Introduction: Liver transplantation (LT) provides significant survival benefits to patients with unresectable HCC. In the United States, organ allocation policies for HCCs within the United Network for Organ Sharing criteria do not prioritize patients based on their differences in oncological characteristics. This study assessed whether transplant-associated survival benefits (TASBs) vary among patients with different tumor burden scores (TBS) measured at the time of listing. Methods: We analyzed data from adults applying for HCC MELD exception points between 2002 and 2019, with follow-up until December 2023, using the Scientific Registry of Transplant Recipients. TBS was determined based on the largest tumor diameter and number of HCCs. Patients were categorized into low (≤3), intermediate (3.1–5), and high (>5) TBS groups. TASB was measured as the difference in 5-year survival with and without LT. Results: This study included 36,634 LT candidates. High-TBS patients had higher waitlist dropout rates and marginally lower post-transplant survival, resulting in a significantly greater TASB. The 5-year TASB for the low, intermediate, and high TBS groups were 15.7, 22.1, and 25.0 months, respectively. The adjusted survival benefit expressed in 5-year survival differences was 21.9%, 34.5%, and 39.4% in the low, intermediate, and high TBS groups, respectively ( p <0.001). Conclusions: Higher TBS during listing correlates with greater LT benefits for patients with unresectable HCC within UNOS criteria. We conclude that organ allocation policies in the United States should prioritize patients with high TBS due to their increased risk of dropout and comparable post-transplant survival when compared to patients with less advanced tumors.
Behavioral and Physiological Responses of Therapy Dogs to Animal-Assisted Treatment in an Inpatient Stroke Rehabilitation Program
Therapy dogs have been increasingly incorporated into a variety of medical treatment programs to improve patients’ treatment outcomes and wellbeing. However, research investigating the stress level of therapy dogs in this setting is limited. This is the first randomized–controlled and prospective study that investigated the wellbeing of therapy dogs in an inpatient stroke rehabilitation program. In this study, 14 therapy dog–handler pairs were embedded in an inpatient stroke rehabilitation program to provide animal-assisted treatment (AAT). These therapy dog–handler pairs actively participated in stroke rehabilitation by walking with the patient, playing fetch with the patient, and being petted/brushed by the patient, amongst various other AAT activities. To measure canine stress responses during the rehabilitation sessions, salivary cortisol and oxytocin concentrations, heart rate and heart rate variability, tympanic membrane temperature, and a behavioral evaluation were recorded before and after interactions with the patient. The results demonstrated that therapy dogs had significantly decreased heart rate and increased heart rate variability after the AAT session. Right tympanic temperature significantly increased after the session, but there was no significant difference in terms of salivary cortisol or oxytocin levels, nor in stress-related behavioral evaluations after the AAT session. Taken together, the results suggest that incorporating AAT into an inpatient stroke rehabilitation program did not induce stress in the therapy dogs, and that the therapy dogs may have been more relaxed after the session.
T Cell Development and Responses in Human Immune System Mice
Human Immune System (HIS) mice constructed with mature human immune cells or with human hematopoietic stem cells and thymic tissue have provided an important tool for human immunological research. In this article, we first review the different types of HIS mice based on human tissues transplanted and sources of the tissues. We then focus on knowledge of human T cell development and responses obtained using HIS mouse models. These areas include the development of human T cell subsets, with a focus on αβ conventional T cells and regulatory T cells, and human T cell responses in the settings of infection, transplantation rejection and tolerance, autoimmune disease, cancer immunotherapy, and regulatory T cell therapy. We also discuss the limitations and potential future applications of HIS mouse models.
Consensus Recommendations for Studies of Outflow Facility and Intraocular Pressure Regulation Using Ex Vivo Perfusion Approaches
Influence of Humeral Component Cement and Bone Grafting on Greater Tuberosity Healing and Functional Outcomes After Reverse Shoulder Arthroplasty for Proximal Humerus Fractures
Background: Reverse shoulder arthroplasty (RSA) is increasingly used in the treatment of displaced proximal humerus fractures (PHFs) with reliable clinical improvement. However, the preferred techniques for humeral stem fixation are varied and may be influenced by patient and injury characteristics, including bone quality and fracture pattern. This systematic review and meta-analysis sought to determine the effect of humeral component cementing and bone grafting on tuberosity healing rates and functional outcomes after RSA for PHFs. Methods: A systematic review was performed per Preferred Reporting Items for Systematic Reviews and Meta-Analyses guidelines. PubMed/MEDLINE, EMBASE, Web of Science, and Cochrane were queried for clinical studies on RSA performed for PHFs that reported on the use of cemented humeral stems and autograft bone. The primary outcome was the rate of greater tuberosity healing between the various techniques. Secondarily, the authors compared clinical outcomes including postoperative external rotation, forward elevation, abduction, Constant score, and the incidence of complications and revision surgery. Outcomes were compared based on the use of an uncemented press-fit stem, a fully cemented stem without bone graft, or a partially cemented stem with humeral head autograft (i.e., black and tan technique). Results: Forty-eight studies reporting on 1,797 RSAs were included (mean patient age, 75 years; follow-up, 34 months; 81% female). Tuberosity healing was highest in the uncemented cohort, then the black and tan cohort, and lowest in the cemented cohort (80% vs. 70% vs. 61%, p = 0.006). No significant differences in postoperative range of motion, Constant score, complication rates, or revision rates were found. Conclusion: Uncemented fixation with a press-fit stem was associated with superior greater tuberosity healing rates; however, functional outcomes and complications did not differ among techniques. Level of Evidence: Therapeutic Level IV . See Instructions for Authors for a complete description of levels of evidence.
Durability of Complete Responses in Patients from the ECHELON-3 Study
Introduction Relapsed/refractory (R/R) diffuse large B-cell lymphoma (DLBCL) is very aggressive, with a historically low complete response (CR) rate (Blood. 2017; 130[16]:1800-1808). Recent research has focused on achieving complete and durable responses in this population, which translate to improvements in overall survival (OS) and progression-free survival (PFS). Results from the randomized, global, phase 3 ECHELON-3 study (NCT04404283) demonstrated a statistically significant and clinically meaningful improvement in OS, PFS, and objective response rate with brentuximab vedotin (BV) combined with lenalidomide (Len) and rituximab (R; BV+Len+R) vs placebo+Len+R in patients (pts) with R/R DLBCL after ≥2 prior systemic therapies. Here, we present subgroup analyses in pts with a best overall response (BOR) of CR (n=67). Methods Pts in the study were randomized (1:1) to receive BV (1.2 mg/kg) or placebo every 3 weeks, in combination with R (375 mg/m2) and Len (20 mg) once daily. In these subgroup analyses, eligible pts had a BOR of CR and some ended study treatment and received any subsequent anticancer therapy. BOR was assessed by investigators according to the Lugano 2014 classification. Duration of response was defined as the time from the start of the first documented CR to the first documented tumor progression per Lugano 2014 or death. Pts who initiated a subsequent nonpalliative anticancer therapy were censored at the most recent prior response assessment. Subsequent nonpalliative anticancer therapies were defined as any systemic therapy received after the end of study treatment. P values are descriptive. Results Of the 112 pts in the BV+Len+R group, 45 (40.2%) had a BOR of CR. Of the 118 pts in the placebo+Len+R group, 22 (18.6%) had a BOR of CR. The median duration of CR was 18.9 months (95% CI, 11.1 months-not estimable [NE]) with BV+Len+R vs not reached (NR) with placebo+Len+R (hazard ratio [HR], 0.527; 95% CI, 0.200-1.389; P=.1891). The median time to CR was 1.58 months (range, 1.2-7.3 months) with BV+Len+R and 1.61 months (range, 0.7-4.6 months) with placebo+Len+R. With a median follow-up of 14.3 months, the median OS in pts with a BOR of CR was 31.5 months (95% CI, 20.3 months-NE) in the BV+Len+R group vs NR in the placebo+Len+R group (HR, 1.044; 95% CI, 0.331-3.298; P=.9407). Median PFS in pts with a BOR of CR was 21.5 months (95% CI, 12.6 months-NE) in the BV+Len+R group vs NR (95% CI, 5.4 months-NE) in the placebo+Len+R group (HR, 0.6333; 95% CI, 0.256-1.567; P=.3198). Results of NR in the placebo+Len+R group are likely attributable to limited follow-up and small sample size. Additional data on baseline characteristics of pts who had CR will be presented. Of the 45 pts with CR in the BV+Len+R group, 42 (93.3%) received no subsequent anticancer therapy. Of the 22 pts with CR in the placebo+Len+R group, 17 (77.3%) received no subsequent anticancer therapy. Conclusions BV doubled the CR rate in pts with R/R DLBCL compared with placebo, and outcomes in pts with CR were durable, with only 6.7% of pts treated with BV+Len+R receiving subsequent systemic anticancer therapy, compared with 22.7% of pts treated with placebo+Len+R receiving subsequent therapy. Overall, BV+Len+R demonstrated a survival benefit in the ECHELON-3 study and is a promising option to achieve complete and durable responses in third- or later-line therapy for pts with R/R DLBCL.
Cross-Cohort Correlative Analysis of Clinically High-Risk Patients (pts) Treated with Idecabtagene Vicleucel (ide-cel) in KarMMa-2: Association between Progression-Free Survival (PFS) and Tumor Burden and Immune Status at Apheresis
Introduction Despite improvements in outcomes with triplet and quadruplet combination regimens in front-line (1L) multiple myeloma (MM) treatment (Tx), pts with disease that relapses early after 1L Tx or responds inadequately to 1L autologous stem cell transplantation (ASCT) have poor prognosis. Therefore, Txs with novel mechanisms of action are needed. Ide-cel, a BCMA-directed CAR T cell therapy, resulted in deep and durable responses in pts with functional high-risk MM. KarMMa-2 (NCT03601078) is a phase 2, multicenter, multicohort trial of ide-cel: cohort 2a includes pts who progressed ≤ 18 mo of starting 1L therapy with ASCT, cohort 2b includes pts who progressed ≤ 18 mo of starting 1L therapy without ASCT, and cohort 2c includes pts who achieved less than very good partial response ~100 d after 1L ASCT. With a median follow-up of 21.5, 30.1, and 39.4 mo, respectively, median PFS (95% CI) for cohorts 2a, 2b, and 2c was 11.4 mo (5.6-19.6), not reached (NR; 12.2-NR), and NR (38.0-NR). Previous correlative analyses of ide-cel in relapsed and refractory MM have shown that pts with lower pre-Tx tumor burden and lower pre-Tx indicators of basal inflammation had better responses. This cross-cohort analysis evaluated tumor burden, baseline inflammatory status, and T-cell quality differences to develop hypotheses for biologic features underpinning robust PFS previously observed with ide-cel. Methods Levels of soluble BCMA (sBCMA) and 25 exploratory cytokines at infusion and post-Tx were measured by immunoassay. Apheresis and drug product material were characterized by high-parameter flow cytometry and immunoassay. Pharmacokinetics (PK) were evaluated by droplet digital polymerase chain reaction. These analyses were exploratory and post hoc in nature; statistical tests were utilized to identify relationships of interest to develop working hypotheses of the underlying biology. Results Baseline tumor burden, evaluated by median sBCMA (interquartile range [IQR]), was highest in cohort 2b at 156 ng/mL (83-300) compared with 2a at 91 ng/mL (41-169) and 2c at 27 ng/mL (19-48). Pts in cohort 2b had the lowest baseline levels of a subset of inflammatory cytokines, including interferon [IFN]-γ and interleukin-4. Phenotypic data from apheresis material showed that, among the 3 cohorts, pts in cohort 2b also had the lowest amount of effector memory T cells positive for CD45RA (TEMRA; terminally differentiated T cells) and CD57+ T cells (senescent T cells), and the highest amount of CCR7+CD27+ T cells (early memory T cells). Cohorts 2a and 2c had similar phenotypic profiles in the apheresis material. Median time from ASCT to infusion (IQR) was 12.1 mo (9.7-14.3) in cohort 2a and 5.8 mo (5.2-6.2) in cohort 2c. Pts in cohort 2b also had a higher CD4:CD8 ratio in the apheresis material vs the other 2 cohorts. Profiling the drug products from pts in cohort 2b showed higher CAR+ T cell frequency and CAR-specific IFN-γ, and tumor necrosis factor-α and granzyme secretion upon stimulation vs 2a and 2c, with a consistent and comparable potency profile among all cohorts. While sBCMA level at infusion was lower in cohort 2c vs 2a, the similarity in inflammatory state and T-cell quality may reflect impacts from recent melphalan use before ASCT and bone marrow recovery after ASCT, as most pts in both cohorts were < 18 mo from ASCT. Robust cell expansion was observed across cohorts. Conclusions The encouraging median PFS outcome previously observed in cohort 2b relative to existing therapies in this high-risk pt population may be driven by the higher T-cell quality and better inflammatory state pre-Tx despite high baseline tumor burden (sBCMA). Pts in cohorts 2c and 2a had comparatively less optimal baseline immune status vs cohort 2b. The promising PFS observed in cohort 2c may be reflective of sufficient T-cell quality to drive optimal responses in the context of relatively low tumor burden at study entry. The median PFS in cohort 2a may reflect the combination of high tumor burden and less optimal baseline inflammatory status. These observations suggest a working model in which ide-cel may demonstrate robust PFS in pts with early-line, high-risk MM and high tumor burden with good baseline immune status and T-cell quality, and in pts with less favorable baseline immune status and T-cell quality when tumor burden is relatively low and stable.
The Fusion Landscape of Anaplastic Large Cell Lymphoma: An L.L.M.P.P. Study
Background: Anaplastic large cell lymphomas (ALCLs) represent a heterogeneous group of T-cell lymphomas that currently are classified by the presence or absence of ALK tyrosine kinase (TK) fusion genes (ALK+ or ALK−) and clinical presentation (systemic, cutaneous, or breast implant-associated). Two overarching molecular types of ALCL recently were discovered, defined by the presence (Type I) or absence (Type II) of a gene expression signature highly enriched for JAK-STAT3 activation. Fusions involving non-ALK TK genes occur in some ALK− cases, but the fusion landscape of ALCL remains incompletely characterized. Methods: Expert consensus pathology review was conducted in the Lymphoma/Leukemia Molecular Profiling Project (LLMPP). RNAseq was performed and fusions were identified using FusionCatcher. Here, we focused on recurrent in-frame coding fusions. Previously unreported fusions were validated by RT-PCR. Type I/II was assigned using a previously validated gene expression-based model. Genes with adjusted (adj) P<0.05 were considered differentially expressed. Overall survival (OS) was assessed for systemic ALCL, when available. Results: We evaluated 379 ALCLs (229M/150F; mean age, 56 y). Of 199 candidate fusions (excluding reciprocal events), 28 were recurrent and passed quality metrics. At least 1 of these 28 fusions was present in 150 cases (40%). ALK fusions were present in 106 ALK+ ALCLs (all Type I; P<0.0001). Of these, NPM1::ALK was seen in 68/106 (64%). Alternate partners (X::ALK) included ATIC (N=24) and CTLC, COL1A2, MSN, MYH9, RNF213, SATB1, TFH, TPM3, and TRAF1 (1-3 cases each). X::ALK was associated with older age (mean, 52 y) than NPM1::ALK (32 y; P<0.0001) and showed relative overexpression of 49 genes, including multiple activators of small GTPases such as CGNL1 (FC, 5.6; Padj=2.4×10-6), SRGAP1, ALS2, DOCK1, and NCKAP1. ALK expression was similar in cases with NPM1::ALK and X::ALK and there was no significant difference in OS. Non-ALK TK fusions were seen in 17/273 ALK− cases (6%), including TYK2 (N=9); JAK2 (N=6); and ROS1 (N=2). All were Type I ALCLs (P<0.0001). ALK− cases with non-ALK TK fusions overexpressed 38 genes compared to ALK− cases without TK fusions, including cytokines involved in the IL17 signaling pathway such as CXCL6 (FC, 12.5; Padj=4.2×10-3), CXCL1, and CSF3. We then assessed the relationship between ALK− cases with non-ALK TK fusions and ALK+ cases by separately comparing each subset to ALK− cases without TK fusions. FC values for ALK− cases with non-ALK TK fusions were significantly correlated with FC values for ALK+ ALCLs over the set of expressed genes (R=0.54; P<0.0001). At a median follow-up of 32 months, 0/4 systemic ALCL patients with non-ALK TK fusions had died, while 30% of those with ALK− ALCL without TK fusions had died, but this was not statistically significant (P=0.26). The other 13 ALK− cases with non-ALK TK fusions were either localized ALCLs or did not have outcome data available. Of 20 TP63 fusions, 17 (85%) were TBL1XR1::TP63 and 3 were X::TP63. As previously reported, TP63 fusions were associated with poor OS (median OS, 10 months; not reached for other ALK− ALCLs; P=0.007). Four ALCLs had a novel NCL::UBTF fusion involving genes encoding the nucleolar proteins nucleolin and nucleolar (upstream binding) transcription factor-1. Four cases each had PARG::BMS1 and TNK1::GPS2 (the latter seen only in Type I ALCLs). Conclusions: This large consortium-based analysis of coding fusions further elucidates the molecular distinction between Type I and Type II ALCLs. Both ALK and non-ALK TK fusions were seen exclusively in Type I ALCLs, which we have shown previously are enriched for JAK-STAT3 pathway genes and correlate strongly with pSTAT3Y705 positivity by immunohistochemistry. These fusions were not identified in Type II ALCLs, which previous data suggest are associated with epigenetic alterations. ALK+ ALCLs with NPM1::ALK and X::ALK showed differences in gene expression, suggesting biological differences. Furthermore, ALCLs with non-ALK TK fusions shared gene expression features with ALK+ ALCL. Clinical fusion detection could enhance molecular classification of Type I and Type II ALCLs and may guide precision therapy.
ProtPipe: A Multifunctional Data Analysis Pipeline for Proteomics and Peptidomics
Abstract Mass spectrometry (MS) is a technique widely employed for the identification and characterization of proteins, with personalized medicine, systems biology, and biomedical applications. The application of MS-based proteomics advances our understanding of protein function, cellular signaling, and complex biological systems. MS data analysis is a critical process that includes identifying and quantifying proteins and peptides and then exploring their biological functions in downstream analyses. To address the complexities associated with MS data analysis, we developed ProtPipe to streamline and automate the processing and analysis of high-throughput proteomics and peptidomics datasets with DIA-NN preinstalled. The pipeline facilitates data quality control, sample filtering, and normalization, ensuring robust and reliable downstream analyses. ProtPipe provides downstream analyses, including protein and peptide differential abundance identification, pathway enrichment analysis, protein–protein interaction analysis, and major histocompatibility complex (MHC)–peptide binding affinity analysis. ProtPipe generates annotated tables and visualizations by performing statistical post-processing and calculating fold changes between predefined pairwise conditions in an experimental design. It is an open-source, well-documented tool available at https://github.com/NIH-CARD/ProtPipe, with a user-friendly web interface.
Abstract 4141974: Impact of Timing of Pacemaker Reimplantation Following Transvenous Lead Removal of Infected Cardiac Implantable Electronic Devices on Hospital Outcomes
Background: The optimal timing of pacemaker reimplantation following transvenous lead removal (TLR) of infected cardiac implantable electronic device (CIED) remains unclear. Objective: Our study aimed to assess the impact of timing to pacemaker reimplantation after TLR of infected CIED on hospital outcomes. Method: Using the Nationwide Readmissions Database, patients aged ≥18 years who underwent new pacemaker implantation with percutaneous approach following TLR of infected CIED from 2017 to 2020 were identified. The study population was stratified based on the timing of pacemaker reimplantation following TLR of infected CIED: early (<5 days) vs delayed (≥5 days). Weighted-propensity-score matched conditional multivariable logistic regressions were performed to determine the impact of the timing on various outcomes. Results: In our study, 469 (66.9%) patients received early device reimplantation, and 232 (33.1%) patients received delayed device reimplantation (≥5 days). Post-procedurally, patients in the delayed group had a higher risk of prolonged hospital stay (95% CI OR: 42.37 (6.36 – 282.11); p<0.01) and non-home discharge (95% CI OR: 2.00 (1.35 – 2.95), p<0.01). There was no significant difference between both groups in the early mortality, 30-day readmission, and procedural complications. Conclusion: Our study suggests that time-to-device reimplantation from TLR of infected CIED did not affect the overall short-term in-hospital outcomes. However, delayed device reimplantation was associated with a higher rate of prolonged hospital stay and non-home discharge.