nine patients had a history of another cancer prior to their diagnosis and staging of pLCH [lung (n=4), breast (n=2), neuroendocrine (n=2), thyroid (n=1)]. Presenting symptoms included dyspnea on exertion 49 (44%), cough 18 (16%), chest pain 14 (13%), and 29 (28%) were incidentally discovered on imaging studies. On HRCT, the following characteristics were observed: 42 (38%) cystic, 32 (29%) cystic and nodular, 37 (33%) nodular, 1 (<1%) ground glass opacities. Seventy (63%) patients had lung biopsy confirmation, of which 11 (16%) patients underwent BRAF V600Emutation testing (7 by IHC, 4 by cfDNA). Six (55%) of these 11 patients were positive for BRAF V600E mutation. 34 (30%) patients underwent radiographic staging studies within 3 months of diagnosis of pLCH (25 FDG-PET-CT and 9 whole-body CT), and none of these imaging studies showed evidence of extra-pulmonary disease. Of the patients who had at least one year of follow-up (n=52), one (2%) developed extra-pulmonary disease. This patient did not undergo initial staging studies, developed headaches and was found to have a large calvarial lytic lesion within 2 months of pLCH diagnosis (BRAF V600E+). Among those who did not undergo staging at diagnosis (n=78), long term (>5 years) follow up data were available for 23 (29%), and none developed extra-pulmonary disease as determined by clinical notes or imaging studies. No patient had evidence of new extra-pulmonary involvement or second malignancy at the time of last known follow-up. After a median follow-up duration of 2.4 years (95% CI: 1.5-3.6, range: 0.1-17) ten (9%) patients died, of which 5 died of pLCH related complications. The median OS for entire cohort was 15 years (95% CI 9.1-not reached, Figure 1). Conclusion: Our study shows that adult patients with clinically isolated pLCH rarely present with extra-pulmonary manifestations at diagnosis or at follow up. These findings suggest a limited role of routine radiographic staging studies in pLCH unless clinically indicated. Studies on longer follow up of this cohort would provide further insights into the natural history of pLCH and are underway. Disclosures Bennani: Purdue Pharma: Other: Advisory Board; Verastem: Other: Advisory Board; Kite/Gilead: Research Funding; Affimed: Research Funding. Shah:Dren Bio: Consultancy.
Profile of reticulated platelets in the early, subacute and late phases after transient ischemic attack or ischemic stroke
Lim, Soon Tjin , Tobin, W. Oliver , Murphy, SJX, Kinsella, J. A., Smith, DR, Lim, SY, Murphy, S M, Coughlan, Tara, Collins, Rónán , O’Neill, Desmond , Egan, Bridget, Tierney, Sean , Lim, S T , McCabe, Djh , Tobin, W Oliver , Murphy, S.J.X.

Platelets | December 21, 2020 | Volume: 33 | Issue: 1 | Pages: 89-97

10.1080/09537104.2020.1850670 Get It

Teaching NeuroImages: Brain and Skin Involvement in Erdheim-Chester Disease
Peikert, Johann M., Okuno, Scott H. , Go, Ronald S. , Dubey, Divyanshu , Tobin, W. Oliver , Budhram, Adrian , Go, Ronald S , Tobin, W Oliver , Dubey, Divyanshu , Rech, Karen L.

Neurology | November 10, 2020 | Volume: 96 | Issue: 11 | Pages: No page available

10.1212/wnl.0000000000011159 Get It

Efficacy of BRAF-Inhibitor Therapy in BRAF V600E-Mutated Adult Langerhans Cell Histiocytosis
Hazim, Antonious , Ruan, Gordon , Ravindran, Aishwarya , Abeykoon, Jithma P. , Scheckel, Caleb , Vassallo, Robert , Ryu, Jay H. , Hazim, Antonious Z , Ruan, Gordon J , Goyal, Gaurav , Vassallo, Robert , Ravindran, Aishwarya , Ryu, Jay H , Tobin, W. Oliver , Koster, Matthew J. , Bennani, N. Nora , Rech, Karen L. , Young, Jason R. , Shah, Meera , Goyal, Gaurav , Go, Ronald S.

The Oncologist | September 28, 2020 | Volume: 25 | Issue: 12 | Pages: 1001-1004

10.1002/onco.13541 Get It

Abstract Langerhans cell histiocytosis (LCH) is a rare histiocytic neoplasm. To date, there is a lack of U.S. Food and Drug Administration–approved treatments in adult LCH to establish optimal first-line therapy. We conducted a retrospective, single-center case series evaluating the use of BRAF inhibitors in adult patients with BRAFV600E- LCH proven by biopsy. Our case series is the first to report the use of BRAF inhibitors as first-line therapy in adults with LCH. We also report the efficacy with single-agent dabrafenib in adult LCH. All but one of our patients had favorable response to targeted therapy.
Signatures of cell stress and altered bioenergetics in skin fibroblasts from patients with multiple sclerosis
Wilkins, Jordan, Gakh, Oleksandr , Kabiraj, Parijat, Howe, Charles L. , Lucchinetti, Claudia F. , Wilkins, Jordan M, McCarthy, Christina B, Howe, Charles L , McCarthy, Christina B. , Tobin, W. Oliver

Aging | July 8, 2020 | Volume: 12 | Issue: 14 | Pages: 15134-15156

10.18632/aging.103612 Get It

Low-dose vemurafenib monotherapy in BRAFV600E-mutated Erdheim-Chester disease
Ruan, Gordon , Abeykoon, Jithma P. , Scheckel, Caleb , Vassallo, Robert , Ryu, Jay H. , Tobin, W. Oliver , Ruan, Gordon J , Hazim, Antonious , Scheckel, Caleb J , Tobin, W Oliver , Vassallo, Robert , Ryu, Jay H , Koster, Matthew J. , Bennani, N. Nora , Rech, Karen L. , Young, Jason R. , Shah, Meera , Goyal, Gaurav , Go, Ronald S.

Leukemia & Lymphoma | July 1, 2020 | Volume: 61 | Issue: 11 | Pages: 2733-2737

10.1080/10428194.2020.1783447 Get It