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Demirer, Mutlu

https://orcid.org/0000-0002-6842-282X

Mayo Clinic

Mayo Clinic in Florida

Citations 11

AI-Enabled Chest X-Ray Detects Subclinical Diastolic Dysfunction in Diabesity and its Therapeutic Responses to GLP-1 or GLP-1/GIP Receptor Agonists
Demirer, Mutlu , Erdal, Barbaros S. , Lin, Grace , White, Richard D. , Lin, Grace

No container title available | April 5, 2026 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.21203/rs.3.rs-9272120/v1 Get It

Abstract Introduction The evaluation of diastolic function in diabesity patients undergoing incretin-based therapy could facilitate early detection and help prevent progression to heart failure. Methodology A group of 15 diabesity cases with chest x-ray examinations (< 1 month) before and after ≥ 12 months of incretin-based therapy (absent ventricular/valvular dysfunction) were identified. Standard diabesity descriptors and predictions of pulmonary venous hypertension (aka “pulmonary congestion”) [None; Stage 1: vascular distention/redistribution but minimal interstitial edema; or Stage ≥ 2: vascular congestion with ≥ mild interstitial or alveolar edema] by validated AI-enabled chest x-ray staging, representing mean left atrial pressure in diastolic dysfunction, were evaluated pre- and post-therapy. Results By weight loss, cases clustered into equal-sized subgroups: 1. Significant Responders (9–30% decreases); 2. Insignificant Responders (0–2% decreases); and 3. Non-Responders (2–12% increases). Regarding hemoglobin A1c changes: 1. Significant Responders collectively decreased; 2. Insignificant Responders varied; and 3. Non-Responders were largely stable. Pre-therapy, all 15 cases demonstrated AI-enabled chest x-ray evidence of diastolic dysfunction; post-therapy, 4 improved (especially cases of greatest weight loss or hemoglobin A1c reduction), 5 were stable, and 6 worsened. Per subgroup, AI-enabled chest x-ray indications therapeutic response were: 1. Significant Responders (all demonstrating unequivocally decreased obesity and improved diabetes) collectively showed stable-decreased dysfunction; 2. Insignificant Responders (all demonstrating minimally decreased obesity but stable-worsening diabetes in most) reflected stable-increased dysfunction in 60%; and 3. Non-Responders (all demonstrating increased obesity but stable-improved diabetes) showed increased dysfunction in 80%. Conclusion AI-enabled CXR staging detects background subclinical diastolic dysfunction in diabesity and monitors its response to incretin-based therapy.
Automated Prediction of Radiological Protocols Using Retrieval Augmented Generation
Testagrose, Conrad , Korfiatis, Panagiotis , Kline, Timothy L. , Benfield, Justin D., Cook, Cole J. , Merkel, Peggy S., Demirer, Mutlu , Bolan, Candice W. , Erdal, Barbaros S. , Benfield, Justin D., Merkel, Peggy S., White, Richard

No container title available | September 17, 2025 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.21203/rs.3.rs-7623430/v1 Get It

Abstract Radiological protocol selection is a critical but time-consuming step in clinical workflow, requiring radiologists to match patient indications with the appropriate MRI or CT protocol. Manual selection can be prone to delays or potential errors, and automated approaches must contend with substantial data imbalance, site-specific variation, and evolving nomenclature. We investigated whether a large language model (LLM) can support reliable protocol selection at scale and whether retrieval-augmented generation (RAG) offers operational advantages over direct fine-tuning. Using 498,228 patient reports collected across three Mayo Clinic sites (Arizona, Florida, and Rochester) spanning six radiological divisions, we trained site-specific Llama 3.2 3B models for use with and without retrieval augmentation. Division-scoped Facebook AI Similarity Search (FAISS) indexes constructed from procedure and diagnosis text were used to supply contextual evidence in the RAG framework. Both fine-tuned and RAG-augmented models achieved strong performance across sites, with F1 scores of 0.88–0.90. RAG matched or modestly trailed direct fine-tuning overall but delivered consistent gains in specific divisions (e.g., musculoskeletal imaging). Importantly, the RAG model introduced abstention behavior (Not Enough Information), which concentrated in linguistically diverse divisions and provided an interpretable signal of uncertainty. These findings suggest that RAG-based models are viable for division-scoped protocol selection and offer practical advantages. Retrieval indexes can be refreshed far more easily and with fewer resources than retraining LLMs, enabling continual adaptation to evolving clinical workflows. Future prospective deployment will evaluate real-time accuracy, agreement with practitioners, and the role of abstention as a safety mechanism in clinical decision support.
Correlation of Automated Adaptive Thresholding for Inspiratory Mosaic and Expiratory Air Trapping on Chest CT With Pulmonary Function Tests
Helgeson, Scott A. , Demirer, Mutlu , Gupta, Vikash , Erdal, Barbaros S. , Sonavane, Sushilkumar K. , Helgeson, Scott A , Little, Brent P. , White, Richard D.

Journal of Computer Assisted Tomography | September 16, 2025 | Volume: 50 | Issue: 2 | Pages: 286-293

10.1097/rct.0000000000001798 Get It

Objective: Pulmonary air trapping is critical for diagnosing and prognostication of various lung diseases. Expiratory CT imaging serves as an accessible method to assess air trapping, which correlates with small airway disease outcomes. Air trapping manifests as mosaic attenuation on inspiratory chest CT that is difficult for visual estimation. The primary aim of this study was to develop an automated tool to quantify mosaic attenuation on inspiratory CT and air trapping on paired expiratory CT. Secondary aims included comparing CT-derived parameters with PFT measurements and dyspnea scores. Methods: This retrospective analysis of noncontrast chest CTs from 2 academic hospitals was conducted between January 1, 2018, and December 31, 2019. Patients with paired inspiratory and expiratory CT chest scans and PFTs performed on the same day were included. A chest radiologist manually annotated lung parenchyma in a reference cohort. Several histogram-based metrics were computed from lung parenchymal CT values, with the maximum peak position showing the strongest correlation with manually determined thresholds. This threshold, derived from the histogram peak, was applied in the adaptive thresholding process to quantify mosaic attenuation and air trapping. Results: We analyzed 267 patients (65.5% female, median age 68). Most exhibited normal physiological patterns (44.0%). Patients with elevated residual volume (RV) by PFTs (28.1%) had significantly higher inspiratory CT mosaic attenuation (1629.6 vs. 1311.5 mL, P <0.01) and expiratory CT air trapping volumes (1413.7 vs. 886.2 mL, P <0.01). Correlation analyses demonstrated strong relationships between CT-derived mosaic attenuation and air trapping measures and RV. The correlation with PFT parameters was even stronger in subgroup analyses in patients with obstructive PFT patterns. These models had good predictive ability for an abnormal RV (AUC of 0.92, sensitivity of 72.4%, and specificity of 92.0%) and clinical utility based on good correlation with the mMRC dyspnea score ( r =0.71; 95% CI: 0.65-0.77). Conclusions: This automated adaptive thresholding on inspiratory and expiratory chest CT scans showed a high correlation of lung volume and air trapping parameters with PFTs, revealing that measures of lung function have a complex interplay with air trapping.
Framingham Stroke Risk Profile Score and White Matter Disease Progression
Youssef, Hossam , Demirer, Mutlu , Middlebrooks, Erik H. , Anisetti, Bhrugun , Middlebrooks, Erik H , Youseff, Hossam , Meschia, James F. , Lin, Michelle

The Neurologist | June 13, 2024 | Volume: 29 | Issue: 5 | Pages: 259-264

10.1097/nrl.0000000000000567 Get It

Objectives: To evaluate the relationship between Framingham Stroke Risk Profile (FSRP) score and rate of white matter hyperintensity (WMH) progression and cognition. Methods: Consecutive patients enrolled in the Mayo Clinic Florida Familial Cerebrovascular Diseases Registry (2011-2020) with 2 brain-MRI scans at least 1 year apart were included. The primary outcome was annual change in WMH volume (cm3/year) stratified as fast versus slow (above vs. below median). Cognition was assessed using a Mini-Mental State Exam (MMSE, 0-30). FSRP score (0 to 8) was calculated by summing the presence of age 65 years or older, smoking, systolic blood pressure greater than 130 mmHg, diabetes, coronary disease, atrial fibrillation, left ventricular hypertrophy, and antihypertensive medication use. Linear and logistic regression analyses were performed to examine the association between FSRP and WMH progression, and cognition. Results: In all, 207 patients were included, with a mean age of 60±16 y and 54.6% female. FSRP scores risk distribution was: 31.9% scored 0 to 1, 36.7% scored 2 to 3, and 31.4% scored ≥4. The baseline WMH volume was 9.6 cm3 (IQR: 3.3-28.4 cm3), and the annual rate of WMH progression was 0.9 cm3/year (IQR: 0.1 to 3.1 cm3/year). A higher FSRP score was associated with fast WMH progression (odds ratio, 1.45; 95% CI: 1.22-1.72; P<0.001) and a lower MMSE score (23.6 vs. 27.1; P<0.001). There was a dose-dependent relationship between higher FSRP score and fast WMH progression (odds ratios, 2.20, 4.64, 7.86, 8.03 for FSRP scores 1, 2, 3, and ≥4, respectively; trend P<0.001). Conclusions: This study demonstrated an association between higher FSRP scores and accelerated WMH progression, as well as lower cognition.
Hemispheric Cortical Atrophy ipsilateral to Carotid Stenosis (N5.001)
Demirer, Mutlu , Anisetti, Bhrugun , Elkhair, Ahamed, Youssef, Hossam , Barrett, Kevin M. , Ertekin‐Taner, Nilüfer , Brott, Thomas G. , Youseff, Hossam , Lin, Michelle , Middlebrooks, Erik H. , Okromelidze, Lela , Meschia, James F.

Neurology | December 6, 2023 | Volume: 98 | Issue: 18_supplement | Pages: No page available

10.1212/wnl.98.18_supplement.3124 Get It

Breast-Density Semantic Segmentation with Probability Scaling for BI-RADS Assessment using DeepLabV3
Testagrose, Conrad , Gupta, Vikash , Erdal, Barbaros S. , White, Richard D. , Maxwell, Robert W. , Liu, Xudong , Kahanda, Indika , Elfayoumy, Sherif , Klostermeyer, William F. , Demirer, Mutlu , White, Richard D , Erdal, Barbaros S , Demirer, Mutlu , Gupta, Vikash

Proceedings of the 14th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics | October 4, 2023 | Volume: No volume available | Issue: No issue available | Pages: 1-6

10.1145/3584371.3612983 Get It

Abnormal Left Ventricular Geometry is Associated with Cerebral White Matter Disease (S36.005)
Salem, Amr , Mateti, Nihas, Demirer, Mutlu , Anisetti, Bhrugun , Youssef, Hossam , Elkhair, Ahamed, Youseff, Hossam , Adedinsewo, Demilade , Meschia, James F. , Lin, Michelle

Neurology | April 28, 2023 | Volume: 100 | Issue: 17_supplement_2 | Pages: No page available

10.1212/wnl.0000000000203017 Get It

Abstract WMP76: Carotid Revascularization Slows Hemispheric White Matter Disease Progression
Demirer, Mutlu , Craver, Emily C. , Middlebrooks, Erik H. , Anisetti, Bhrugun , Youssef, Hossam , Elkhair, Ahamed, Okromelidze, Leila, Barrett, Kevin M. , Ertekin‐Taner, Nilüfer , Brott, Thomas G. , Middlebrooks, Erik H , Youseff, Hossam , Lin, Michelle , Meschia, James F.

Stroke | February 2, 2023 | Volume: 54 | Issue: Suppl_1 | Pages: No page available

10.1161/str.54.suppl_1.wmp76 Get It

Introduction: Carotid revascularization is known to prevent stroke in patients with high-grade carotid stenosis, but whether carotid revascularization may slow the progression of hemispheric WMD in patients with carotid stenosis to prevent cognitive decline have not been well described. Methods: We conducted a longitudinal study involving patients age ≥40 years with carotid stenosis on ultrasound from 2011-2015 with serial brain MRI scans at least 1 year apart followed for radiographic and clinical outcomes to 2020. Severity of carotid stenosis was defined as moderate 50-69%, high-grade 70-99%, or occluded. Hemispheric WMD volume was quantified from axial T2 FLAIR images. Patients were stratified by revascularization status. Primary outcome was change in WMD volume per year ipsilateral or contralateral to the index carotid. Hemispheric differences in the annual rate of WMD progression (cc/yr) were compared between revascularized vs not revascularized using multivariable linear regression analysis adjusted for variables that differed between revascularization status. Results: Of the 150 patients, moderate stenosis was present in 37.3%, high-grade stenosis in 42.0%, and carotid occlusion in 20.7%. Mean age was 71±10 years, 36.7% were female. Seventy-three (48.7%) had carotid revascularization with a median follow-up of 5.1 years. Baseline WMD volume was 4.86cc ipsilateral and 4.39cc contralateral to the index carotid. Patients who underwent revascularization trended to have slower WMD progression in the hemisphere ipsilateral to the index carotid compared to those not revascularized (0.32cc/yr vs 0.63 cc/yr, p=0.340). The same trend was not observed in the contralateral hemisphere. In adjusted models, carotid revascularization was associated with a 0.33 cc per year decrease in WMD progression between hemispheres compared to those not revascularized (β= -0.33, p=0.070). Conclusions: In this study with a median follow-up of 5 years, we found that carotid revascularization resulted in a 50% reduction in the annual rate of WMD progression. Intervention trials should test whether carotid revascularization slows WMD progression in patients with cognitive impairment to prevent further cerebrovascular events and cognitive decline.
Impact of Concatenation of Digital Craniocaudal Mammography Images on a Deep-Learning Breast-Density Classifier Using Inception-V3 and ViT
Testagrose, Conrad , Gupta, Vikash , Erdal, Barbaros S. , Maxwell, Robert W. , Liu, Xudong , Kahanda, Indika , Elfayoumy, Sherif , Klostermeyer, William F. , Demirer, Mutlu , White, Richard

2022 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) | January 2, 2023 | Volume: No volume available | Issue: No issue available | Pages: 3399-3406

10.1109/bibm55620.2022.9995206 Get It

Pre-deployment assessment of an AI model to assist radiologists in chest X-ray detection and identification of lead-less implanted electronic devices for pre-MRI safety screening: realized implementation needs and proposed operational solutions
Demirer, Mutlu , Gupta, Vikash , Sebro, Ronnie , Kusumoto, Frederick M., Erdal, Barbaros S. , White, Richard D , Demirer, Mutlu , Gupta, Vikash , Sebro, Ronnie A, Erdal, Barbaros S , White, Richard

Journal of Medical Imaging | October 26, 2022 | Volume: 9 | Issue: 05 | Pages: No page available

10.1117/1.jmi.9.5.054504 Get It