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Jack, Clifford R.

https://orcid.org/0000-0001-7916-622X

Mayo Clinic

Mayo Clinic

Citations 1497

Biochemical and Immunohistochemical Associations of TDP ‐43 and Cryptic RNA With Hippocampal and Amygdala Volumetrics in Alzheimer's Disease
Gatto, Rodolfo G. , Ghayal, Nikhil B , Ayuso, Virginia Estades, Jansen‐West, Karen , Dunmore, Judith A. , Song, Yuping , Yue, Mei, Cook, Casey , DeTure, Michael , Rawlinson, Bailey, Castanedes‐Casey, Monica, Jack, Clifford R., Petersen, Ronald C. , Petrucelli, Leonard, Whitwell, Jennifer L. , Prudencio, Mercedes , Josephs, Keith A. , Youseff, Hossam , Ghayal, Nikhil B , Estades Ayuso, Virginia , Rawlinson, Bailey D, Petersen, Ronald C , Dickson, Dennis W , Whitwell, Jennifer , Josephs, Keith A , Prudencio, Mercedes , Whitwell, Jennifer L , Youssef, Hossam , Castanedes‐Casey, Monica , Jack, Clifford R. , Dickson, Dennis W. , Petrucelli, Leonard

Annals of Neurology | April 9, 2026 | Volume: 100 | Issue: 1 | Pages: 193-205

10.1002/ana.78223 Get It

Objective Immunohistochemically (IHC) measured transactive response DNA‐binding protein 43 (TDP‐43) inclusions are observed in Alzheimer's disease (AD) and are associated with medial temporal lobe atrophy. Accumulation of cryptic exons occurs in AD in response to TDP‐43 pathology. We aimed to assess relationships between IHC and biochemically measured insoluble TDP‐43 and cryptic exons and assess associations with hippocampal and amygdala volume loss and atrophy rates on magnetic resonance imaging (MRI). Methods Eighty‐one neuropathologically diagnosed AD cases were analyzed. For biochemistry, insoluble TDP‐43 was quantified using a Meso‐scale discovery (MSD) immunoassay. IHC‐TDP burden was quantified with digital histopathology. Cryptic RNAs were assessed via quantitative real‐time polymerase chain reaction (qRT‐PCR). Thirty‐eight cases had serial brain MRI. Hippocampal and amygdala volumes were calculated using FreeSurfer. Regression models were used to investigate associations among IHC‐TDP‐43 status/burden, MSD‐TDP status/levels, cryptic RNAs, and hippocampal and amygdala volumes and atrophy rates. Results IHC‐TDP(+) cases exhibited elevated levels of MSD‐TDP and cryptic RNAs ( KCNQ2 , STMN2 , and UNC13A ) and increased MSD‐TDP levels were associated with increased cryptic RNA levels, in the hippocampus and amygdala. IHC‐TDP(+) cases had smaller hippocampal and amygdala volumes compared to IHC‐TDP(−) cases. MSD‐TDP(+) cases had smaller hippocampal volumes and faster amygdala rates of atrophy compared with MSD‐TDP(−) cases. Higher KCNQ2 and UNC13A levels were associated with smaller amygdala volumes. Interpretation MSD‐TDP level is a reliable surrogate for IHC‐based TDP‐43 status. Both TDP‐43 and cryptic RNA levels are associated with reduced medial temporal volumes, suggesting cryptic exons may be playing a role in brain volume loss in AD. ANN NEUROL 2026;100:193–205
Multi-Contrast MRI Inputs Enable Self-Consistent Tissue Segmentation & Robust Perivascular Space Identification
Gunter, Jeffrey L. , Preboske, Gregory M., Persons, Benjamin D., Przybelski, Scott A. , Petersen, Ronald, Jack, Clifford R, Gunter, Jeffrey L , Persons, Benjamin, Schwarz, Christopher G. , Low, Audrey , Vemuri, Prashanthi , Jack, Clifford R.

No container title available | April 7, 2026 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.64898/2026.04.03.716409 Get It

Abstract Different MRI image contrasts are designed to highlight various tissue properties and combining them allows extension of probabilistic segmentation beyond the commonly used “gray-white-CSF” models. This work describes a fully automated method that combines T1-weighted, T2-FLAIR, and conventional T2-weighted images to provide internal consistency across prediction of tissue segmentations including segmentation of superficial and deep gray matter, white matter hyperintensities, and MR-visible perivascular spaces. Results from 773 imaging datasets from 403 participants in the Mayo Clinic Study of Aging and Mayo Clinic Alzheimer’s Disease Research Center (ADRC) are presented.
Breakpoints in Alzheimer's disease biomarkers and cognition across the aging spectrum: The Mayo Clinic Study of Aging
Hu, Mingzhao, Knopman, David S., Therneau, Terry, Fought, Angela J. , Hofrenning, Ekaterina I. , Lowe, Val J., Petersen, Ronald C., Jack, Clifford R., Mielke, Michelle M., Vemuri, Prashanthi, Graff‐Radford, Jonathan, Hofrenning, Ekaterina, Graff-Radford, Jonathan , Hu, Mingzhao, Knopman, David S. , Therneau, Terry, Lowe, Val J. , Petersen, Ronald C. , Algeciras‐Schimnich, Alicia , Jack, Clifford R. , Stricker, Nikki H. , Mielke, Michelle M. , Vemuri, Prashanthi , Graff‐Radford, Jonathan

Alzheimer's & Dementia | April 7, 2026 | Volume: 22 | Issue: 4 | Pages: No page available

10.1002/alz.71227 Get It

Abstract INTRODUCTION We examined when Alzheimer's disease biomarkers become informative by identifying age‐related breakpoints with slope‐changing trajectories. METHODS In 2082 Mayo Clinic Study of Aging participants, we modeled plasma amyloid beta (Aβ)42/40, phosphorylated tau (p‐tau)181, glial fibrillary acidic protein (GFAP), neurofilament light chain (NfL), amyloid/tau positron emission tomography (PET), hippocampal volume (HVa), and global cognition. Generalized additive models described age trends; Davies' test and piecewise linear regression estimated breakpoints. A C2N subsample ( n = 462) provided mass‐spectrometry plasma markers (p‐tau181, p‐tau217, their ratios, Aβ42/40). RESULTS In the full cohort, Aβ42/40, HVa, and cognition declined with age; p‐tau181, NfL, GFAP, and amyloid/tau PET increased. We observed single breakpoints (years, 95% CI): GFAP 68.1 (63.5–71.8), NfL 70.7 (65.9–75.6), p‐tau181 67.2 (60.3–70.3), amyloid PET 62.3 (56.2–69.3), HVa 68.1 (63.1–71.9), cognition 59.8 (55.4–66.0); tau PET showed none. In the mass‐spectrometry subset, p‐tau217 and p‐tau181 broke at 72.6; their ratios and Aβ42/40 showed no breakpoints. DISCUSSION Breakpoints cluster near late midlife, suggesting windows for screening and monitoring.
Comparative effects of TDP-43-A and TDP-43-α on hippocampal subfields and amygdala nuclei
Gatto, Rodolfo G. , Ghayal, Nikhil B , Petersen, R. C., Jack, Clifford R., Reichard, R., Dickson, Dennis W., Whitwell, Jennifer L., Josephs, Keith A. , Youseff, Hossam , Whitwell, Jennifer L , Josephs, Keith A , Youssef, Hossam , Jack, Clifford R. , Reichard, R. Ross, Dickson, Dennis W. , Whitwell, Jennifer L.

Journal of Alzheimer’s Disease | March 16, 2026 | Volume: 110 | Issue: 4 | Pages: 1615-1622

10.1177/13872877261426494 Get It

Transactive response DNA-binding protein of 43 kDa (TDP-43) type-A is associated with frontotemporal lobar degeneration (FTLD). In primary age-related tauopathy (PART), TDP-type-α displays similar features to FTLD-TDP type-A. We compared antemortem MRI volumes of amygdala nuclei and hippocampal subfields between 16 PART-TDP-α and 12 FTLD-TDP-A autopsy-confirmed cases. Hippocampal tail and CA1 body volumes were smaller in PART-TDP-α group, which also had smaller lateral and central amygdala nuclei compared to FTLD-TDP-A group, but differences were non-significant after FDR correction. There is no evidence suggesting that TDP-43 type-A in FTLD affects hippocampal and amygdala volume loss differently than TDP-43 type-α in PART.
FDG-PET imaging to identify brain regions associated with Alzheimer's disease-related TDP-43 proteinopathy: A predictive model using penalized logistic regression analysis
Lavrova, Anna , Satoh, Ryota , Tosakulwong, Nirubol , Weigand, Stephen D. , Jack, Clifford R., Petersen, Ronald C., Reichard, R. Ross, Prudencio, Mercedes , Petrucelli, Leonard, Dickson, Dennis W., Lowe, Val, Whitwell, Jennifer L., Josephs, Keith A. , Lavrova, Anna , Josephs, Keith A , Prudencio, Mercedes , Satoh, Ryota , Jack, Clifford R. , Petersen, Ronald C. , Nguyen, Aivi T. , Reichard, R. Ross , Petrucelli, Leonard , Dickson, Dennis W. , Lowe, Val J. , Whitwell, Jennifer L.

Journal of Alzheimer’s Disease | March 13, 2026 | Volume: 110 | Issue: 3 | Pages: 1086-1098

10.1177/13872877261421241 Get It

Background TAR DNA-binding protein 43 (TDP-43) proteinopathy contributes to Alzheimer's disease progression, but diagnosis remains autopsy-dependent. Objective This study aimed to develop a predictive model using FDG-PET imaging to identify brain regions associated with TDP-43 pathology in vivo. Methods Penalized logistic regression analyzed data from 294 participants and a subset of 159 with Braak and Thal ≥4. Features included FDG standard uptake value ratios (SUVRs) from 123 brain regions and age. Participants were split into training (90%) and testing (10%) datasets, with significant predictors identified by non-zero coefficients at optimal lambda. Results The model achieved 68% accuracy (AUC = 0.70) in 294 participants, highlighting the middle temporal gyrus, parahippocampal gyrus, and hippocampus. In the subset (n = 159), accuracy was 65% (AUC = 0.71), with the medial amygdala and precentral gyrus as key predictors of TDP-43 pathology. Conclusions This study suggests a moderate predictive accuracy of FDG-PET to identify brain regions associated with Alzheimer's disease-related TDP-43 proteinopathy.
Alzheimer's disease Stage 1 and 2: Biology, diagnostics, and treatment
Schindler, Suzanne E., Arias, Jalayne J., Beasley, Brent W. , Farrar, Gill , Fowler, Nicole R., Jack, Clifford R., Jönsson, Linus, Joyce, Geoffrey , Lansdall, Claire J., Maruff, Paul, Mattsson‐Carlgren, Niklas, Mummery, Catherine J. , Murphy, Jennifer, Okhravi, Hamid , Petersen, Ronald C., Raman, Rema, Randolph, Christopher , Sass, Marie Reeberg , Reiman, Eric M., Salvadó, Gemma, Schöll, Michael, Siemers, Eric , Sperling, Reisa A., Thornton‐Wells, Tricia, Tortelli, Rosanna , Tosun, Duygu, Vandevrede, Lawren, Weninger, Stacie, Wessels, Alette M. , Zhou, Jin, Carrillo, Marı́a C., Weber, Christopher J., Carrillo, María C. , Jönsson, Linus , Schindler, Suzanne E. , Hansson, Oskar , Algeciras‐Schimnich, Alicia , Arias, Jalayne J. , Fowler, Nicole R. , Hartz, Sarah M. , Jack, Clifford R. , Maruff, Paul , Mattsson, Niklas , Murphy, Jennifer, Petersen, Ronald C. , Raman, Rema , Reiman, Eric M. , Salvadó, Gemma , Sperling, Reisa Anne , Thornton‐Wells, Tricia A., VandeVrede, Lawren , Villain, Nicolas , Zhou, Jin

Alzheimer's & Dementia: Translational Research & Clinical Interventions | March 12, 2026 | Volume: 12 | Issue: 1 | Pages: No page available

10.1002/trc2.70216 Get It

Abstract Advances in biomarker technology, digital cognitive assessments, and amyloid‐targeting therapies have redefined the opportunities for accurate and early diagnosis and care of Alzheimer's disease (AD). These advances also create new possibilities for intervention before the onset of cognitive impairment. This paradigm shift has increased the focus on Stages 1 and 2 of AD, in which individuals are cognitively unimpaired but exhibit biological evidence of disease. While early identification of AD offers an opportunity to intervene early to delay progression and preserve quality of life, it also presents complex challenges related to communicating diagnostic results to patients and their families, contextualizing the cost effectiveness of early diagnosis and treatment, and implementation of and equitable access to treatments. Recent, successfully enrolled, preclinical AD trials highlight the complex strategies required to identify asymptomatic, biomarker‐positive individuals on a large scale, and demonstrate critical knowledge gaps in inclusion, follow‐up, and long‐term outcome measurement. The Spring 2025 Alzheimer's Association Research Roundtable (AARR) meeting brought together academics, clinicians, industry, and regulatory leaders to exchange perspectives on current challenges, key learnings, and potential strategies for identifying and treating individuals in very early stages of AD, effectively and safely. This paper presents key takeaways from the Spring 2025 AARR meeting. Highlights New criteria for Alzheimer's disease (AD) enable early identification of AD pathology. Blood tests and digital cognitive assessment tools may facilitate early and personalized care. Plasma biomarkers may be scalable in clinical settings but need confirmation or follow‐up assessments in those individuals with equivocal results. Early therapy shows best results in people with lower initial amyloid and tau burden.
Tau PET overlap index correlation with neuropathological findings
Lim, Seokbeen , Lee, Jeyeon, Min, Paul H., Mester, Carly , Ghatamaneni, Sujala, Senjem, Matthew L., Botha, Hugo, Knopman, David S., Ramanan, Vijay K., Savica, Rodolfo, Fields, Julie A. , Machulda, Mary M., Dickson, Dennis W., Reichard, R. Ross, Graff‐Radford, Jonathan, Schwarz, Christopher G., Gunter, Jeffrey L. , Kantarci, Kejal, Boeve, Bradley, Vemuri, Prashanthi, Jones, D., Jack, Clifford R., Petersen, Ronald C., Murray, Melissa E., Lowe, Val J., Min, Hoon‐Ki , Lim, Seokbeen , Moloney, Christina M. , Mester, Carly T, Lowe, Val J , Min, Hoon-Ki Paul , Lee, Jeyeon, Senjem, Matthew L. , Botha, Hugo , Knopman, David S. , McCarter, Stuart J. , Ramanan, Vijay K. , Savica, Rodolfo , Machulda, Mary M. , Dickson, Dennis W. , Reichard, R. Ross, Nguyen, Aivi T. , Graff‐Radford, Jonathan , Schwarz, Christopher G. , Kantarci, Kejal , Boeve, Bradley, Vemuri, Prashanthi , Jones, David T. , Jack, Clifford R. , Petersen, Ronald C. , Murray, Melissa E. , Lowe, Val J.

Alzheimer's & Dementia | March 8, 2026 | Volume: 22 | Issue: 3 | Pages: No page available

10.1002/alz.71241 Get It

Abstract INTRODUCTION The tau positron emission tomography (PET) overlap index (OI) has shown promise in maximizing signal‐to‐noise for longitudinal tau PET imaging, particularly for early tau pathology, but requires validation against neuropathology. METHODS Fifty‐seven participants who underwent serial tau PET imaging (flortaucipir) and subsequent autopsy were included. Tau PET OI and standardized uptake value ratios (SUVRs) were compared across neuropathological diagnoses. RESULTS Tau PET OI showed greater concordance with neurofibrillary tangle (NFT) severity in the entorhinal cortex (a key region for Alzheimer's disease [AD] tauopathy) than SUVR, particularly in early Braak tangle stages (positivity: 52.2% for OI vs. 13.0% for SUVR). OI detected overlapping tau voxels that exhibited spatial correspondence with immunohistochemical and autoradiography measures of tau deposition across both AD and non‐AD tauopathies. DISCUSSION These findings demonstrate the enhanced capacity of OI in serial tau PET to robustly detect early and spatially localized tau pathology, supporting its application as a sensitive imaging metric in AD and select non‐AD tauopathies.
Hippocampal subfield thickness and shape analysis in examining the impact of TDP‐43 in primary age‐related tauopathy
Gatto, Rodolfo G. , Petersen, Ronald C., Reichard, R. Ross, Jack, Clifford R., Whitwell, Jennifer L., Josephs, Keith A., Youseff, Hossam , Whitwell, Jennifer L , Youssef, Hossam , Petersen, Ronald C. , Reichard, R. Ross, Jack, Clifford R. , Whitwell, Jennifer L. , Josephs, Keith A.

Alzheimer's & Dementia | March 8, 2026 | Volume: 22 | Issue: 3 | Pages: No page available

10.1002/alz.71267 Get It

Abstract INTRODUCTION Hippocampal subfields are vulnerable to the transactive response DNA‐binding protein of 43 kDa (TDP‐43) and tau in primary age‐related tauopathy (PART). Geometry‐based morphometric analysis can improve the detection of structural changes in the hippocampus. METHODS Forty‐seven cases of autopsy‐confirmed PART without TDP‐43 and 19 cases of PART with TDP‐43 underwent antemortem magnetic resonance imaging (MRI) hippocampal segmentation and shape analysis. A separate cohort of 16 younger healthy individuals (YHIs) was included as a reference group. Hippocampal shape was analyzed in Python with non‐parametric cluster permutation testing. RESULTS PART(TDP+) group exhibited thinner left subiculum and CA1, with curvature deformations in left CA1 and CA2/3, relative to PART(TDP–). Both PART groups showed right‐sided predominance of thinning in presubiculum and subiculum, as well as curvature deformations in right presubiculum, subiculum, and CA1 when compared to YHIs. DISCUSSION Geometry‐based analysis showed different patterns of hippocampal thinning and curvature associated with PART(TDP+) compared to PART(TDP–).
Diffusion MRI based biomarkers reveal a Prolonged Pre-Lesional Phase of Cerebral Small Vessel Disease
Vemuri, Prashanthi, Hu, Mingzhao, Kamykowski, Michael G. , Reid, Robert I. , Therneau, Terry M, Raghavan, Sheelakumari, Cogswell, Petrice M., Griswold, Michael, Windham, B. Gwen, Jack, Clifford R., Petersen, Ronald C., Graff-Radford, Jonathan, Raghavan, Sheelakumari , Reid, Robert I , Kamykowski, Michael G , Raghavan, Sheelakumari , Vemuri, Prashanthi , Hu, Mingzhao, Lundt, Emily S. , Therneau, Terry M. , Cogswell, Petrice M. , Windham, B. Gwen , Jack, Clifford R. , Petersen, Ronald C. , Graff‐Radford, Jonathan

No container title available | March 7, 2026 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.64898/2026.03.03.709452 Get It

Abstract Background White matter hyperintensities (WMH) are widely used to assess cerebral small vessel disease (SVD) but reflect late-stage injury. Diffusion MRI based biomarkers have been proposed to capture earlier SVD-related microstructural damage but their temporal progression relative to WMH and the risk factors associated with this progression have not been explored. Methods We analyzed longitudinal neuroimaging data from 2,047 participants from a population-based cohort study (aged 49-101 years, 47% female). Using multi-output nonlinear mixed-effects models, we characterized the temporal progression of WMH and four diffusion MRI based biomarkers: fractional anisotropy of the genu of the corpus callosum (Genu-FA), peak width of skeletonized mean diffusivity (PSMD), free water (FW), and Arteriolosclerosis-score (ARTS). Models incorporated participant-specific time shifts, correlations between biomarkers, and effects of risk factors (sex, education, APOE ε4 status, and cardiometabolic conditions). Results ARTS, Genu-FA, FW, and PSMD became abnormal in 50% of the study population 16, 12, 10, and 7 years before WMH, respectively. Global markers (ARTS, FW, PSMD, WMH) were correlated, indicating shared substrates of widespread white matter injury. Genu-FA, a vascular risk microstructural injury biomarker, was weakly coupled with WMH and had an earlier but more linear worsening across adulthood. Cardiometabolic conditions predicted earlier worsening of all biomarkers. Females showed earlier WMH, Genu-FA, and ARTS abnormalities whereas males exhibited earlier PSMD and FW abnormalities. Conclusions Diffusion MRI based biomarkers capture microstructural injury at least a decade before appearance of WMH, revealing a prolonged phase of early SVD and highlighting their potential for SVD prevention.
Sex-Specific Associations of α-Synuclein Pathology With Tau Accumulation
Fought, Angela J. , Wiste, Heather J. , Przybelski, Scott A. , Reid, Robert I., Schwarz, Christopher G., Vemuri, Prashanthi, Jack, Clifford R., Lowe, Val J., Petersen, Ronald C., Wa, Rocca, Boeve, Bradley F., Kantarci, Kejal, Initiative, Alzheimer’s Disease Neuroimaging, Weiner, Michael W., Aisen, Paul, Beckett, Laurel, Perrin, Richard J., Toga, Arthur W., Saykin, Andrew J., Mak, Elijah , Reid, Robert I. , Schwarz, Christopher G. , Senjem, Matthew L. , Vemuri, Prashanthi , Jack, Clifford R. , Lowe, Val J. , Petersen, Ronald C. , Rocca, Walter A. , Boeve, Bradley F. , Kantarci, Kejal , Initiative, Alzheimer’s Disease Neuroimaging, Weiner, Michael W. , Aisen, Paul, Beckett, Laurel , Perrin, Richard J. , Toga, Arthur W. , Saykin, Andrew J.

JAMA Network Open | March 4, 2026 | Volume: 9 | Issue: 3 | Pages: e260461

10.1001/jamanetworkopen.2026.0461 Get It

Importance Sex differences are increasingly recognized as modifiers of Alzheimer disease and related dementias, with women exhibiting greater tau burden and faster cognitive decline than men. Even though α-synuclein copathology frequently occurs in Alzheimer disease, its contribution to sex differences in disease progression is unclear. Objective To test whether α-synuclein positivity, measured using cerebrospinal fluid seed amplification assay (SAA), is differentially associated with tau accumulation in women vs men across the Alzheimer disease continuum. Design, Setting, and Participants This cohort study used longitudinal tau positron emission tomography from the Alzheimer’s Disease Neuroimaging Initiative collected between 2015 and 2023, with a median (IQR) follow-up of 1.23 (0.00-3.84) years. Participants were stratified by cerebrospinal fluid α-synuclein seed amplification assay status and sex. Participants were cognitively unimpaired or cognitively impaired (mild cognitive impairment or dementia) at baseline. Exposure Cerebrospinal fluid α-synuclein status determined by SAA and dichotomized as SAA negative or SAA positive. Main Outcomes and Measures Tau burden was quantified as standardized uptake value ratio (SUVr) in the medial temporal composite region of interest. Linear mixed-effects models tested SAA by sex by time interactions on longitudinal tau accumulation, adjusting for baseline age, baseline cognitive status, apolipoprotein E ε4 carrier status, and site. Sample size estimates were calculated to detect 25% and 50% treatment effects with 80% power in those with cognitive impairment. Results Among 415 participants (mean [SD] age, 72.3 [7.6] years; 220 women [53%]; 69 SAA positive [17%] and 346 SAA negative [83%]), there was a significant interaction between SAA status, sex, and time on tau accumulation (β, 0.061; 95% CI, 0.030-0.093; P < .001). Women with positive SAA results exhibited the fastest tau accumulation compared with other groups (0.066 SUVr per year; 95% CI, 0.043 to 0.089 SUVr per year; P < .001). Clinical trials targeting tau pathology in cognitively impaired individuals with 18-month follow-up would require 129 SAA-positive women to detect a 25% treatment effect with 80% power, compared with 518 SAA-negative women. Conclusions and Relevance In this cohort study of participants across the Alzheimer disease continuum, α-synuclein copathology was associated with faster tau accumulation in women than men. These findings may inform sex-specific interpretation of α-synuclein biomarkers and trial design.