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Braga Neto, Manuel B

0000-0001-8451-1753

Mayo Clinic

Mayo Clinic

Citations 14

De Novo Crohn's Disease 3 Years Following Immune Checkpoint Inhibitor Therapy
Bell, Matthew G. , Neto, Manuel B. Braga , Kane, Sunanda V. , Braga Neto, Manuel B

ACG Case Reports Journal | April 3, 2025 | Volume: 12 | Issue: 4 | Pages: e00944

10.14309/crj.0000000000000944 Get It

ABSTRACT Presented is a 76-year-old man with metastatic melanoma that was successfully treated with pembrolizumab, an immune checkpoint inhibitor (ICI). He underwent 20 months of ICI treatment without dose limiting side effects. Nearly 18 months after ICI discontinuation, the patient developed intermittent epigastric pain and diarrhea. Owing to mild symptoms, he was not immediately evaluated. Three years after ICI cessation, he was diagnosed with stricturing, jejunal Crohn's disease. He was treated with vedolizumab and displayed clinical and radiographic response to treatment. This case serves as an example of potential gastrointestinal-related, long-term autoimmune implications of ICI therapy, even in patients without acute side effects.
Risk of Primary Gastrointestinal Lymphoma in Patients With Inflammatory Conditions Exposed to Tumor Necrosis Factor Alpha Inhibitors and Immunomodulators: A Case–Control Study
Neto, Manuel B. Braga , Nasser, Jason , Harmsen, William S. , Raffals, Laura E. , Camilleri, Michael , Chedid, Victor , Braga Neto, Manuel B , Harmsen, William Scott, Camilleri, M , Chedid, Victor G , Wang, Xiao Jing

Crohn's & Colitis 360 | February 17, 2024 | Volume: 6 | Issue: 1 | Pages: No page available

10.1093/crocol/otae010 Get It

Abstract Introduction The aim of this case–control study was to determine if exposure to tumor necrosis factor alpha inhibitors (TNFIs) or immunomodulators (thiopurines or methotrexate) was associated with development of primary gastrointestinal lymphoma (PGIL) in patients with chronic inflammatory conditions. Methods Patients with PGIL and controls evaluated at a tertiary care center over 20 years were matched 1:3 using a medical record informatics search engine based on their chronic inflammatory condition (Crohn’s disease [CD], ulcerative colitis [UC], rheumatoid arthritis, ankylosing spondylitis, and psoriatic arthritis) and duration of follow-up. Patients who started on TNFI within 3 months of PGIL diagnosis were excluded. We extracted demographics, medical history, and medications used. Univariate models using conditional logistic regression were used due to the small number of matched pairs. Results Twenty PGIL cases matched with 60 controls were followed for a mean 9.9 ± 6.9 and 9.7 ± 8.6 years, respectively. Mean age at time of PGIL diagnosis was 47.5 ± 22.0 (standard deviation) years and the majority (75%) were males. The most common inflammatory diagnosis was inflammatory bowel disease (80% of cases; 45% with UC and 35% with CD). Development of PGIL was not associated with TNFI (odds ratio [OR] = 2.6; 95% confidence interval [CI] 0.69–11.01; P = .18), but with use of TNFI in combination with thiopurines (OR = 8.93; 95% CI 1.43–80.25; P = .014). Risk of PGIL increased with every additional TNFI (2.277 (1.002–5.713); P = .0494). All cases exposed to multiple TNFI were also exposed to thiopurines. Use of thiopurines (alone or in combination) was the greatest risk factor (OR = 6.32; 95% CI 1.55–37.05; P = 0.006) to develop PGIL. Conclusions TNFI therapy was not associated with increased risk for PGIL unless used in combination with thiopurines and with every switch to a different TNFI.
Hypomethylation and Overexpression of Th17-Associated Genes is a Hallmark of Intestinal CD4+ Lymphocytes in Crohn’s Disease
Neto, Manuel B. Braga , Xiong, Yuning, Bhagwate, Adytia V, Gibbons, Hunter R. , Sagstetter, Mary R., Hamdan, Feda H. , Baheti, Saurabh , Friton, Jessica, Nair, Asha, Ye, Zhenqing, Faubion, William A. , Braga Neto, Manuel B , Sun, Zhifu

Journal of Crohn's and Colitis | June 8, 2023 | Volume: 17 | Issue: 11 | Pages: 1847-1857

10.1093/ecco-jcc/jjad093 Get It

Abstract Background The development of Crohn’s disease [CD] involves immune cell signalling pathways regulated by epigenetic modifications. Aberrant DNA methylation has been identified in peripheral blood and bulk intestinal tissue from CD patients. However, the DNA methylome of disease-associated intestinal CD4+ lymphocytes has not been evaluated. Materials and Methods Genome-wide DNA methylation sequencing was performed from terminal ileum CD4+ cells from 21 CD patients and 12 age- and sex-matched controls. Data were analysed for differentially methylated CpGs [DMCs] and methylated regions [DMRs]. Integration was performed with RNA-sequencing data to evaluate the functional impact of DNA methylation changes on gene expression. DMRs were overlapped with regions of differentially open chromatin [by ATAC-seq] and CCCTC-binding factor [CTCF] binding sites [by ChIP-seq] between peripherally derived Th17 and Treg cells. Results CD4+ cells in CD patients had significantly increased DNA methylation compared to those from the controls. A total of 119 051 DMCs and 8113 DMRs were detected. While hypermethylated genes were mostly related to cell metabolism and homeostasis, hypomethylated genes were significantly enriched within the Th17 signalling pathway. The differentially enriched ATAC regions in Th17 cells [compared to Tregs] were hypomethylated in CD patients, suggesting heightened Th17 activity. There was significant overlap between hypomethylated DNA regions and CTCF-associated binding sites. Conclusions The methylome of CD patients shows an overall dominant hypermethylation yet hypomethylation is more concentrated in proinflammatory pathways, including Th17 differentiation. Hypomethylation of Th17-related genes associated with areas of open chromatin and CTCF binding sites constitutes a hallmark of CD-associated intestinal CD4+ cells.
Multicentre Real-world Experience of Upadacitinib in the Treatment of Crohn’s Disease
Chugh, Rishika , Neto, Manuel B. Braga , Fredrick, Thomas , Terdiman, Jonathan P., El‐Nachef, Najwa , Loftus, Edward V. , Mahadevan, Uma , Kane, Sunanda V. , Braga Neto, Manuel B , Fredrick, Thomas W , Loftus, Edward V , Mahadevan, Uma , Kane, S , Ramos, Guilherme Piovezani

Journal of Crohn's and Colitis | October 22, 2022 | Volume: 17 | Issue: 4 | Pages: 504-512

10.1093/ecco-jcc/jjac157 Get It

Abstract Background Upadacitinib is a selective Janus kinase inhibitor approved for the management of ulcerative colitis and is under evaluation for the management of Crohn’s disease [CD] in Phase 3 clinical trials. Aims Our goal was to describe our real-world experience with upadacitinib in CD. Methods This is a two-centre retrospective cohort study of adult patients with moderate to severe CD on upadacitinib. The primary outcome was clinical response and remission as determined by stool frequency and abdominal pain scores. Secondary endpoints included endoscopic response and remission as determined by change in Simple Endoscopic Score for CD. Outcomes were assessed at 3 months after starting upadacitinib and at the patient’s most recent follow-up. We further evaluated adverse events and dose-related response. Results A total of 45 CD patients received upadacitinib and were included in the safety analysis. Thirty-six patients received upadacitinib for CD, whereas nine received it for inflammatory arthritis [n = 8] or pyoderma [n = 1]. Thirty-three patients received upadacitinib for 3 months or longer and were included in the efficacy analysis. At the 3-month follow-up, 21 patients achieved clinical response [63.6%] and nine achieved clinical remission [27.2%]. At time of last follow-up, 23 patients had clinical response [69.7%], ten achieved clinical remission [30.3%] and four [28.6%] achieved endoscopic remission. Adverse events occurred in 12 patients [26.7%]. Two patients had a serious adverse event [4.5%] without associated mortality. Conclusion In this real-world cohort of highly refractory CD patients, upadacitinib was effective in inducing remission and had an acceptable safety profile.
Detection of Anal Intraepithelial Neoplasia and Anal Squamous Cell Carcinoma on Colonoscopy
Voss, Jordan K. , Kurdi, Ahmed T. , Neto, Manuel B. Braga , Chedid, Victor , Neto, Manuel Braga, Chedid, Victor G , Braga Neto, Manuel B , Wang, Xiao‐Jing

ACG Case Reports Journal | June 22, 2022 | Volume: 9 | Issue: 6 | Pages: e00792

10.14309/crj.0000000000000792 Get It

ABSTRACT The purpose of this case series is to review the endoscopic detection of anal intraepithelial neoplasia and anal squamous cell carcinoma including the role of rectal retroflexion and narrow-band imaging. Four cases of anal intraepithelial neoplasia were incidentally discovered in women aged 55–71 years. Anal lesions identified included sessile polyps, nodular mucosa, and circumferential polyps. A fifth patient, who presented with abdominal pain, was found to have a 3 cm anal squamous cell carcinoma on diagnostic colonoscopy, despite a negative colonoscopy 21 months earlier. In the absence of contraindications, retroflexion should be performed on all patients. Suspicious anal mucosa warrants biopsy.
Clinical Course and Impact of Immune Checkpoint Inhibitor Colitis Resembling Microscopic Colitis
Fredrick, Thomas , Ramos, Guilherme Piovezani , Neto, Manuel B. Braga , Kane, Sunanda V. , Faubion, William A. , Loftus, Edward V. , Pardi, Darrell S. , Pasha, Shabana F., Farraye, Francis A. , Zhang, Lizhi , Raffals, Laura E. , Fredrick, Thomas W , Ramos, Guilherme P , Braga Neto, Manuel B , Kane, S , Loftus, Edward V , Farraye, Francis A

Crohn's & Colitis 360 | March 14, 2022 | Volume: 4 | Issue: 2 | Pages: No page available

10.1093/crocol/otac008 Get It

Abstract Background Microscopic colitis (MC) is suspected to result from increased immune activity in gut mucosa. Immune checkpoint inhibitors (ICIs) treat cancer by activating the immune system, and further investigation is needed regarding their role in the development of MC. Methods A retrospective case series investigated cases of endoscopically and histologically confirmed MC developing after administration of ICIs. Clinical notes and medication administration records were reviewed for demographics, symptom duration, and treatment response. Results Nineteen cases of de novo MC were identified, with 95% of cases requiring steroid treatment, 53% presenting with hospitalization, and colitis-related mortality in 1 individual. Symptom onset occurred a median of 160 days after initiation of ICI therapy and 53 days after their most recent dose of therapy. Patients had a median of 125 days of symptoms, and ICI therapy was held in 70% of individuals due for treatment. Conclusions MC can develop after ICI administration, and presents with severe symptoms, often requiring hospitalization and steroid treatment. In certain individuals this can require a prolonged treatment course of steroid therapy or immunomodulators. Individuals developing diarrhea after ICI therapy warrant thorough workup including endoscopy and rapid treatment initiation given the disease severity observed in this series.
Calm before the Storm
Neto, Manuel B. Braga , Badley, Andrew D. , Parikh, Sameer A., Graham, Rondell P., Kamath, Patrick S., Braga Neto, Manuel B , Badley, Andrew D , Parikh, Sameer A., Graham, Rondell P., Kamath, Patrick S.

New England Journal of Medicine | February 2, 2022 | Volume: 386 | Issue: 5 | Pages: 479-485

10.1056/nejmcps2111163 Get It

Turning Purple with Pain
Fredrick, Thomas , Neto, Manuel B. Braga , Johnsrud, Daniel O. , Camilleri, Michael , Chedid, Victor , Fredrick, Thomas W , Braga Neto, Manuel B, Chedid, Victor G , Braga Neto, Manuel B

New England Journal of Medicine | August 4, 2021 | Volume: 385 | Issue: 6 | Pages: 549-554

10.1056/nejmcps2105278 Get It

Letter: safety of immune checkpoint inhibitors in patients with pre‐established microscopic colitis—a single‐centre experience
Fredrick, Thomas , Neto, Manuel B. Braga , Ramos, Guilherme Piovezani , Kane, Sunanda V. , Pardi, Darrell S. , Raffals, Laura E. , Fredrick, Thomas W , Braga Neto, Manuel B, Ramos, Guilherme P, Kane, S , Braga Neto, Manuel B , Ramos, Guilherme P

Alimentary Pharmacology & Therapeutics | June 25, 2021 | Volume: 54 | Issue: 2 | Pages: 217-218

10.1111/apt.16458 Get It

LINKED CONTENT This article is linked to Meserve et al paper. To view this article, visit https://doi.org/10.1111/apt.16217
Certolizumab Trough Levels and Antibodies in Crohn Disease: A Single-Center Experience
Ramos, Guilherme Piovezani , Al‐Bawardy, Badr , Neto, Manuel B. Braga , Bledsoe, Adam C. , Quinn, Kevin P. , Heron, Valérie , Johnson, Amanda M. , Chedid, Victor , Papadakis, Konstantinos A. , Pardi, Darrell S. , Kane, Sunanda V. , Tremaine, William J., Raffals, Laura E. , Bruining, David H. , Faubion, William A. , Harmsen, William S. , Loftus, Edward V. , Braga Neto, Manuel Bonfim, Johnson, Amanda , Chedid, Victor G , Pardi, Darrell, Kane, S , Raffals, Laura , Loftus, Edward V , Braga Neto, Manuel B , Ramos, Guilherme P , Willrich, Maria Alice V. , Coelho–Prabhu, Nayantara , Kisiel, John B.

Crohn's & Colitis 360 | March 3, 2021 | Volume: 3 | Issue: 3 | Pages: No page available

10.1093/crocol/otab019 Get It

Abstract Background Certolizumab pegol (CZP) has been successfully used for the treatment of Crohn disease (CD); however, real-world data regarding the utility of CZP trough levels (CTLs) are lacking. We aimed to correlate CTL with CD outcomes and to determine frequency of CZP antibodies. Methods Retrospective evaluation of all CD patients on maintenance CZP with CTL obtained between 2016 and 2019. Outcomes included: median CTL, presence of anti-CZP antibodies, biochemical response (BR), clinical response (CR), radiologic response (RR), radiologic healing (RH), and mucosal healing (MH). Results Seventy-seven CD patients were included. Median CTL was 18.9 µg/mL (interquartile range, 7.6–35.4). Twenty-three patients (27.3%) had positive antibody levels, with lower median CTL compared to patients with no antibodies (0.0 vs 29.8; P < 0.0001). Median CTL levels were higher in patients with vs without CR (30.4 vs 10.3 µg/mL; P = 0.0015) and RR (29.6 vs 5.8 µg/mL; P = 0.006). CZP dosing at least every 2 weeks was associated with higher odds of achieving MH (odds ratio, 3.2; 95% confidence interval, 1.03–9.97). CTL resulted in change in clinical management in 62.7% of cases and presence of CMZ antibodies was associated with an odds ratio of 5.83 (95% confidence interval, 1.57–21.73) of change in management. Receiver operating characteristic curve and quartile analysis suggested that CTL >19 µg/mL is associated with increased rates of CR and RR. Conclusions Higher CTL was significantly associated with CR and RR. The rate of CZP antibodies was 27.3%. Our data suggest maintenance CTL of ≥19 µg/mL should be achieved in order to optimize outcomes in clinical practice.