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539 citation(s) found for "Ma, Feng".

Low penetrance breast cancer susceptibility loci are associated with specific breast tumor subtypes: findings from the Breast Cancer Association Consortium
Schmidt, Marjanka K. , Sherman, Mark E., Hopper, John L. , Dite, Gillian S. , Apicella, Carmel, Smith, Letitia, Hammet, Fleur, Southey, Melissa C. , Veer, Laura van ‘t , Smit, Vincent T.H.B.M. , Fasching, Peter A. , Beckmann, Matthias W. , Jud, Sebastian M. , Ekici, Arif B. , Hartmann, Arndt , Hein, Alexander , Schulz-Wendtland, R., Burwinkel, Barbara , Schneeweiß, Andreas , Sinn, Hans‐Peter , Sohn, Christof , Tchatchou, Sandrine, Bojesen, Stig E. , Nordestgaard, Børge G. , Flyger, Henrik, Ørsted, David D., Kaur‐Knudsen, Diljit, Rodríguez, Primitiva Menéndez, Brauch, Hiltrud , Justenhoven, Christina , Ko, Yon‐Dschun, Network, The Genica, Hamann, Ute, Fischer, Hans‐Peter , Brüning, Thomas , Pesch, Beate, Chang‐Claude, Jenny , Wang‐Gohrke, Shan , Bremer, Michael , Karstens, Johann H., Hillemanns, Peter , Dörk, Thilo , Nevanlinna, Heli , Heikkinen, Tuomas , Blomqvist, Carl , Aittomäki, Kristiina, Aaltonen, Kirsimari, Lindblom, Annika , Margolin, Sara , Mannermaa, Arto, Kosma, Veli‐Matti , Kauppinen, Jaana M., Kataja, Vesa , Auvinen, Päivi , Eskelinen, Matti , Soini, Ylermi, Chenevix‐Trench, Georgia , Spurdle, Amanda B. , Beesley, Jonathan, Chen, Xiaoqing, Holland, Helene, kConFab, AOCS, Lambrechts, Diether , Claes, Bart, Vandorpe, T., Neven, Patrick , Wildiers, Hans , Flesch‐Janys, Dieter, Hein, Rebecca, Löning, Thomas , Kosel, Matthew , Fredericksen, Zachary S., Giles, Graham G. , Baglietto, Laura , Severi, Gianluca , McLean, Catriona , Haiman, Christopher A., Henderson, Brian E., Kolonel, Laurence N. , Alnæs, Grethe Grenaker, Kristensen, Vessela, Børresen‐Dale, Anne‐Lise , Hunter, David J. , Hankinson, Susan E. , Andrulis, Irene L. , Mulligan, Anna Marie , O’Malley, Frances P., Huijts, Petra E.A., Tollenaar, Rob A.�E.�M. , Seynaeve, Caroline, Lissowska, Jolanta , Brinton, Louise A. , Pepłońska, Beata , Yang, Xiaohong R. , Hooning, Maartje J. , Hollestelle, Antoinette , Oldenburg, Rogier A., Jager, Agnes , Kriege, Mieke, Ozturk, Bahar, Czene, Kamila , Humphreys, Keith , Liu, Jianjun , Cox, Angela , Connley, Daniel, Cramp, Helen, Balasubramanian, Sabapathy P. , Reed, Malcolm , Dunning, Alison M. , Easton, Douglas F., Humphreys, Manjeet K., Caldas, Carlos , Blows, Fiona M., Driver, Kristy, Provenzano, Elena , Lubiński, Jan , Jakubowska, Anna , Huzarski, Tomasz , Byrski, Tomasz , Górski, Bohdan , Brennan, Paul , Sangrajrang, Suleeporn , Gaborieau, Valérie , Shen, Chen‐Yang , Hsiung, Chia‐Ni , Yu, Jyh‐Cherng , Chen, Shou‐Tung , Hsu, Giu‐Cheng, Hou, Ming‐Feng , Huang, Chiun‐Sheng , García‐Closas, Montserrat , Thorne, Heather , Hartikainen, Jaana M. , Bowtell, David D.L. , Lambrechts, Diether , Broeks, Annegien , Couch, Fergus J. , Veer, Laura J. van’t , Groot, Renate H. M. de , Marmé, Frederik , Milne, Roger L. , Pérez, José Ignacio Arias , Zamora, Pilar M. , Benı́tez, Javier , Network, The Genica, Heikkilä, Päivi , Mannermaa, Arto, Chen, Xiaoqing, kConFab, AOCS, Wang, Xianshu , Marchand, Loı̈c Le , Kristensen, Vessela N. , Devilee, Peter , Asperen, Christi J. van , Chanock, Stephen Jacob , Figueroa, Jonine D. , Leenders, Geert J.L.H. van , Hall, Per N , Cross, Simon S. , Cybulski, Cezary , Gronwald, Jacek , Anton‐Culver, Hoda , Ziogas, Argyrios , Pharoah, Paul D.P. , Nevanlinna, H , Dörk, Thilo , Lambrechts, Diether , Giles, Graham G , Spurdle, Amanda B , Hein, Alexander , Hillemanns, Peter , Lissowska, Jolanta , Caldas, Carlos , Southey, Melissa C , Sinn, Peter , Dunning, Alison M , Jakubowska, Anna , Lambrechts, Diether , Cox, Angela , García-Closas, Montserrat , Schmidt, Marjanka K , Severi, Gianluca , Ekici, Arif B , Hartikainen, Jaana M , Chenevix-Trench, Georgia , Huzarski, Tomasz , Czene, Kamila , Bowtell, David D , Lubinski, Jan , Baglietto, Laura , Bojesen, Stig E , Huang, Chiun-Sheng , Wildiers, Hans , Mclean, Catriona , Brauch, Hiltrud , Lindblom, Annika , Liu, Jing

Human Molecular Genetics | May 19, 2011 | Volume: 20 | Issue: 16 | Pages: 3289-3303

10.1093/hmg/ddr228 | PMID 21596841 Get It

The Selaginella Genome Identifies Genetic Changes Associated with the Evolution of Vascular Plants
Banks, Jo Ann , Nishiyama, Tomoaki , Hasebe, Mitsuyasu , Bowman, John L. , Gribskov, Michael , dePamphilis, Claude W. , Albert, Victor A. , Aono, Naoki, Aoyama, Tsuyoshi , Ambrose, Barbara A. , Ashton, Neil W., Axtell, Michael J. , Barker, Elizabeth I. , Bonawitz, Nicholas D. , Chapple, Clint , Cheng, Chaoyang , Corrêa, Luiz Gustavo Guedes, Dacre, Michael , DeBarry, Jeremy D. , Drèyer, Ingo , Engstrom, Eric M., Estelle, Mark , Feng, Liang , Finet, Cédric , Floyd, Sandra K., Gramzow, Lydia , Harholt, Jesper , Hattori, Mitsuru , Heyl, Alexander , Hirai, Tadayoshi , Hiwatashi, Yuji , Ishikawa, Masaki , Iwata, Mineko, Karol, Kenneth G. , Koehler, Barbara, Kolukisaoglu, Uener, Kubo, Minoru , Kurata, Tetsuya , Lalonde, Sylvie, Li, Kejie , Litt, Amy , Manning, Gerard , Michael, Todd P. , Miyazaki, Saori , Morinaga, Shin‐Ichi, Murata, Takashi, Nelson, David R. , Obara, Mari, Oguri, Yasuko, Olmstead, Richard G. , Onodera, Naoko T., Petersen, Bent Larsen , Pils, Birgit, Prigge, Michael J. , Riaño‐Pachón, Diego Mauricio , Scheller, Henrik Vibe , Schulz, Burkhard , Schulz, Christian , Shakirov, Eugene V. , Shibagaki, Nakako, Shippen, Dorothy E. , Sørensen, Iben , Sotooka, Ryo, Sugimoto, Nagisa , Sugita, Mamoru , Sumikawa, Naomi, Tanurdžić, Miloš , Theißen, Günter, Ulvskov, Peter , Wakazuki, Sachiko, Weng, Jing‐Ke , Willats, William G. T. , Wipf, Daniel , Wolf, Paul G. , Yang, Lixing , Zimmer, Andreas , Zhu, Qihui , Mitros, Therese , Hellsten, Uffe, Loqué, Dominique , Otillar, Robert, Salamov, Asaf, Shapiro, Harris , Lindquist, Erika , Lucas, Susan , Rokhsar, Daniel S. , Grigoriev, Igor V. , Ashton, Neil W., Barker, Michael S. , Bennetzen, Jeffrey L. , Eliáš, Marek , Frommer, Wolf Bernd , Fujita, Tomomichi , Gutensohn, Michael , Li, Ying , Lyons, Eric H. , Maruyama, Takeshi , Mikami, Koji , Murata, Takashi , Mueller‐Roeber, Bernd , Oguri, Yasuko, Rensing, Stefan Andreas , Roberts, Alison W. , Sato, Yoshikatsu , Shinohara, Naoki , Schmutz, Jeremy

Science | May 5, 2011 | Volume: 332 | Issue: 6032 | Pages: 960-963

10.1126/science.1203810 | PMID 21551031 Get It

The genome sequence of a lycophyte hints at ancient evolutionary transitions.
Hemoglobin A1c Testing Alone Does Not Sufficiently Identify Patients With Prediabetes
Bersoux, Sophie , Burritt, Mary F., Hernandez, James S , Verona, Patricia M , Larson, Marcia H., LaRosa, Carolyn S., Cook, Curtiss B. , Wu, Qing Feng

American Journal of Clinical Pathology | April 18, 2011 | Volume: 135 | Issue: 5 | Pages: 674-677

10.1309/ajcpjbg0wyrahn0r | PMID 21502421 Get It

Abstract Whether hemoglobin A1c (HbA1c) values are suitable for diagnosing diabetes has been debated. We sought to assess the prevalence of elevated HbA1c levels in a prediabetes patient population. Oral glucose tolerance tests and HbA1c levels were analyzed for patients entering a diabetes prevention program between January 1, 2007, and September 13, 2009. We calculated the percentage of patients with impaired fasting glucose (IFG) and/or impaired glucose tolerance (IGT) who had HbA1c values in the 6.0% to 6.4% range or in the 5.7% to 6.4% range. The mean age of the 242 patients was 62 years; 64.0% were women, and 88.0% were white. Isolated IFG was detected in about 56.2% of patients and combined IFG and IGT in about 37.2%. Only 28.5% of patients had HbA1c values in the 6.0% to 6.4% range, whereas 65.3% had values in the 5.7% to 6.4% range. Our data suggest that reliance on HbA1c testing alone to identify candidates for a diabetes prevention program would miss a substantial number of eligible patients.
Pharmacokinetics of Pars Plana Intravitreal Injections versus Microcannula Suprachoroidal Injections of Bevacizumab in a Porcine Model
Olsen, Timothy W. , Feng, Xiao, Wabner, Kathy, Csaky, Karl G. , Cameron, J. Douglas, Pambuccian, Stefan E.

Investigative Opthalmology & Visual Science | March 30, 2011 | Volume: 52 | Issue: 7 | Pages: 4749

10.1167/iovs.10-6291 | PMID 21447680 Get It

Ulcerative Colitis–Associated Colorectal Cancer Arises in a Field of Short Telomeres, Senescence, and Inflammation
Risques, Rosa Ana , Lai, Lisa A. , Himmetoğlu, Çiğdem, Ebaee, Anoosheh, Feng, Ziding , Bronner, Mary P. , Al-Lahham, Bassel, Lindor, Keith D. , Rabinovitch, Peter S. , Brentnall, Teresa A. , Li, Lin , Kowdley, Kris V.

Cancer Research | March 3, 2011 | Volume: 71 | Issue: 5 | Pages: 1669-1679

10.1158/0008-5472.can-10-1966 | PMID 21363920 Get It

Abstract Inflammation plays a role in the progression to cancer and it is linked to the presence of senescent cells. Ulcerative colitis (UC) is a chronic inflammatory disease that predisposes to colorectal cancer. Tumorigenesis in this setting is associated with telomere shortening that can be observed in the nondysplastic epithelium of UC patients with high-grade dysplasia (HGD) or cancer (UC progressors). We hypothesized that a preneoplastic field of inflammation, telomere shortening, and senescence underlies tumor progression in UC progressors. Multiple biopsies of varying histologic grade were collected along the colon of nine UC progressors and analyzed for telomere length, DNA damage, senescence, p53, p16, and chronic and acute inflammation. Twenty biopsies from four UC nonprogressors and twenty-one biopsies from control individuals without UC were also analyzed. Short telomeres and increased DNA damage, senescence, and infiltrating leukocytes were observed in biopsies located less than 10 cm from HGD or cancer. Low-grade dysplasia (LGD) had the shortest telomeres along with the highest levels of senescence and infiltrating leukocytes, whereas HGD biopsies showed the opposite pattern. The expression of p16 and p53 was low in nondysplastic biopsies but progressively increased in LGD and HGD. In addition, high levels of infiltrating leukocytes were associated with telomere shortening, senescence, and reduced p53 expression. These results suggest that dysplasia arises in a preneoplastic field of chronic inflammation, which leads to telomere shortening, DNA damage, and senescence. Our findings argue that senescence acts as a tumor suppressor mechanism that is abrogated during the transition from LGD to HGD in UC. Cancer Res; 71(5); 1669–79. ©2011 AACR.
Abstract LB-186: Genetic variants and risk of lung cancer in never-smokers: A genome-wide association study
Ye, Yuanqing , Chang, Shen‐Chih , Aubry, Marie‐Christine, Aakre, Jeremiah A. , Cunningham, Julie M. , Deschamps, Claude, Jiang, Ruoxiang , Lin, Jie , Marks, Randolph, Su, Li , Vasmatzis, George , Wang, Renyi , Harris, Curtis C. , Spitz, Margaret R., Jen, Jin , Wu, Xifeng , Li, Yafei , Sheu, Chau‐Chyun , Andrade, Mariza de , Wang, Liang , Allen, Mark S. , Chen, Feng , Pankratz, V. Shane , Li, Yan , Sun, Zhifu , Tang, Hui Jun , Zhang, Zuo‐Feng , Christiani, David C. , Yang, Ping

Cancer Research | February 25, 2011 | Volume: 70 | Issue: 8_Supplement | Pages: LB-186-LB-186

10.1158/1538-7445.am10-lb-186 Get It

Abstract Citation Format: {Authors}. {Abstract title} [abstract]. In: Proceedings of the 101st Annual Meeting of the American Association for Cancer Research; 2010 Apr 17-21; Washington, DC. Philadelphia (PA): AACR; Cancer Res 2010;70(8 Suppl):Abstract nr LB-186.
Abstract 4826: International Lung Cancer Consortium: Pooled analysis of previous lung diseases and lung cancer risk
Brenner, Darren R. , Bickeböller, Heike , Wichmann, Erich, Schwartz, Ann G. , Friis, Søren, Field, John K. , McLaughlin, John R., Lan, Qing , Park, Bernard J. , Hung, Rayjean J., Boffetta, Paolo , Duell, Eric J. , Rosenberger, Albert , Muscat, Joshua E. , Yang, Ping , Tjønneland, Anne , Marchand, Loı̈c Le , Zhang, Zuo‐Feng , Lazarus, Philip J. , McLaughlin, John R., Wiencke, John K. , Neri, Monica , Orlow, Irene , Hung, Rayjean J., Field, John K , Bickeböller, Heike

Cancer Research | February 25, 2011 | Volume: 70 | Issue: 8_Supplement | Pages: 4826-4826

10.1158/1538-7445.am10-4826 Get It

Abstract To clarify the role of previous lung diseases (PLDs) (chronic bronchitis, emphysema, pneumonia, tuberculosis, asbestosis and silicosis) in the development of lung cancer we conducted a pooled analysis in the International Lung Cancer Consortium (ILCCO). Data from 16 studies (9 population based case-control, 4 hospital based case-control, 2 mixed case-control and 1 cohort - 10 from North America, 5 from Europe and 1 from Asia) were pooled, including 24044 cases and 81256 controls. Study-specific effect estimates were derived using logistic regression models for case-control studies and Cox proportional hazards models for cohort studies adjusted for age, sex, education and pack-years of smoking. Effect estimates were then pooled using random effects models where summary effects for each of the PLDs were evaluated separately. Stratified analyses were conducted based on smoking status, histology and study design or control source. Heterogeneity was evaluated using the Cochrane Q statistic and Galbraith plots, and publication bias was evaluated using funnel plots as well as the Begg test. A previous history of emphysema conferred a relative risk (RR) of 2.17, 95% confidence interval (CI): 1.67-2.82 (from 15 studies, p-het<.001). A previous history of chronic bronchitis conferred a RR of 1.49, 95% CI: 1.33-1.60 (from 12 studies, p-het.=0.434). Tuberculosis was associated with a RR of 1.54, 95% CI: 1.19-1.99 (from 15 studies, p-het.=0.001). Both asbestosis (RR 2.51, 95% CI: 1.53-4.12 (from 7 studies, p-het=0.379)) and silicosis (RR 1.70, 95% CI: 1.15-2.54, (from 3 studies, p-het. p=0.476)) were also associated with lung cancer risk. When the outlying studies were removed, effect estimates changed minimally and heterogeneity was reduced. Findings were consistent in subgroup analyses by smoking status and histology (adenocarcinoma, squamous cell carcinoma and small cell lung cancer). Effect estimates among never smokers were for emphysema a RR of 2.21, 95% CI: 0.99-4.90 (from 8 studies), for chronic bronchitis 1.12, 95% CI: 0.78-1.62 (from 9 studies), for pneumonia 1.37, 95% CI: 1.10-1.70 (from 10 studies) and for tuberculosis 1.54, 95% CI: 0.99-2.39 (from 9 studies). In this analysis of data from multiple continents, PLDs were associated with an increased risk of lung cancer. The evidence among never smokers supports a direct relationship between previous lung diseases and lung cancer. Citation Format: {Authors}. {Abstract title} [abstract]. In: Proceedings of the 101st Annual Meeting of the American Association for Cancer Research; 2010 Apr 17-21; Washington, DC. Philadelphia (PA): AACR; Cancer Res 2010;70(8 Suppl):Abstract nr 4826.
Abdominal CT: Comparison of Low-Dose CT With Adaptive Statistical Iterative Reconstruction and Routine-Dose CT With Filtered Back Projection in 53 Patients
Sagara, Yoshiko , Hara, Amy K., Pavlicek, William , Silva, Alvin C. , Paden, Robert G., Wu, Qing Feng

American Journal of Roentgenology | August 20, 2010 | Volume: 195 | Issue: 3 | Pages: 713-719

10.2214/ajr.09.2989 | PMID 20729451 Get It

Progressive renal papillary calcification and ureteral stone formation in mice deficient for Tamm-Horsfall protein
Liu, Yan , Mo, Lan , Goldfarb, David S. , Evan, Andrew P., Liang, Feng‐Xia , Khan, Saeed R. , Wu, Xue‐Ru , Lieske, John C. , Goldfarb, David S

American Journal of Physiology-Renal Physiology | July 12, 2010 | Volume: 299 | Issue: 3 | Pages: F469-F478

10.1152/ajprenal.00243.2010 | PMID 20591941 Get It

Mammalian urine contains a range of macromolecule proteins that play critical roles in renal stone formation, among which Tamm-Horsfall protein (THP) is by far the most abundant. While THP is a potent inhibitor of crystal aggregation in vitro and its ablation in vivo predisposes one of the two existing mouse models to spontaneous intrarenal calcium crystallization, key controversies remain regarding the role of THP in nephrolithiasis. By carrying out a long-range follow-up of more than 250 THP-null mice and their wild-type controls, we demonstrate here that renal calcification is a highly consistent phenotype of the THP-null mice that is age and partially gene dosage dependent, but is gender and genetic background independent. Renal calcification in THP-null mice is progressive, and by 15 mo over 85% of all the THP-null mice develop spontaneous intrarenal crystals. The crystals consist primarily of calcium phosphate in the form of hydroxyapatite, are located more frequently in the interstitial space of the renal papillae than intratubularly, particularly in older animals, and lack accompanying inflammatory cell infiltration. The interstitial deposits of hydroxyapatite observed in THP-null mice bear strong resemblances to the renal crystals found in human kidneys bearing idiopathic calcium oxalate stones. Compared with 24-h urine from the wild-type mice, that of THP-null mice is supersaturated with brushite (calcium phosphate), a stone precursor, and has reduced urinary excretion of citrate, a stone inhibitor. While less frequent than renal calcinosis, renal pelvic and ureteral stones and hydronephrosis occur in the aged THP-null mice. These results provide direct in vivo evidence indicating that normal THP plays an important role in defending the urinary system against calcification and suggest that reduced expression and/or decreased function of THP could contribute to nephrolithiasis.
Reducing the Radiation Dose for CT Colonography Using Adaptive Statistical Iterative Reconstruction: A Pilot Study
Flicek, Kristina T. , Hara, Amy K., Silva, Alvin C. , Peter, Mary Beth, Johnson, C. Daniel, Wu, Qing Feng

American Journal of Roentgenology | June 21, 2010 | Volume: 195 | Issue: 1 | Pages: 126-131

10.2214/ajr.09.3855 | PMID 20566805 Get It