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758 citation(s) found for "Lake, DF".

Exploratory study of a KLK2 polymorphism as a prognostic marker in prostate cancer
Kohli, Manish , Rothberg, Paul G., Feng, Changyong , Messing, Edward M. , Joseph, Jean, Rao, Sreevidya Sadasiva, Hendershot, Allison , Sahsrabudhe, Deepak, Kohli, Manish

Cancer Biomarkers | January 31, 2017 | Volume: 7 | Issue: 2 | Pages: 101-108

10.3233/cbm-2010-0152 | PMID 21178268 Get It

A Dynamic Transmission Model to Evaluate the Effectiveness of Infection Control Strategies
Khader, Karim , Leecaster, Molly, Samore, Matthew H. , Thomas, Alun , Huskins, W. Charles , Zhang, Yue , Greene, Tom , Redd, Andrew Middleton

Open Forum Infectious Diseases | December 9, 2016 | Volume: 4 | Issue: 1 | Pages: No page available

10.1093/ofid/ofw247 | PMID 28702465 Get It

Abstract Background The advancement of knowledge about control of antibiotic resistance depends on the rigorous evaluation of alternative intervention strategies. The STAR*ICU trial examined the effects of active surveillance and expanded barrier precautions on acquisition of methicillin-resistant Staphylococcus aureus (MRSA) and vancomycin-resistant Enterococcus (VRE) in intensive care units. We report a reanalyses of the STAR*ICU trial using a Bayesian transmission modeling framework. Methods The data included admission and discharge times and surveillance test times and results. Markov chain Monte Carlo stochastic integration was used to estimate the transmission rate, importation, false negativity, and clearance separately for MRSA and VRE. The primary outcome was the intervention effect, which when less than (or greater than) zero, indicated a decreased (or increased) transmission rate attributable to the intervention. Results The transmission rate increased in both arms from pre- to postintervention (by 20% and 26% for MRSA and VRE). The estimated intervention effect was 0.00 (95% confidence interval [CI], −0.57 to 0.56) for MRSA and 0.05 (95% CI, −0.39 to 0.48) for VRE. Compared with MRSA, VRE had a higher transmission rate (preintervention, 0.0069 vs 0.0039; postintervention, 0.0087 vs 0.0046), higher importation probability (0.22 vs 0.17), and a lower clearance rate per colonized patient-day (0.016 vs 0.035). Conclusions Transmission rates in the 2 treatment arms were statistically indistinguishable from the pre- to postintervention phase, consistent with the original analysis of the STAR*ICU trial. Our statistical framework was able to disentangle transmission from importation and account for imperfect testing. Epidemiological differences between VRE and MRSA were revealed.
Longitudinal changes in menopausal symptoms comparing women randomized to low-dose oral conjugated estrogens or transdermal estradiol plus micronized progesterone versus placebo: the Kronos Early Estrogen Prevention Study
Neal‐Perry, Genevieve , Pal, Lubna , Løbo, Rogerio A. , Black, Dennis M. , Budoff, Matthew J. , Cedars, Marcelle I. , Dowling, N. Maritza , Dunn, Mary Hunzicker, Gleason, Carey E. , Hodis, Howard N., Isaac, Barbara, Magnani, Maureen, Miller, Virginia M. , Taylor, Hugh S. , Wharton, Whitney , Wolff, E.F., Zepeda, Viola, Harman, S. Mitchell , Santoro, Nanette, Santoro, Nanette F. , Allshouse, Amanda A. , Naftolin, Frederick , Brinton, Eliot A. , Manson, JoAnn E. , Budoff, Matthew

Menopause | October 25, 2016 | Volume: 24 | Issue: 3 | Pages: 238-246

10.1097/gme.0000000000000756 | PMID 27779568 Get It

Abstract Objective: The objective of the present study was to compare the efficacy of two forms of menopausal hormone therapy in alleviating vasomotor symptoms, insomnia, and irritability in early postmenopausal women during 4 years. Methods: A total of 727 women, aged 42 to 58, within 3 years of their final menstrual period, were randomized to receive oral conjugated estrogens (o-CEE) 0.45 mg (n = 230) or transdermal estradiol (t-E 2 ) 50 μg (n = 225; both with micronized progesterone 200 mg for 12 d each mo), or placebos (PBOs; n = 275). Menopausal symptoms were recorded at screening and at 6, 12, 24, 36, and 48 months postrandomization. Differences in proportions of women with symptoms at baseline and at each follow-up time point were compared by treatment arm using exact χ 2 tests in an intent-to-treat analysis. Differences in treatment effect by race/ethnicity and body mass index were tested using generalized linear mixed effects modeling. Results: Moderate to severe hot flashes (from 44% at baseline to 28.3% for PBO, 7.4% for t-E 2 , and 4.2% for o-CEE) and night sweats (from 35% at baseline to 19% for PBO, 5.3% for t-E 2 , and 4.7% for o-CEE) were reduced significantly by 6 months in women randomized to either active hormone compared with PBO ( P < 0.001 for both symptoms), with no significant differences between the active treatment arms. Insomnia and irritability decreased from baseline to 6 months postrandomization in all groups. There was an intermittent reduction in insomnia in both active treatment arms versus PBO, with o-CEE being more effective than PBO at 36 and 48 months ( P = 0.002 and 0.05) and t-E 2 being more effective than PBO at 48 months ( P = 0.004). Neither hormone treatment significantly affected irritability compared with PBO. Symptom relief for active treatment versus PBO was not significantly modified by body mass index or race/ethnicity. Conclusions: Recently postmenopausal women had similar and substantial reductions in hot flashes and night sweats with lower-than-conventional doses of oral or transdermal estrogen. These reductions were sustained during 4 years. Insomnia was intermittently reduced compared with PBO for both hormone regimens.
Total and Lectin-Binding Proteome of Spherulin from Coccidioides posadasii
Grys, Thomas E. , Kaushal, Setu, Chowdhury, Yasmynn, Dasari, Surendra , Mitchell, Natalie M., Magee, D. Mitchell, Blair, Janis E. , Colby, Thomas V. , Lake, Douglas F. , Mitchell, Natalie Michelle, Grys, Thomas E

Journal of Proteome Research | August 22, 2016 | Volume: 15 | Issue: 10 | Pages: 3463-3472

10.1021/acs.jproteome.5b01054 | PMID 27546806 Get It

Context-sensitive decision support (infobuttons) in electronic health records: a systematic review
Cook, David A. , Teixeira, Miguel T. , Heale, Bret S.E. , Fiol, Guilherme Del , Cimino, James J. , Del Fiol, Guilherme

Journal of the American Medical Informatics Association | August 7, 2016 | Volume: 24 | Issue: 2 | Pages: 460-468

10.1093/jamia/ocw104 | PMID 27497794 Get It

Objective: Infobuttons appear as small icons adjacent to electronic health record (EHR) data (e.g., medications, diagnoses, or test results) that, when clicked, access online knowledge resources tailored to the patient, care setting, or task. Infobuttons are required for “Meaningful Use” certification of US EHRs. We sought to evaluate infobuttons’ impact on clinical practice and identify features associated with improved outcomes. Methods: We conducted a systematic review, searching MEDLINE, EMBASE, and other databases from inception to July 6, 2015. We included and cataloged all original research in any language describing implementation of infobuttons or other context-sensitive links. Studies evaluating clinical implementations with outcomes of usage or impact were reviewed in greater detail. Reviewers worked in duplicate to select articles, evaluate quality, and abstract information. Results: Of 599 potential articles, 77 described infobutton implementation. The 17 studies meriting detailed review, including 3 randomized trials, yielded the following findings. Infobutton usage frequency ranged from 0.3 to 7.4 uses per month per potential user. Usage appeared to be influenced by EHR task. Five studies found that infobuttons are used less often than non–context-sensitive links (proportionate usage 0.20–0.34). In 3 studies, users answered their clinical question in &gt; 69% of infobutton sessions. Seven studies evaluated alternative approaches to infobutton design and implementation. No studies isolated the impact of infobuttons on objectively measured patient outcomes. Conclusions: Weak evidence suggests that infobuttons can help providers answer clinical questions. Research on optimal infobutton design and implementation, and on the impact on patient outcomes and provider behaviors, is needed.
National Comprehensive Cancer Network Recommendations on Molecular Profiling of Advanced Bladder Cancer
Pal, Sumanta K. , Agarwal, Neeraj , Boorjian, Stephen A. , Hahn, Noah M. , Siefker‐Radtke, Arlene O. , Pal, Sumanta Kumar, Boorjian, Stephen Anthony, Clark, Peter E, Plimack, Elizabeth R, Agarwal, Neeraj , Siefker-Radtke, Arlene Odelia , Clark, Peter E. , Plimack, Elizabeth R.

Journal of Clinical Oncology | July 26, 2016 | Volume: 34 | Issue: 27 | Pages: 3346-3348

10.1200/jco.2016.68.1429 | PMID 27458279 Get It

Management of Chronic Pain in Survivors of Adult Cancers: American Society of Clinical Oncology Clinical Practice Guideline
Portenoy, Russell K. , Lacchetti, Christina , Citron, Marc L., Cooper, A., Glare, Paul , Keefe, Frank, Koyyalagunta, Lakshmi, Otis‐Green, Shirley , Sloan, Paul A., Paice, Judith A, Portenoy, Russell, Campbell, Toby, Citron, Marc, Constine, Louis S, Cooper, Andrea, Miaskowski, Christine, Otis-Green, Shirley, Sloan, Paul, Bruera, Eduardo, Paice, Judith A. , Campbell, Toby C. , Cheville, Andrea , Constine, Louis S , Levy, Michael , Miaskowski, Christine , Bruera, Eduardo

Journal of Clinical Oncology | July 25, 2016 | Volume: 34 | Issue: 27 | Pages: 3325-3345

10.1200/jco.2016.68.5206 | PMID 27458286 Get It

Purpose To provide evidence-based guidance on the optimum management of chronic pain in adult cancer survivors. Methods An ASCO-convened expert panel conducted a systematic literature search of studies investigating chronic pain management in cancer survivors. Outcomes of interest included symptom relief, pain intensity, quality of life, functional outcomes, adverse events, misuse or diversion, and risk assessment or mitigation. Results A total of 63 studies met eligibility criteria and compose the evidentiary basis for the recommendations. Studies tended to be heterogeneous in terms of quality, size, and populations. Primary outcomes also varied across the studies, and in most cases, were not directly comparable because of different outcomes, measurements, and instruments used at different time points. Because of a paucity of high-quality evidence, many recommendations are based on expert consensus. Recommendations Clinicians should screen for pain at each encounter. Recurrent disease, second malignancy, or late-onset treatment effects in any patient who reports new-onset pain should be evaluated, treated, and monitored. Clinicians should determine the need for other health professionals to provide comprehensive pain management care in patients with complex needs. Systemic nonopioid analgesics and adjuvant analgesics may be prescribed to relieve chronic pain and/or to improve function. Clinicians may prescribe a trial of opioids in carefully selected patients with cancer who do not respond to more conservative management and who continue to experience distress or functional impairment. Risks of adverse effects of opioids should be assessed. Clinicians should clearly understand terminology such as tolerance, dependence, abuse, and addiction as it relates to the use of opioids and should incorporate universal precautions to minimize abuse, addiction, and adverse consequences. Additional information is available at www.asco.org/chronic-pain-guideline and www.asco.org/guidelineswiki .
Germline genetic variation in JAK2 as a prognostic marker in castration‐resistant prostate cancer
Zhang, Ben Y., Riska, Shaun M., Costello, Brian A. , Kohli, Rhea, Quevedo, J. Fernando , Kohli, Manish , Mahoney, Douglas W. , Quevedo, Jorge F, Cerhan, James R. , Kohli, Manish

BJU International | July 13, 2016 | Volume: 119 | Issue: 3 | Pages: 489-495

10.1111/bju.13584 | PMID 27410686 Get It

Objectives To evaluate the prognostic significance of germline variation in candidate genes in patients with castration‐resistant prostate cancer (CRPC). Methods Germline DNA was extracted from peripheral blood mononuclear cells of patients with CRPC enrolled in a clinically annotated registry. Fourteen candidate genes implicated in either initiation or progression of prostate cancer were tagged using single nucleotide polymorphisms (SNPs) from HapMap with a minor allele frequency of >5%. The primary endpoint was overall survival (OS), defined as time from development of CRPC to death. Principal component analysis was used for gene levels tests of significance. For SNP‐level results the per allele hazard ratios (HRs) and 95% confidence intervals (CIs) under the additive allele model were estimated using Cox regression, adjusted for age at CRPC and Gleason score (GS). Results A total of 240 patients with CRPC were genotyped (14 genes; 84 SNPs). The median (range) age of the cohort was 69 (43–93) years. The GS distribution was 55% with GS ≥8, 32% with GS = 7 and 13% with GS <7 or unknown. The median (interquartile range) time from castration resistance to death for the cohort was 2.67 (1.6–4.07) years (144 deaths). At the gene level, a single gene, JAK2 was associated with OS ( P < 0.01), and 11 of 18 JAK2 SNPs were individually associated with OS after adjustment for age and GS. A multivariate model consisting of age, GS, rs2149556 (HR 0.67; 95% CI 0.38–1.18) and rs4372063 (HR 2.17; 95% CI 1.25–3.76) was constructed to predict survival in patients with CRPC (concordance of 0.69, P < 3.2 × 10 −9 ). Conclusions Germline variation in the JAK2 gene was associated with survival in patients with CRPC and warrants further validation as a potential prognostic biomarker.
Common Genetic Variation in CYP17A1 and Response to Abiraterone Acetate in Patients with Metastatic Castration-Resistant Prostate Cancer
Binder, Moritz , Zhang, Ben , Kohli, Rhea, Kohli, Tanvi, Kohli, Manish , Zhang, Ben Y., Hillman, David W. , Lee, Adam , Binder, Moritz , Kohli, Manish

International Journal of Molecular Sciences | July 11, 2016 | Volume: 17 | Issue: 7 | Pages: 1097

10.3390/ijms17071097 | PMID 27409606 Get It

Treatment with abiraterone acetate and prednisone (AA/P) prolongs survival in metastatic castration-resistant prostate cancer (mCRPC) patients. We evaluated the genetic variation in CYP17A1 as predictive of response to AA/P. A prospective collection of germline DNA prior to AA/P initiation and follow-up of a mCRPC cohort was performed. Five common single-nucleotide polymorphisms (SNPs) in CYP17A1 identified using a haplotype-based tagging algorithm were genotyped. Clinical outcomes included biochemical response and time to biochemical progression on AA/P. Logistic regression was used to assess the association between tag SNPs and biochemical response. Proportional hazards regression was used to assess the association between tag SNPs and time to biochemical progression. Odds or hazard ratio per minor allele were estimated and p-values below 0.05 were considered statistically significant. Germline DNA was successfully genotyped for four tag SNPs in 87 patients. The median age was 73 years (54–90); the median prostate-specific antigen was 66 ng/dL (0.1–99.9). A single SNP, rs2486758, was associated with lower odds of experiencing a biochemical response (Odds ratio 0.22, 95% confidence interval 0.07–0.63, p = 0.005) and a shorter time to biochemical progression (Hazard ratio 2.23, 95% confidence interval 1.39–3.56, p < 0.001). This tag SNP located in the promoter region of CYP17A1 will need further validation as a predictive biomarker for AA/P therapy.
Implantable Cardioverter Defibrillator Programming Characteristics, Shocked Rhythms, and Survival Among Patients Under Thirty Years of Age
Chang, Philip M. , Powell, Brian D. , Jones, Paul W. , Carter, Nathan , Hayes, David L. , Saxon, Leslie A.

Journal of Cardiovascular Electrophysiology | June 23, 2016 | Volume: 27 | Issue: 10 | Pages: 1183-1190

10.1111/jce.13038 | PMID 27334356 Get It

ICD Characteristics and Survival in Young PatientsIntroductionIndications for implantable cardioverter defibrillators (ICDs) in young patients have expanded and differ from those in older adults. We sought to provide descriptive characteristics and data regarding ICD therapy and outcomes among younger and older ICD recipients.Methods and ResultsDemographics, device type and programming, remotely transmitted data, shock events, and survival were compared among younger (≤30 years) and older (>30 years) cohorts with ICDs from a single manufacturer followed on a remote network. The younger cohort included 904 patients (1.6% of all implants). This group had more females (46% vs. 25%; P < 0.01), single‐coil leads (21% vs. 4%; P < 0.01), and single‐chamber devices (46% vs. 34%; P < 0.01). Shock incidence was higher (40% younger vs. 32% older at 4 years; P < 0.01) and survival was better over comparable follow‐up (88% vs. 72%; P < 0.01). Remote monitoring was associated with improved survival in both groups (93% vs. 86% ≤ 30 years, P < 0.01; 73% vs. 66% > 30 years, P < 0.01). Shock for polymorphic ventricular tachycardia/fibrillation (VT/VF) was more frequent in younger patients (12% vs. 5%; P < 0.01); 39% of all shocks were inappropriate. A 10‐fold increased risk of mortality was seen among young patients with shocks for atrial fibrillation/flutter (AF/AFL).ConclusionsDifferences in survival, shock incidence, and prognostic significance of VT/VF and AF/AFL exist between younger and older ICD recipients. These suggest distinct differences in myocardial substrates and diseases that ultimately impact ICD management.