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941 citation(s) found for "H, Shi".

Comparison of Oral Collection Methods for Studies of Microbiota
Vogtmann, Emily , Chen, Jun , Amir, Amnon , Shi, Jianxin , Chen, Yu , Eunes, Mahbubul, Ahmed, Alauddin , Naher, Jabun, Rahman, Anisur, Barmon, Bhaswati, Knight, Rob , Ahsan, Habibul , Abnet, Christian C. , Chia, Nicholas , Abnet, Christian C , Kibriya, Muhammad Ghulam , Islam, Tariqul , Chia, Nicholas , Sinha, Rashmi R. , Chen, Yu

Cancer Epidemiology, Biomarkers & Prevention | September 27, 2018 | Volume: 28 | Issue: 1 | Pages: 137-143

10.1158/1055-9965.epi-18-0312 | PMID 30262598 Get It

Abstract Background: A number of cohort studies have collected Scope mouthwash samples by mail, which are being used for microbiota measurements. We evaluated the stability of Scope mouthwash samples at ambient temperature and determined the comparability of Scope mouthwash with saliva collection using the OMNIgene ORAL Kit. Methods: Fifty-three healthy volunteers from Mayo Clinic and 50 cohort members from Bangladesh provided oral samples. One aliquot of the OMNIgene ORAL and Scope mouthwash were frozen immediately and one aliquot of the Scope mouthwash remained at ambient temperature for 4 days and was then frozen. DNA was extracted and the V4 region of the 16S rRNA gene was PCR amplified and sequenced using the HiSeq. Intraclass correlation coefficients (ICC) were calculated. Results: The overall stability of the Scope mouthwash samples was relatively high for alpha and beta diversity. For example, the meta-analyzed ICC for the Shannon index was 0.86 (95% confidence interval, 0.76–0.96). Similarly, the ICCs for the relative abundance of the top 25 genera were generally high. The comparability of the two sample types was relatively low when measured using ICCs, but were increased by using a Spearman correlation coefficient (SCC) to compare the rank order of individuals. Conclusions: Overall, the Scope mouthwash samples appear to be stable at ambient temperature, which suggests that oral rinse samples received by the mail can be used for microbial analyses. However, Scope mouthwash samples were distinct compared with OMNIgene ORAL samples. Impact: Studies should try to compare oral microbial metrics within one sample collection type.
Feasibility of Implementing the Patient-Reported Outcomes Version of the Common Terminology Criteria for Adverse Events in a Multicenter Trial: NCCTG N1048
Basch, Ethan , Dueck, Amylou C. , Rogak, Lauren J. , Minasian, Lori M. , Denicoff, Andrea , Wind, Jennifer, Shaw, Mary, Heon, Narre , Shi, Qian , Ginos, Brenda, Nelson, Garth D. , Meyers, Jeffrey P., Chang, George J. , Mamon, Harvey J. , Weiser, Martin R. , Kolevska, Tatjana , Bruner, Deborah Watkins , Denicoff, Andrea M, Wind, Jennifer K, Shaw, Mary C, Schrag, Deborah , Dueck, A. C. , Bruner, Deborah , Shi, Qian , Basch, Ethan , Mitchell, Sandra A , Shaw, Mary C., Reeve, Bryce B. , Schrag, Deborah

Journal of Clinical Oncology | September 11, 2018 | Volume: 36 | Issue: 31 | Pages: 3120-3125

10.1200/jco.2018.78.8620 | PMID 30204536 Get It

Purpose The US National Cancer Institute (NCI) Patient-Reported Outcomes version of the Common Terminology Criteria for Adverse Events (PRO-CTCAE) was developed to enable patient reporting of symptomatic adverse events in oncology clinical research. This study was designed to assess the feasibility and resource requirements associated with implementing PRO-CTCAE in a multicenter trial. Methods Patients with locally advanced rectal cancer enrolled in the National Cancer Institute–sponsored North Central Cancer Treatment Group (Alliance) Preoperative Radiation or Selective Preoperative Radiation and Evaluation before Chemotherapy and Total Mesorectal Excision trial were asked to self-report 30 PRO-CTCAE items weekly from home during preoperative therapy, and every 6 months after surgery, via either the Web or an automated telephone system. If participants did not self-report within 3 days, a central coordinator called them to complete the items. Compliance was defined as the proportion of participants who completed PRO-CTCAE assessments at expected time points. Results The prespecified PRO-CTCAE analysis was conducted after the 500th patient completed the 6-month follow-up (median age, 56 years; 33% female; 12% nonwhite; 43% high school education or less; 5% Spanish speaking), across 165 sites. PRO-CTCAE was reported by participants at 4,491 of 4,882 expected preoperative time points (92.0% compliance), of which 3,771 (77.2%) were self-reported by participants and 720 (14.7%) were collected via central coordinator backup. Compliance at 6-month post-treatment follow-up was 333 of 468 (71.2%), with 122 (26.1%) via backup. Site research associates spent a median of 15 minutes on PRO-CTCAE work for each patient visit. Work by a central coordinator required a 50% time commitment. Conclusion Home-based reporting of PRO-CTCAE in a multicenter trial is feasible, with high patient compliance and low site administrative requirements. PRO-CTCAE data capture is improved through centralized backup calls.
PILLAR-2: A randomized, double-blind, placebo-controlled, phase III study of adjuvant everolimus (EVE) in patients (pts) with poor-risk diffuse large B-cell lymphoma (DLBCL).
Tobinai, Kensei , Lin, Tongyu , Vanazzi, Anna , Hino, Masayuki , Shi, Yuankai , Mayer, Jiřı́ , Bermúdez, Carlos , Zhu, Jun , Bouabdallah, Kamal , Kattan, Joseph , Wu, Cassandra, Fan, Jenna, Louveau, Anne-Laure, Voi, Maurizio, Cavalli, Franco , Witzig, Thomas E. , Rigacci, Luigi , Ikeda, Takashi , Costa, Luciano J. , Belada, David

Journal of Clinical Oncology | September 6, 2018 | Volume: 34 | Issue: 15_suppl | Pages: 7506-7506

10.1200/jco.2016.34.15_suppl.7506 Get It

Deletions in HSP110 T17 and patient prognosis in stage III microsatellite instable (MSI) colon cancers: Findings from CALGB 89803 and NCCTG N0147.
Tomšič, Jerneja , Meyers, Jeffrey P., Timmers, Cynthia , Niedzwiecki, Donna , Chapelle, Albert de la , Goldberg, Richard M. , Niedzwiecki, Donna , Wu, Christina , Shi, Qian , Frankel, Wendy L. , Saltz, Leonard B. , Alberts, Steven R. , Sargent, Daniel J. , Hampel, Heather

Journal of Clinical Oncology | September 6, 2018 | Volume: 34 | Issue: 15_suppl | Pages: e15148-e15148

10.1200/jco.2016.34.15_suppl.e15148 Get It

Association of tumor infiltrating lymphocytes (TILs) with molecular subtype and prognosis in stage III colon cancers (CC) from a FOLFOX-based adjuvant chemotherapy trial.
Smyrk, Thomas C. , Foster, Nathan R. , Meyers, Jeffrey P., Thibodeau, Stephen N. , Goldberg, Richard M. , Sinicrope, Frank A. , Shi, Qian , Sargent, Daniel J. , Alberts, Steven R.

Journal of Clinical Oncology | September 6, 2018 | Volume: 34 | Issue: 15_suppl | Pages: 3518-3518

10.1200/jco.2016.34.15_suppl.3518 Get It

Molecular markers and survival after recurrence in stage III colon cancers from NCCTG N0147 and NSABP C-08 adjuvant chemotherapy trials.
Allegra, Carmen J. , Smyrk, Thomas C. , Thibodeau, Stephen N. , Goldberg, Richard M. , Meyers, Jeffrey P., Sinicrope, Frank A. , Shi, Qian , Yothers, Greg , Sargent, Daniel J. , Alberts, Steven R.

Journal of Clinical Oncology | September 6, 2018 | Volume: 34 | Issue: 15_suppl | Pages: 3600-3600

10.1200/jco.2016.34.15_suppl.3600 Get It

Overall survival in patients with glioblastoma before and after bevacizumab approval.
Ravelo, Arliene , Sommer, Nicolas, Guérin, Annie , Ionescu‐Ittu, Raluca , Macalalad, Alexander R. , Shi, Sherry, Uhm, Joon H. , Johnson, Derek R. , Omuro, Antonio

Journal of Clinical Oncology | September 6, 2018 | Volume: 34 | Issue: 15_suppl | Pages: 2062-2062

10.1200/jco.2016.34.15_suppl.2062 Get It

Infusional gemcitabine + docetaxel/melphalan/carboplatin (GemDMC) ± bevacizumab (BEV) as an effective high-dose chemotherapy (HDC) regimen for refractory of poor-risk relapsed germ-cell tumors (GCT).
Tu, Shi‐Ming, Bassett, Roland, Hofstetter, Wayne L. , Jones, Roy B. , Ledesma, Celina, Timmons, Melissa, Trapp, Michelle, Pagliaro, Lance C. , Nieto, Yago , Tu, Shi‐Ming , Campbell, Matthew T. , Tannir, Nizar , Ward, John F. , Andersson, Börje S. , Gulbis, Alison M. , Champlin, Richard E.

Journal of Clinical Oncology | September 6, 2018 | Volume: 35 | Issue: 15_suppl | Pages: 4519-4519

10.1200/jco.2017.35.15_suppl.4519 Get It

4519 Background: Tandem HDC with carbo/etoposide (CE) is curative for a portion of relapsed GCT pts. However, outcomes of refractory or high-risk relapsed pts remain poor. We tested a new HDC regimen of GemDMC, based on DNA damage repair inhibition. We combined BEV with HDC given their potential synergy and the high vascularity of GCT metastases. Methods: Eligibility: Intermediate (int)/high-risk (Beyer Model), creatinine ≤1.8 mg/dL and adequate organ function. HDC included BEV (5 mg/kg) preceding GemDMC (HDC #1) and ifosfamide/CE (ICE) (HDC #2). Following accrual of 42 pts, we amended the trial omitting BEV. The trial was powered to distinguish a target 50% 2-yr RFS from an expected 25% in this population. Results: We enrolled 69 male pts in cohorts 1 (BEV, N=42) and 2 (no BEV, N=27) (Table). Pts were heavily pretreated and most had refractory tumors. Main AE: mucositis and renal (4 HDC-related deaths in cohort 1, 1 in cohort 2). Tumor markers normalized in 90% pts with active tumors at HDC. After HDC, 19 pts were in CR and 28 in PRm- (of these, 22 had residual lesions resected with no viable tumor found in 20/22, 2 xRT, 4 monitored). Median f/u = 39 (2-105) mo. The 2-yr RFS rates in cohorts 1 and 2 = 52% and 78%, respectively. Their respective 2-yr OS rates = 55% and 81%. Conclusions: Sequential HDC with GemDMC–ICE shows encouraging outcomes in heavily pretreated and refractory GCT, exceeding the anticipated results. Addition of BEV increases toxicity but not tumor control. Clinical trial information: NCT00936936. [Table: see text]
Impact of early FDG-PET directed intervention on preoperative therapy for locally advanced gastric cancer: A Cooperative Group random assignment phase II study (Alliance A021302) Impac.
Strong, Vivian E. , Strasser, Jon, Ilson, David H. , Kleinberg, Lawrence , Iqbal, Syma , Wuthrick, Evan , Levasseur, Alexandra, Shah, Manish A , Shi, Qian , Strasser, Jon, Hall, Nathan C. , Meyerhardt, Jeffrey A. , O’Reilly, Eileen M.

Journal of Clinical Oncology | September 6, 2018 | Volume: 35 | Issue: 15_suppl | Pages: TPS4135-TPS4135

10.1200/jco.2017.35.15_suppl.tps4135 Get It

TPS4135 Background: Gastric cancer is a prevalent and morbid illness for which new treatment strategies are needed. Peri-operative therapy is a standard approach that is associated with only a 15% improvement in overall survival. Early FDG-PET scanning, performed prior to cycle 2, can distinguish patients (pts) responding to chemotherapy from those who are not. FDG-PET non-responding pts have poorer survival. This study addresses the question of salvage therapy in pts who are PET non-responders. Specifically, does salvage chemotherapy with docetaxel /irinotecan improve pt survival in FDG-PET-nonresponding pts with locally advanced gastric cancer. Methods: This is a multicenter, cooperative group, NCI supported, randomized phase II study of salvage chemotherapy + surgery versus surgery and post-operative chemoradiotherapy in pts who are FDG-PET non-responders (defined as a decrease in SUVmaxof the primary tumor of less than 35%). A total of 176 pts with locally advanced, resectable gastric cancer who were FDG-PET non-responders to cycle 1 of platinum/capecitabine based chemotherapy will be randomized in a 1:1 manner to receive either (Arm A) surgery followed by fluoropyrimidine-sensitized radiotherapy (4500 cGy), or (Arm B) salvage chemotherapy with docetaxel / irinotecan (DI) for 2 cycles followed by standard resection and 3 cycles DI post-operatively. DI is administered as D 30 mg/m2, I 50 mg/m2 given on D1, D8 of a 21 day cycle. 416 pts will be screened to yield 162 non-responders (81 FDG-PET non-responders per treatment group). With expected 120 events, the study will have 80% power to detect a hazard ratio of 0.625 for improved survival at the one-sided significant level of 0.15. Pts will be required to provide tissue at the time of resection, as well as whole blood prior to resection for correlative studies associated with platinum sensitivity, FDG avidity, and prognostic markers. This study is available through all cooperative groups (SWOG, ACRIN/ECOG, Alliance, and NRG) and the National Clinical Trials Network. Enrollment began in November 2015. Support: U10CA180821, U10CA180882; Clinical Trial Information: NCT02485834 .
Alliance for clinical trials in oncology trial A021501: Preoperative extended chemotherapy vs. chemotherapy plus hypofractionated radiation therapy for borderline resectable adenocarcinoma of the head of the pancreas.
Wolpin, Brian M. , Marsh, Robert , Chuong, Michael D. , Katz, Matthew H. G. , Ou, Fang‐Shu , Herman, Joseph M. , Ahmad, Syed Ameen , Shi, Qian , Hubbard, Joleen M. , Meyerhardt, Jeffrey A. , O’Reilly, Eileen M.

Journal of Clinical Oncology | September 6, 2018 | Volume: 35 | Issue: 15_suppl | Pages: TPS4151-TPS4151

10.1200/jco.2017.35.15_suppl.tps4151 Get It

TPS4151 Background: Borderline resectable pancreatic cancers infiltrate into adjacent vascular structures to an extent that makes an R0 resection unlikely when pancreatectomy is performed de novo. In a pilot study, Alliance for Clinical Trials in Oncology Trial A021101, the median survival of patients who received chemotherapy and radiation prior to anticipated pancreatectomy was 22 months, and an R0 resection was achieved in 64% of operations. However, the individual contributions of preoperative chemotherapy and radiation therapy are poorly defined.This study, Alliance for Clinical Oncology Trial A021501, will help define a standard preoperative treatment regimen for borderline resectable pancreatic cancer and position the superior arm for further evaluation in future phase III trials. Methods: In this recently activated randomized phase II trial, 134 patients with a biopsy-confirmed pancreatic ductal adenocarcinoma that meets centrally-reviewed radiographic criteria for borderline resectable disease are randomized to receive either 8 cycles of modified FOLFIRINOX (oxaliplatin 85 mg/m2, irinotecan 180 mg/m2, leucovorin 400 mg/m2 and infusional 5-fluorouracil 2400 mg/m2 for 4 cycles) or to 7 cycles of modified FOLFIRINOX followed by stereotactic body radiation therapy (33-40 Gy in 5 fractions). Patients without evidence of disease progression following preoperative therapy undergo pancreatectomy and subsequently receive 4 cycles of postoperative modified FOLFOX6 (oxaliplatin 85 mg/m2, leucovorin 400 mg/m2 and infusional 5-fluorouracil 2400 mg/m2 for 4 cycles). The primary endpoint is the 18-month overall survival rate of patients enrolled into each of the two treatment arms. An interim analysis of the R0 resection rate within each arm will be conducted to assess treatment futility after accrual of 30 patients. Secondary endpoints include rates of margin-negative resection and event-free survival. The trial is activated nationwide and eligible to be opened for accrual at any National Clinical Trials Network cooperative group member site. Clinical trial information: NCT02839343.