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1413 citation(s) found for "Yu, Chan".

Reprogramming of tau alternative splicing by spliceosome-mediated RNA trans-splicing: Implications for tauopathies
Rodríguez-Martín, Teresa, Mansfield, S. Gary, Grover, Andrew, Hutton, Michael , Yu, Qingming, Zhou, Jianhua , Anderton, Brian H., Gallo, Jean‐Marc , García-Blanco, Mariano A.

Proceedings of the National Academy of Sciences | October 17, 2005 | Volume: 102 | Issue: 43 | Pages: 15659-15664

10.1073/pnas.0503150102 | PMID 16230627 Get It

Frontotemporal dementia with parkinsonism linked to chromosome 17 (FTDP-17) is caused by mutations in the gene encoding the microtubule-associated protein, tau. Some FTDP-17 mutations affect exon 10 splicing. To correct aberrant exon 10 splicing while retaining endogenous transcriptional control, we evaluated the feasibility of using spliceosome-mediated RNA trans-splicing (SMaRT) to reprogram tau mRNA. We designed a pre-trans-splicing molecule containing human tau exons 10 to 13 and a binding domain complementary to the 3′ end of tau intron 9. A minigene comprising tau exons 9, 10, and 11 and minimal flanking intronic sequences was used as a target. RT-PCR analysis of SH-SY5Y cells or COS cells cotransfected with a minigene and a pre-trans-splicing molecule using primers to opposite sides of the predicted splice junction generated products containing exons 9 to 13. Sequencing of the chimeric products showed that an exact exon 9–exon 10 junction had been created, thus demonstrating that tau RNA can be reprogrammed by trans-splicing. Furthermore, by using the same paradigm with a minigene containing full-length intronic sequences, we show that cis-splicing exclusion of exon 10 can be by-passed by trans-splicing and that conversion of exon 10 – tau RNA into exon 10 + tau RNA could be achieved with ≈34% efficiency. Our results demonstrate that an alternatively spliced exon can be replaced by trans-splicing and open the way to novel therapeutic applications of SMaRT for tauopathies and other disorders linked to aberrant alternative splicing.
A Specific Heptapeptide from a Phage Display Peptide Library Homes to Bone Marrow and Binds to Primitive Hematopoietic Stem Cells
Nowakowski, Grzegorz S. , Dooner, Mark S. , Valinski, Helen, Mihaliak, Alicia M., Quesenberry, Peter J. , Becker, Pamela S.

STEM CELLS | November 9, 2004 | Volume: 22 | Issue: 6 | Pages: 1030-1038

10.1634/stemcells.22-6-1030 | PMID 15536193 Get It

Multicenter Phase II Study of the Oral MEK Inhibitor, CI-1040, in Patients With Advanced Non-Small-Cell Lung, Breast, Colon, and Pancreatic Cancer
Rinehart, John J., Adjei, Alex A. , LoRusso, Patricia , Hecht, J. Randolph , Natale, Ronald B., Hamid, Oday , Varterasian, Mary , Asbury, Peggy, Kaldjian, Eric, Gulyas, Stephen, Mitchell, David, Herrera, Román, Chan, Anthony T.�C. , Waterhouse, David , Sebolt–Leopold, Judith S. , Meyer, Mark B.

Journal of Clinical Oncology | October 14, 2004 | Volume: 22 | Issue: 22 | Pages: 4456-4462

10.1200/jco.2004.01.185 | PMID 15483017 Get It

Purpose This multicenter, open-label, phase II study was undertaken to assess the antitumor activity and safety of the oral mitogen-activated extracellular signal regulated kinase kinase (MEK) inhibitor, CI-1040, in breast cancer, colon cancer, non-small-cell lung cancer (NSCLC), and pancreatic cancer. Patients and Methods Patients with advanced colorectal, NSCLC, breast, or pancreatic cancer received oral CI-1040 continuously at 800 mg bid. All patients had measurable disease at baseline, a performance status of 2 or less, and adequate bone marrow, liver, and renal function. Expression of pERK, pAkt, and Ki-67 was assessed in archived tumor specimens by quantitative immunohistochemistry. Results Sixty-seven patients with breast (n = 14), colon (n = 20), NSCLC (n = 18), and pancreatic (n = 15) cancer received a total of 194 courses of treatment (median, 2.0 courses; range, one to 14 courses). No complete or partial responses were observed. Stable disease (SD) lasting a median of 4.4 months (range, 4 to 18 months) was confirmed in eight patients (one breast, two colon, two pancreas, and three NSCLC patients). Treatment was well tolerated, with 81% of patients experiencing toxicities of grade 2 or less severity. Most common toxicities included diarrhea, nausea, asthenia, and rash. A mild association (P < .055) between baseline pERK expression in archived tumor specimens and SD was observed. Conclusion CI-1040 was generally well tolerated but demonstrated insufficient antitumor activity to warrant further development in the four tumors tested. PD 0325901, a second generation MEK inhibitor, has recently entered clinical development and, with significantly improved pharmacologic and pharmaceutical properties compared with CI-1040, it may better test the therapeutic potential of MEK inhibition in cancer.
Changes in Tensile Strength of Cadaveric Human Fascia Lata After Implantation in a Rabbit Vagina Model
Walter, Andrew J., Morse, Abraham N. , Leslie, Kevin O., Zobitz, Mark E., Hentz, Joseph G. , Cornella, Jeffrey L.

Journal of Urology | August 25, 2004 | Volume: 169 | Issue: 5 | Pages: 1907-1910

10.1097/01.ju.0000061182.21353.a5 | PMID 12686871 Get It

Idiopathic Interstitial Pneumonia
Flaherty, Kevin R. , King, Talmadge E. , Raghu, Ganesh , Lynch, Joseph P., Colby, Thomas V. , Gross, Barry H., Kazerooni, Ella A. , Toews, Galen B., Long, Qi , Murray, Susan , Lama, Vibha N. , Gay, Steven E., Long, Qi , Travis, William D. , Martínez, Fernando J. , Long, Qi

American Journal of Respiratory and Critical Care Medicine | July 15, 2004 | Volume: 170 | Issue: 8 | Pages: 904-910

10.1164/rccm.200402-147oc | PMID 15256390 Get It

Abstract Current guidelines recommend that the clinician, radiologist, and pathologist work together to establish a diagnosis of idiopathic interstitial pneumonia. Three clinicians, two radiologists, and two pathologists reviewed 58 consecutive cases of suspected idiopathic interstitial pneumonia. Each participant was provided information in a sequential manner and was asked to record their diagnostic impression and level of confidence at each step. Interobserver agreement improved from the beginning to the end of the review. After the presentation of histopathologic information, radiologists changed their diagnostic impression more often than did clinicians. In general, as more information was provided the confidence level for a given diagnosis improved, and the diagnoses rendered with a high level of confidence were more likely congruent with the final pathologic consensus diagnosis. The final consensus pathologist diagnosis was idiopathic pulmonary fibrosis in 30 cases. Clinicians identified 75% and radiologists identified 48% of these cases before presentation of the histopathologic information. Histopathologic information has the greatest impact on the final diagnosis, especially when the initial clinical/radiographic diagnosis is not idiopathic pulmonary fibrosis. We conclude that dynamic interactions between clinicians, radiologists, and pathologists improve interobserver agreement and diagnostic confidence.
Enhanced Monocyte Chemoattractant Protein-3/CC Chemokine Ligand-7 in Usual Interstitial Pneumonia
Choi, Esther , Carpenter, Kristin J., Kunkel, Steven L. , Evanoff, Holly, Flaherty, Kevin R. , Toews, Galen B., Colby, Thomas V. , Kazerooni, Ella A. , Gross, Barry H., Hogaboam, Cory M. , Jakubzick, Claudia , Martínez, Fernando J. , Travis, William D.

American Journal of Respiratory and Critical Care Medicine | June 15, 2004 | Volume: 170 | Issue: 5 | Pages: 508-515

10.1164/rccm.200401-002oc | PMID 15191918 Get It

Abstract Chemokines are increased and may exert effects on both inflammatory and remodeling events in idiopathic pulmonary pneumonia (IIP). Accordingly, we examined the concomitant expression of inflammatory CC chemotactic cytokines or chemokines and their corresponding receptors in surgical lung biopsies obtained at the time of disease diagnosis and pulmonary fibroblasts grown from these biopsies. By gene array analysis, upper and lower lobe biopsies and primary fibroblast lines from patients with usual interstitial pneumonia (UIP), nonspecific interstitial pneumonia, and respiratory bronchiolitis-interstitial lung disease, but not patients without IIP, exhibited CCL7 gene expression. TAQMAN, immunohistochemical, and ELISA analyses confirmed that CCL7 was expressed at significantly higher levels in UIP lung biopsies compared with biopsies from patients with nonspecific interstitial pneumonia, respiratory bronchiolitis-interstitial lung disease, and from patients without IIP. Higher levels of CCL7 were present in cultures of IIP fibroblasts compared with non-IIP fibroblasts, and CCL5, a CCR5 agonist, significantly increased the synthesis of CCL7 by UIP fibroblasts. Together, these data suggest that CCL7 is highly expressed in biopsies and pulmonary fibroblast lines obtained from patients with UIP relative to patients with other IIP and patients without IIP, and that this CC chemokine may have a major role in the progression of fibrosis in this IIP patient group.
Prognostic Value of Desaturation during a 6-Minute Walk Test in Idiopathic Interstitial Pneumonia
Lama, Vibha N. , Flaherty, Kevin R. , Toews, Galen B., Colby, Thomas V. , Long, Qi , Murray, Susan , Kazerooni, Ella A. , Gross, Barry H., Lynch, Joseph P., Long, Qi , Travis, William D. , Martínez, Fernando J. , Long, Qi

American Journal of Respiratory and Critical Care Medicine | August 18, 2003 | Volume: 168 | Issue: 9 | Pages: 1084-1090

10.1164/rccm.200302-219oc | PMID 12917227 Get It

Abstract Exercise-induced hypoxia is an index of the severity of interstitial lung disease. We hypothesized that desaturation during a 6-minute walk test would predict mortality for patients with usual interstitial pneumonia (n = 83) and nonspecific interstitial pneumonia (n = 22). Consecutive patients with biopsy-proven disease performed a 6-minute walk test between January 1996 and December 2001. Desaturation was defined as a fall in oxygen saturation to 88% or less during the 6-minute walk test. Desaturation was common (44 of 83 usual interstitial pneumonia and 8 of 22 nonspecific interstitial pneumonia; chi square, p = 0.39). Patients with usual interstitial pneumonia or nonspecific interstitial pneumonia who desaturated had a significantly higher mortality than patients who did not desaturate (respective log-rank tests, p = 0.0018, p = 0.0089). In patients with usual interstitial pneumonia, the presence of desaturation was associated with an increased hazard of death (hazard ratio, 4.2; 95% confidence interval, 1.40, 12.56; p = 0.01) after adjusting for age, sex, smoking, baseline diffusion capacity for carbon monoxide, FVC, and resting saturation. We conclude that knowledge of desaturation during a 6-minute walk test adds prognostic information for patients with usual interstitial pneumonia and nonspecific interstitial pneumonia.
Prognostic Implications of Physiologic and Radiographic Changes in Idiopathic Interstitial Pneumonia
Flaherty, Kevin R. , Mumford, Jeanette A. , Murray, Susan , Kazerooni, Ella A. , Gross, Barry H., Colby, Thomas V. , Flint, Andrew , Toews, Galen B., Lynch, Joseph P., Travis, William D. , Martínez, Fernando J.

American Journal of Respiratory and Critical Care Medicine | June 3, 2003 | Volume: 168 | Issue: 5 | Pages: 543-548

10.1164/rccm.200209-1112oc | PMID 12773329 Get It

Abstract Idiopathic interstitial pneumonias are a diverse group of lung diseases with varied prognoses. We hypothesized that changes in physiologic and radiographic parameters would predict survival. We retrospectively examined 80 patients with usual interstitial pneumonia and 29 patients with nonspecific interstitial pneumonia. Baseline characteristics were examined together with 6-month change in forced vital capacity, diffusing capacity for carbon monoxide, and ground glass infiltrate and fibrosis on high resolution computed tomography. Patients with usual interstitial pneumonia were more likely to have a statistically significant or marginally significant decline in lung volume, diffusing capacity for carbon monoxide, and an increase in ground glass infiltrates (p ⩽ 0.08) compared with patients with nonspecific interstitial pneumonia. For patients with usual interstitial pneumonia, change in forced vital capacity was the best physiologic predictor of mortality (p = 0.05). In a multivariate Cox proportional hazards model controlling for histopathologic diagnosis, gender, smoking history, baseline forced vital capacity, and 6-month change in forced vital capacity, a decrease in forced vital capacity remained an independent risk factor for mortality (decrease &gt; 10%; hazard ratio 2.47; 95% confidence interval 1.29, 4.73; p = 0.006). We conclude that a 6-month change in forced vital capacity gives additional prognostic information to baseline features for patients with idiopathic interstitial pneumonia.
Fibroblastic Foci in Usual Interstitial Pneumonia: Idiopathic versus Collagen Vascular Disease
Flaherty, Kevin R. , Colby, Thomas V. , Toews, Galen B., Mumford, Jeanette A. , Murray, Susan , Kazerooni, Ella A. , Gross, Barry H., Lynch, Joseph P., Travis, William D. , Thannickal, Victor J. , Martínez, Fernando J.

American Journal of Respiratory and Critical Care Medicine | May 8, 2003 | Volume: 167 | Issue: 10 | Pages: 1410-1415

10.1164/rccm.200204-373oc | PMID 12615630 Get It

Abstract A histologic feature of usual interstitial pneumonia is the presence of fibroblastic foci. As some patients with usual interstitial pneumonia and an underlying collagen vascular disease have a better prognosis, we hypothesized that they would have fewer fibroblastic foci. Pathologists reviewed surgical lung biopsies from 108 patients with usual interstitial pneumonia (nine with collagen vascular disease) and assigned a score (absent 0, mild 1, moderate 2, and marked 3) for fibroblastic foci. Patients with idiopathic usual interstitial pneumonia had a higher median profusion of fibroblastic foci (1.75 vs. 1.0, p = 0.003). Baseline characteristics were similar, although patients with a collagen vascular disease were younger, had a shorter duration of symptoms, and had a higher percentage of predicted total lung capacity. Profusion of fibroblastic foci was the most discriminative feature for separating idiopathic from collagen vascular disease–associated usual interstitial pneumonia (odds ratio 8.31; 95% confidence interval, 1.98, 59.42; p = 0.002 for a one-unit increase in fibroblastic foci score). No deaths were noted in the collagen vascular disease–associated usual interstitial pneumonia group; 52 deaths occurred in the idiopathic usual interstitial pneumonia group (log rank; p = 0.005). We conclude that patients with collagen vascular disease–associated usual interstitial pneumonia have fewer fibroblastic foci and improved survival.
Results of Prevention of REStenosis with Tranilast and its Outcomes (PRESTO) Trial
Holmes, David R. , Lablanche, J M, Grip, Lars, Serruys, P. W., Fitzgerald, Peter J., Goldberg, Sheldon, Brinker, Jeffrey, Zeiher, Andreas M. , Shapiro, Leonard M., Willerson, James T., Davis, Barry R. , Ferguson, James J., Popma, Jeffrey J. , King, Spencer B., Tcheng, James E. , Chan, Robert , Granett, Jeffrey R., Poland, Marcia, Savage, Michael P. , Fischman, David L. , Lincoff, A. Michael

Circulation | September 3, 2002 | Volume: 106 | Issue: 10 | Pages: 1243-1250

10.1161/01.cir.0000028335.31300.da | PMID 12208800 Get It

Background— Restenosis after percutaneous coronary intervention (PCI) is a major problem affecting 15% to 30% of patients after stent placement. No oral agent has shown a beneficial effect on restenosis or on associated major adverse cardiovascular events. In limited trials, the oral agent tranilast has been shown to decrease the frequency of angiographic restenosis after PCI. Methods and Results— In this double-blind, randomized, placebo-controlled trial of tranilast (300 and 450 mg BID for 1 or 3 months), 11 484 patients were enrolled. Enrollment and drug were initiated within 4 hours after successful PCI of at least 1 vessel. The primary end point was the first occurrence of death, myocardial infarction, or ischemia-driven target vessel revascularization within 9 months and was 15.8% in the placebo group and 15.5% to 16.1% in the tranilast groups ( P =0.77 to 0.81). Myocardial infarction was the only component of major adverse cardiovascular events to show some evidence of a reduction with tranilast (450 mg BID for 3 months): 1.1% versus 1.8% with placebo ( P =0.061 for intent-to-treat population). The primary reason for not completing treatment was ≥1 hepatic laboratory test abnormality (11.4% versus 0.2% with placebo, P <0.01). In the angiographic substudy composed of 2018 patients, minimal lumen diameter (MLD) was measured by quantitative coronary angiography. At follow-up, MLD was 1.76±0.77 mm in the placebo group, which was not different from MLD in the tranilast groups (1.72 to 1.78±0.76 to 80 mm, P =0.49 to 0.89). In a subset of these patients (n=1107), intravascular ultrasound was performed at follow-up. Plaque volume was not different between the placebo and tranilast groups (39.3 versus 37.5 to 46.1 mm 3 , respectively; P =0.16 to 0.72). Conclusions— Tranilast does not improve the quantitative measures of restenosis (angiographic and intravascular ultrasound) or its clinical sequelae.