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6724 citation(s) found for "Wu, Mark".

A Retrospective, Comparative Cohort Analysis of the Utilization of Voriconazole-Containing Regimens Versus Itraconazole in the Treatment of Blastomycosis
Schanz, Caitlin , Rivera, Christina G. , Saleh, Omar M. Abu, Clement, Josh , Enzler, Mark J., Firkus, Danielle , Mara, Kristin C. , Vergidis, Paschalis , Stevens, Ryan W. , Schanz, Caitlin C , Mara, Kristin C , Vergidis, Paschalis , Rivera, Christina G , Stevens, Ryan W , Schanz, Caitlin C., Saleh, Omar Abu

Journal of Fungi | April 14, 2026 | Volume: 12 | Issue: 4 | Pages: 279

10.3390/jof12040279 | PMID 42042373 Get It

Itraconazole is the recommended first-line antifungal agent in blastomycosis treatment. However, pharmacokinetic limitations and adverse drug events may necessitate the use of alternative antifungal agents. The primary objective of the study was to retrospectively describe a cohort of patients with blastomycosis who received voriconazole (as partial or complete therapy), for complete or partial treatment, compared to those who received itraconazole alone. Secondary objectives included rationale for voriconazole selection, treatment response, mortality, and adverse drug events. This retrospective multicenter cohort study included adult patients with proven/probable blastomycosis who received itraconazole or voriconazole. Treatment response was evaluated at one year or end of therapy, whichever came first. Mortality outcomes were assessed within 7 days of the last documented azole dose. Propensity score weighting and subgroup analysis were utilized to control confounding variables between cohorts. A total of 119 patients receiving itraconazole and 25 receiving voriconazole as complete or partial treatment were included. Voriconazole was often selected for CNS involvement or after intolerance to alternative azoles. After propensity score weighting, no significant difference in complete or partial treatment response was observed. Rates of all-cause mortality and blastomycosis-related mortality were numerically higher in the voriconazole cohort. Adverse drug event rates were similar between cohorts; however, discontinuation due to adverse events was more common in the voriconazole cohort. Voriconazole was most utilized for the treatment of blastomycosis in cases with CNS involvement or intolerance to other azoles. A statistically significant difference in response rate was not identified between voriconazole-containing or itraconazole-treated patients; however, given limited sample sizes, further data is needed to assess the equivalency of these agents in the treatment of blastomycosis.
Incidence of infective endocarditis following surgical or transcatheter mitral valve repair or replacement: a systematic review and meta-analysis
Vibhishanan, Jonathan , Zorman, Mark , Malik, Basimah T, Coronelli, Marco , Kumar, Akshaya, Hampshire, Jonathan , Heylen, Katherine, Choksey, Anurag , Eastwick-Jones, Kate , Newton, James D. , Prendergast, B, Cahill, T, Zorman, Mark J , Dawkins, Sam , Prendergast, Bernard , Cahill, Thomas J.

European Heart Journal - Valvular and Structural Heart Disease | April 13, 2026 | Volume: 2 | Issue: 2 | Pages: No page available

10.1093/ehjvshd/xwag030 Get It

Abstract Aims Infective endocarditis (IE) is a serious and potentially fatal complication of mitral valve (MV) intervention. There are limited data comparing the incidence of IE after MV repair compared with bioprosthetic MV replacement. The aim of this study was to analyse the incidence and timing of IE after MV repair compared with bioprosthetic valve replacement, in both surgical and transcatheter patient populations. Methods and results A literature search of Medline, Embase, and Cochrane Library (January 2000—September 2025) was conducted. Pooled IE incidence rates were derived using random-effects models. Eighty-two studies (80 939 patients, total follow-up 350 252 patient-years) were included. The overall incidence rate of IE was 0.97 per 100-patient-years (95% confidence interval [CI] 0.71–1.34). IE was more common after surgical MV replacement (SMVR) than surgical MV repair (SMVr): incidence rate 0.93 (95% CI 0.41–1.81) vs 0.39 (95% CI 0.25–0.62) per 100-patient-years, incidence rate ratio (IRR) 2.34 (95% CI 1.06–5.18), P = .035. The incidence of IE after transcatheter MV replacement (TMVR) was comparable to transcatheter MV repair (TMVr) (2.88 [95% CI 1.91–4.33] vs 1.70 [95% CI 0.84–3.43] per 100-patient-years), IRR 1.56 (95% CI 0.73–3.34), P = .250. The cumulative incidence of IE following SMVR was significantly higher than following SMVr at 1- and 2-years post-procedure, but not at 6 months. Conclusions IE is an infrequent complication of mitral valve intervention. The incidence of IE following SMVR is significantly higher than following SMVr, while the incidence of IE following TMVR is numerically but not significantly higher than following TMVr. Reducing IE risk after mitral intervention is a clinical and research priority.
Social network intervention for cardiovascular risk reduction among Hispanic and Somali adults: a cluster randomized trial
Molina, Luz, Goodson, Miriam, Capetillo, Graciela Porraz, Osman, Ahmed, Ahmed, Yahye, Nur, Omar, Iteghete, Sheila, Dirie, Hana, Clark, Matthew M. , Njeru, Jane W. , Pardo, Laura Suarez, Zeratsky, Katherine, Rieck, Thomas, Herrin, Jeph, Wieland, Mark L. , Molina, Luz, Goodson, Miriam, Ahmed, Yahye, Lohr, Abby M. , Patten, Christi A. , Zeratsky, Katherine, Rieck, Thomas , Herrin, Jeph , Valente, Thomas William , Sia, Irene G. , Wieland, Mark L , Porraz Capetillo, Graciela, Patten, Christi , Suarez Pardo, Laura, Herrin, Jeph

Annals of Behavioral Medicine | April 13, 2026 | Volume: 60 | Issue: 1 | Pages: No page available

10.1093/abm/kaag020 | PMID 42847369 Get It

Abstract Background Immigrants to the United States often face challenges from limited healthcare access and less healthy environments which contribute to rising obesity and cardiovascular risk. Purpose To assess the feasibility and effectiveness of a community-based social network intervention for cardiovascular risk reduction among Hispanic and Somali adults. Methods A social network-informed, community-based participatory research-derived health promotion intervention was delivered by Hispanic and Somali lay health promoters (HPs) to members of their social networks over 1 year (12 biweekly sessions in months 0-6; 12 biweekly check-ins in months 7-12). Using a closed-cohort stepped wedge cluster randomized design, social networks were randomly assigned to receive the intervention immediately or after a delay of 1 year. Measurements at baseline, 6 months, and 12 months were derived from 6 of the American Heart Association’s “Life’s Simple 7”: BMI, blood pressure, fasting glucose, cholesterol, physical activity and dietary quality (range 0-12, with higher values indicating lower cardiovascular risk). Waist circumference and proportion of participants who achieved >5% body weight loss were also assessed. Results Four hundred seventy-five participants were enrolled among 51 HPs (29 Hispanic; 22 Somali). There was a statistically significant improvement in cardiovascular risk in the intervention group (n = 246) compared with controls (n = 229) at 6 months (0.4 [1.8] vs. −0.1 [1.7]; P = .03) that was not sustained at 12 months (0.5 [1.9] vs. 0.3 [1.8]; P = .38). There was a statistically significant higher proportion of participants who lost >5% of body weight in the intervention group compared with controls at 12 months (37% [15] vs. 18% [7.9]; P = .02). Reductions in weight and waist circumference in the intervention group compared with controls did not achieve statistical significance. Conclusion A social network intervention, delivered by lay HPs was feasible and resulted in a modest improvement of cardiovascular risk and clinically significant weight loss. Clinical Trial Identification Number NCT05136339.
Interpretable variant effect prediction from genomic foundation model representations
Pearce, Michael T, Dooms, Thomas , Yamamoto, Ryō , Ayanian, Shant , Ryu, Alexander J. , Meehl, Joshua , Molnar, Carl , Kiiskinen, Tuomo , Bissell, Mark, Hazra, Dron , Fang, Ching, Nguyen, Nam, Anderson, Michael, Osborne, Collin , Toomey, Bridget , Klee, Eric W. , Korfiatis, Panagiotis , Redlon, Matt , Jain, Archa , Balsam, Daniel, Wang, Nicholas K. , Pearce, Michael T., Dooms, Thomas, Ryu, Alexander J. , Duffy, Patrick Emmet , Myasoedova, Elena

No container title available | April 12, 2026 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.64898/2026.04.10.717844 Get It

Abstract Scientific foundation models learn high-dimensional representations from diverse data modalities, yet what they encode and how to extract that knowledge remain open questions. Here we show that probing the internal representations of Evo 2, a 7-billion-parameter genomic foundation model, enables accurate and interpretable genetic variant effect prediction. We introduce a covariance-based probe that captures second-order structure from Evo 2 sequence embeddings to predict variant pathogenicity across variant types and functional consequences, matching or exceeding specialized predictors within their domains. To ground these predictions in known biological mechanisms, we train a complementary panel of probes on existing annotations to detect which genomic properties are disrupted by a variant. This categorized evidence is then integrated with each variant’s genomic context through a language model to generate variant-specific mechanistic hypotheses. Our pathogenicity predictions correlate with experimental measures of variant function, clinical penetrance, and biobank disease associations while the mechanistic hypotheses are consistent with expert reviews, known mechanism classes, and downstream molecular readouts. We release pathogenicity scores, disruption profiles, and contextualized interpretations for 4.2 million variants from the ClinVar database as an open resource through the Evo Variant Effect Explorer (EVEE). More broadly, this structured probing approach offers a general framework for interrogating foundation models across scientific disciplines and grounding their outputs in existing domain concepts.
CNS tumor type prevalence according to age group: An analysis of 21 000 cases confirmed by methylation profiling, with a focus on adolescents and young adults
Fonseca, Adriana , Yefet, Leeor, Singh, Omkar , Dampier, Christopher H. , Dazelle, Karen , Lam, Michelle , Abdullaev, Zied , Chung, Hye‐Jung, Quezado, Martha, Raffeld, Mark , Lee, Ina, Nasrallah, MacLean, Bennett, Julie, Bouffet, Eric, Poria, Dipak, Wesseling, Pieter, Bent, Martin van den, Wen, Patrick Y, Varlet, Pascale, Tauziède-Espariat, Arnault, Zadeh, Gelareh, Aldape, Kenneth, Singh, Omkar , Dampier, Christopher H , Quezado, Martha , Gagan, Jeffrey , Lee, Ina , Nasrallah, MacLean , Bennett, Julie , Bouffet, Eric , Poria, Dipak , Wesseling, Pieter , van den Bent, Martin J , Wen, Patrick Yung , Varlet, Pascale , Tauziède-Espariat, Arnault , Ida, Cristiane M , Zadeh, Gelareh , Aldape, Kenneth , Yefet, Leeor S. , Gagan, Jeffrey , Nasrallah, MacLean P. , Bouffet, Éric , Wesseling, Pieter , Bent, Martin J. van den , Ida, Cristiane M. , Zadeh, Gelareh

Neuro-Oncology | April 11, 2026 | Volume: 28 | Issue: 7 | Pages: 1808-1820

10.1093/neuonc/noag082 | PMID 41978543 Get It

Abstract Background Approximately 12 000 adolescents and young adults (ages 15-39, AYAs) are diagnosed with a primary central nervous system (CNS) tumor each year. DNA methylation profiling has transformed CNS tumor classification by refining diagnostic accuracy and identifying biologically distinct subtypes, but its application has not been systematically evaluated in the AYA population. In this study, we examined the spectrum of CNS tumor types across age groups, with a focus on the AYA population. Methods We assembled a large dataset of CNS tumor samples with age annotations and methylation profiles matching with high confidence to a CNS tumor type using the NCI/Bethesda classifier. Prevalence of tumor type, methylation class and DNA copy number aberrations were compared across age strata (pediatric, AYA, and adult). Results The cohort of 21 712 CNS tumors included 5351 tumors from AYAs (25%), which showed a mixed pattern, with tumors typical of childhood (eg, medulloblastoma) as well as those common in older adults (eg, glioblastoma). Several tumor types were specifically enriched in the AYA, including IDH-mutant astrocytoma, pleomorphic xanthoastrocytoma, posterior fossa group B ependymoma, and diffuse hemispheric glioma, H3 G34-mutant, among others. Distinct methylation subclasses of multiple tumor types were observed in the AYA, and patterns of genomic aberrations showed age-specific distributions. Conclusion Large-scale methylation profiling revealed unique classification patterns of CNS tumors in AYAs, with specific tumor types, subclasses, and genomic alterations enriched in this population. These data may serve as a valuable reference resource for better understanding the spectrum of CNS tumors affecting AYA patients.
Therapy-specific motoneuron activation with epidural and dorsal root ganglion stimulation in spinal cord injury
Anders, Jennifer , Gill, Megan L., Fernandez, K. A. , Veith, Daniel D. , Linde, Margaux B. , Mills, Candee J. , Thoreson, Andrew R. , Hagedorn, Jon, Bendel, Mark A. , Iqbal, Rayyan A. , Grahn, Peter J. , Asp, Anders J , Fernandez, K A , Hagedorn, Jon M, Sayenko, Dimitry G , Solinsky, Ryan , Grahn, Peter J , Hagedorn, Jonathan M. , Bendel, Mark A., Sayenko, Dimitry G. , Solinsky, Ryan , Zhao, Kristin D.

Journal of Neurophysiology | April 11, 2026 | Volume: 135 | Issue: 5 | Pages: 1220-1230

10.1152/jn.00438.2025 | PMID 41963069 Get It

Epidural and dorsal root stimulation have emerged as promising therapies to restore function after spinal cord injury. However, how each modality uniquely or jointly engages spinal circuits remains unclear. To address this, we analyzed leg electromyography (EMG) responses to epidural stimulation (ES) and dorsal root ganglia stimulation (DRGS) delivered to the lumbosacral cord in the same individuals.
Intratumoural oncolytic HSV-1 reshapes the local and systemic immune landscape through CD8 ⁺ T cell reprogramming
Appleton, Elizabeth Stefanie, Roulstone, Victoria , Portillo, Mikel, Hassan, Jehanne , Hubbard, Lisa, Kyula, Joan, Dean, Isaac , López, Ernesto , Pedersen, Malin , Rullan, Antonio, Tye, Chanidapa, Allen, Mark, Baldock, Holly , Rowley, Jessica, Patin, Emmanuel, Taylor, Alex, Wongariyapak, Amarin , Mohan, Nitya , Leslie, Isla, Liseth, Olivia , Vile, Richard, Arwert, Esther, Jones, Sylwia , Bommareddy, Praveen, Coffin, Robert, Harrington, K., Dean, Isaac , Appleton, Elizabeth , Patrikeev, Anton , Foo, Shane , Hubbard, Lisa, Kyula, Joan , Hak, Charleen Chan Wah , Tye, Chanidapa Adele , Patin, Emmanuel C. , Kendall, Benjamin L. , Vile, Richard G. , Arwert, Esther N. , Bommareddy, Praveen K. , Ono, Masahiro , Harrington, Kevin, Melcher, Alan

No container title available | April 10, 2026 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.64898/2026.04.07.716986 Get It

Abstract Most oncolytic viruses are delivered by intratumoural injection, and local administration can induce regression of both injected and distant tumours in mice and patients. However, the mechanisms by which local viral infection reprograms systemic immunity remain poorly understood. Here we show that intratumoural RP1, an oncolytic HSV-1 encoding GM-CSF and GALV-GP-R ⁻ , drives regression of injected and uninjected murine melanoma tumours and prolongs survival. RP1 elicits coordinated CD4 ⁺ and CD8 ⁺ T cell infiltration accompanied by local cytokine remodelling, reshaping the immune landscape at both tumour sites. Leveraging the Timer of Cell Kinetics and Activity (Tocky) system and Kaede photoconvertible protein technology, we resolve the temporal dynamics of CD8 ⁺ T cell responses following local virotherapy and identify two systemically induced, virus-driven CD8 ⁺ T cell populations distinguished by TCR engagement kinetics: antigen-engaged Timer-positive ‘viral-induced precursors’ (VIPs) and Timer-negative KLRG1 ⁺ ‘viral-induced terminal effectors’ (VITEs). Single-cell transcriptomic and pseudotime analyses reveal divergent differentiation trajectories; VIPs exhibit sustained antigen engagement within the tumour microenvironment (TME), a transcriptional programme associated with self-renewal, and preferential homing to draining lymph nodes. A VIP-associated gene signature correlates with clinical response to RP1 plus PD-1 blockade in the IGNYTE trial of RP1 and nivolumab in PD-1-refractory melanoma and is independently associated with response to immune checkpoint inhibitor (ICI) therapy in melanoma. These findings establish a mechanistic link between local oncolytic virotherapy, systemic CD8 ⁺ T cell reprogramming, and durable regression of distant lesions in patients.
Predictors of complete molecular response and impact of allogeneic hematopoietic stem cell transplantation on outcome in patients with Philadelphia chromosome positive acute lymphoblastic leukemia (ALL): results from the Consortium on Myeloid Malignancies
Mohty, Razan , Narra, Ravi , Hunter, Cameron, Shallis, Rory M. , Jamy, Omer , Coltoff, Alexander , Othman, Tamer , Jonas, Brian A. , Patel, Anand , Foucar, Charles , Abdelsamia, Mahmoud , Palmisiano, Neil , Curran, Emily, Advani, Anjali, Atallah, E., Litzow, Mark R., Shallis, Rory M , Othman, Tamer , Jonas, Brian , Patel, Anand , Patel, Shyam A , Badar, Talha , Jamy, Omer , Mims, Alice S , Hunter, Cameron, Kota, Vamsi , DuVall, Adam , Patel, Shyam A. , Curran, Emily , Omer, Zulfa , Advani, Anjali S. , Atallah, Ehab , Litzow, Mark R. , Badar, Talha

Leukemia & Lymphoma | April 9, 2026 | Volume: 67 | Issue: 7 | Pages: 1587-1594

10.1080/10428194.2026.2650679 | PMID 41954351 Get It

Primary Care Clinicians’ Attitudes on Digital Care Collaborative Management for Substance Use Disorders
Lai, Benjamin , Bormann, N. L., Arndt, Stephan, Smith, Jamie, Stoppel, Cynthia , Tuen, Kelsey, Cox, Danielle, Breitinger, Scott , Williams, Mark, Paul, Margaret, Lai, Benjamin , Bormann, Nicholas L. , Arndt, Stephan , Paul, Margaret M. , Oesterle, Tyler

INQUIRY: The Journal of Health Care Organization, Provision, and Financing | April 9, 2026 | Volume: 63 | Issue: No issue available | Pages: No page available

10.1177/00469580261440482 | PMID 41954165 Get It

Substance use disorders (SUD) remain a significant source of morbidity and mortality in the United States, and access to treatment continues to be inadequate. Primary Care Clinicians (PCCs) are well-positioned to provide long-term SUD care for patients. However, multiple provider-level barriers exist. Collaborative Care Management (CoCM) has proven successful in supporting PCCs in treating psychiatric conditions, such as depression. Our group proposes an addiction-focused modified CoCM that leverages telemedicine and an electronic platform (Senyo) into primary care. This study assesses PCCs’ attitudes toward this proposed model and their likelihood (with support) of prescribing medications for alcohol and opioid use disorder. To achieve this, an anonymized and confidential electronic survey was deployed to all 489 of our institutions’ PCCs. Eighty-five completed the survey (17.4% response); the majority (94%) agreed that digital CoCM for SUD will be helpful for their practice, and 85% expressed agreement that such a model will increase their confidence and likelihood to prescribe anti-craving medications. Additionally, we found that PCCs’ comfort level in addressing SUD with patients is not associated with years in practice, clinician type (attending physicians, resident/fellow physicians, nurse practitioner or physician assistant), or their perception of currently available SUD treatment resources. Future work to evaluate practice changes, including rates of anti-craving medication prescribing and SUD-treatment outcomes after implementation of our digital CoCM will prove useful in determining the effectiveness of this model.
Hemodynamic and Clinical Outcomes of Transcatheter Valve Expansion in Degenerated Mitral Bioprostheses
Zorman, Mark , Foster, Kaleb , Guerrero, Mayra , Rihal, Charanjit S. , Eleid, Mackram F. , Zorman, Mark J , Kietselaer, Bas L J H , Guerrero, Mayra E , Rihal, Charanjit S. , Eleid, Mackram F , Kietselaer, Bas

Circulation: Cardiovascular Interventions | April 9, 2026 | Volume: 19 | Issue: 7 | Pages: No page available

10.1161/circinterventions.125.016270 | PMID 41953974 Get It

BACKGROUND: Transcatheter mitral valve-in-valve replacement is an established therapy for intermediate and high-risk patients with degenerated bioprostheses, but restricted transcatheter valve (THV) expansion within rigid surgical frames and elevated gradients have raised durability concerns. This study aimed to evaluate midterm outcomes of mitral valve-in-valve patients according to THV expansion and sizing strategy. METHODS: Patients who underwent mitral valve-in-valve with balloon-expandable valves at Mayo Clinic Rochester between 2014 and 2023 were retrospectively analyzed. THV expansion (inflow, waist, outflow) was measured from procedural fluoroscopy and indexed to nominal size, with zero indicating expansion to nominal dimensions. Median index values were used as subgroup cutoffs to compare the incidence of the primary composite outcome of all-cause mortality, heart failure readmission, and valve reintervention. RESULTS: The analysis included 80 patients with a median follow-up of 2.5 years. A total of 53 (66%) valves were underexpanded across all 3 sizes, with median inflow, waist, and outflow expansion indices of −10.2, −16.2, and −3.2, respectively. Across all indices, THV expansion closer to nominal size was associated with lower rates of the primary outcome ( P <0.05). Greater expansion correlated with a larger mitral valve area and lower transvalvular mean gradient. Oversized THVs were significantly less expanded and had a higher incidence of the primary composite outcome compared with recommended-size THVs ( P =0.02). CONCLUSIONS: THV underexpansion in degenerated mitral bioprostheses is common and associated with elevated gradients and worse midterm outcomes. Further research is warranted to define THV expansion targets and improve outcomes following mitral valve-in-valve intervention.