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Wiepert, Daniela A.

https://orcid.org/0000-0002-6076-1712

Mayo Clinic

Mayo Clinic

Citations 6

Automatic Speech Recognition in Primary Progressive Apraxia of Speech
Wiepert, Daniela A. , Botha, Hugo , Duffy, Joseph R. , Clark, Heather M. , Whitwell, Jennifer L. , Josephs, Keith A. , Utianski, Rene L. , Tetzloff, Katerina A. , Wiepert, Daniela, Botha, Hugo , Duffy, Joseph R , Clark, Heather M , Whitwell, Jennifer L , Josephs, Keith A , Utianski, Rene L , Whitwell, Jennifer L.

Journal of Speech, Language, and Hearing Research | August 6, 2024 | Volume: 67 | Issue: 9 | Pages: 2964-2976

10.1044/2024_jslhr-24-00049 Get It

Introduction: Transcribing disordered speech can be useful when diagnosing motor speech disorders such as primary progressive apraxia of speech (PPAOS), who have sound additions, deletions, and substitutions, or distortions and/or slow, segmented speech. Since transcribing speech can be a laborious process and requires an experienced listener, using automatic speech recognition (ASR) systems for diagnosis and treatment monitoring is appealing. This study evaluated the efficacy of a readily available ASR system (wav2vec 2.0) in transcribing speech of PPAOS patients to determine if the word error rate (WER) output by the ASR can differentiate between healthy speech and PPAOS and/or among its subtypes, whether WER correlates with AOS severity, and how the ASR's errors compare to those noted in manual transcriptions. Method: Forty-five patients with PPAOS and 22 healthy controls were recorded repeating 13 words, 3 times each, which were transcribed manually and using wav2vec 2.0. The WER and phonetic and prosodic speech errors were compared between groups, and ASR results were compared against manual transcriptions. Results: Mean overall WER was 0.88 for patients and 0.33 for controls. WER significantly correlated with AOS severity and accurately distinguished between patients and controls but not between AOS subtypes. The phonetic and prosodic errors from the ASR transcriptions were also unable to distinguish between subtypes, whereas errors calculated from human transcriptions were. There was poor agreement in the number of phonetic and prosodic errors between the ASR and human transcriptions. Conclusions: This study demonstrates that ASR can be useful in differentiating healthy from disordered speech and evaluating PPAOS severity but does not distinguish PPAOS subtypes. ASR transcriptions showed weak agreement with human transcriptions; thus, ASR may be a useful tool for the transcription of speech in PPAOS, but the research questions posed must be carefully considered within the context of its limitations. Supplemental Material: https://doi.org/10.23641/asha.26359417
Detecting Speech Abnormalities With a Perceiver-Based Sequence Classifier that Leverages a Universal Speech Model
Soltau, Hagen, Shafran, Izhak, Ottenwess, Alex, Barnard, Leland R , Stricker, John L. , Wiepert, Daniela A. , Duffy, Joseph R. , Utianski, Rene L. , Jones, David T. , Botha, Hugo

2023 IEEE Automatic Speech Recognition and Understanding Workshop (ASRU) | January 19, 2024 | Volume: No volume available | Issue: No issue available | Pages: 1-7

10.1109/asru57964.2023.10389789 Get It

Not All Errors Are Created Equal: Evaluating The Impact of Model and Speaker Factors on ASR Outcomes in Clinical Populations
Wiepert, Daniela A. , Stricker, John L. , Barnard, Leland R , Josephs, Keith A. , Whitwell, Jennifer L. , Utianski, Rene L. , Duffy, Joseph R. , Jones, David T. , Botha, Hugo

2023 IEEE Automatic Speech Recognition and Understanding Workshop (ASRU) | January 19, 2024 | Volume: No volume available | Issue: No issue available | Pages: 1-6

10.1109/asru57964.2023.10389723 Get It

Default mode network failure and neurodegeneration across aging and amnestic and dysexecutive Alzheimer’s disease
Corriveau‐Lecavalier, Nick , Gunter, Jeffrey L. , Kamykowski, Michael G. , Dicks, Ellen , Botha, Hugo , Kremers, Walter K. , Graff‐Radford, Jonathan , Wiepert, Daniela A. , Schwarz, Christopher G. , Yacoub, Essa , Knopman, David S. , Boeve, Bradley F. , Uǧurbil, Kǎmil , Petersen, Ronald C. , Jack, Clifford R. , Terpstra, Melissa , Jones, David T. , Knopman, David S. , Kamykowski, Michael, Jack, Clifford R , Schwarz, Christopher G , Boeve, Brad , Botha, Hugo , Jones, David T , Corriveau-Lecavalier, Nick , Kremers, Walter K

Brain Communications | March 8, 2023 | Volume: 5 | Issue: 2 | Pages: No page available

10.1093/braincomms/fcad058 Get It

AbstractFrom a complex systems perspective, clinical syndromes emerging from neurodegenerative diseases are thought to result from multiscale interactions between aggregates of misfolded proteins and the disequilibrium of large-scale networks coordinating functional operations underpinning cognitive phenomena. Across all syndromic presentations of Alzheimer’s disease, age-related disruption of the default mode network is accelerated by amyloid deposition. Conversely, syndromic variability may reflect selective neurodegeneration of modular networks supporting specific cognitive abilities. In this study, we leveraged the breadth of the Human Connectome Project-Aging cohort of non-demented individuals (N = 724) as a normative cohort to assess the robustness of a biomarker of default mode network dysfunction in Alzheimer’s disease, the network failure quotient, across the aging spectrum. We then examined the capacity of the network failure quotient and focal markers of neurodegeneration to discriminate patients with amnestic (N = 8) or dysexecutive (N = 10) Alzheimer’s disease from the normative cohort at the patient level, as well as between Alzheimer’s disease phenotypes. Importantly, all participants and patients were scanned using the Human Connectome Project-Aging protocol, allowing for the acquisition of high-resolution structural imaging and longer resting-state connectivity acquisition time. Using a regression framework, we found that the network failure quotient related to age, global and focal cortical thickness, hippocampal volume, and cognition in the normative Human Connectome Project-Aging cohort, replicating previous results from the Mayo Clinic Study of Aging that used a different scanning protocol. Then, we used quantile curves and group-wise comparisons to show that the network failure quotient commonly distinguished both dysexecutive and amnestic Alzheimer’s disease patients from the normative cohort. In contrast, focal neurodegeneration markers were more phenotype-specific, where the neurodegeneration of parieto-frontal areas associated with dysexecutive Alzheimer’s disease, while the neurodegeneration of hippocampal and temporal areas associated with amnestic Alzheimer’s disease. Capitalizing on a large normative cohort and optimized imaging acquisition protocols, we highlight a biomarker of default mode network failure reflecting shared system-level pathophysiological mechanisms across aging and dysexecutive and amnestic Alzheimer’s disease and biomarkers of focal neurodegeneration reflecting distinct pathognomonic processes across the amnestic and dysexecutive Alzheimer’s disease phenotypes. These findings provide evidence that variability in inter-individual cognitive impairment in Alzheimer’s disease may relate to both modular network degeneration and default mode network disruption. These results provide important information to advance complex systems approaches to cognitive aging and degeneration, expand the armamentarium of biomarkers available to aid diagnosis, monitor progression and inform clinical trials.
A global functional network biomarker across aging and dysexecutive Alzheimer’s disease
Gunter, Jeffrey L. , Kamykowski, Michael G. , Radford, Jonathan Graff, Wiepert, Daniela A. , Yacoub, Essa , Uǧurbil, Kǎmil , Petersen, Ronald C. , Terpstra, Melissa , Corriveau‐Lecavalier, Nick , Botha, Hugo , Schwarz, Christopher G. , Knopman, David S. , Boeve, Bradley F. , Jack, Clifford R. , Jones, David T.

Alzheimer's & Dementia | December 20, 2022 | Volume: 18 | Issue: S5 | Pages: No page available

10.1002/alz.061957 Get It

AbstractBackgroundDisruption of the default mode network (DMN) is thought to be a common feature of aging and across Alzheimer’s disease (AD) clinical phenotypes, while syndromic variability could be reflected in selective degeneration of macro‐scale networks optimally supporting specific mental abilities (Fig 1). As part of a collaborative effort between Mayo Clinic and the Human Connectome Project‐Aging (HCP‐A), we aimed to delineate a biomarker of global network failure across aging and the dysexecutive (dAD) and amnestic phenotypes of AD, and biomarkers of focal degeneration specific to each AD phenotype.MethodWe used a regression framework to assess the relationships between a marker of DMN dysfunction, the network failure quotient (NFQ), and factors relevant to AD such as age, cortical thickness (global cortical thickness, inferior parietal lobe), hippocampal volume, and cognition (episodic memory, cognitive flexibility) in the HCP‐A cohort, which consists of 725 non‐demented older adults. We then fit centile curves to the HCP‐A cohort to assess whether the NFQ and focal degeneration markers could distinguish dAD (n=10) and amnestic AD (n=8) patients from the HCP‐A cohort at the group‐ and individual‐level. Participants were scanned using the HCP‐A protocol, allowing for the acquisition of high‐resolution multi‐echo structural images and longer resting‐state connectivity acquisition time compared to traditional protocols.ResultThe NFQ related to age, cortical thickness, hippocampal volume, and cognition in the HCP‐A cohort. It also strongly discriminated dAD and amnestic AD from the HCP‐A cohort but did not discriminate between AD phenotypes. In contrast, markers of focal degeneration were phenotype‐specific; parieto‐frontal areas yielded largest effect sizes for dAD patients, and hippocampal and temporal areas best discriminated patients with amnestic AD (Fig 2).ConclusionThe NFQ may reflect shared system‐level pathophysiological mechanisms across aging and the dysexecutive and amnestic phenotypes of AD whereas focal degeneration markers highlight distinct pathognomonic processes across AD phenotypes. These findings suggest that inter‐individual variability in cognitive impairment in AD would be closely tied to modular, phenotype‐specific network degeneration combined with a common global functional disruption of the DMN. Such information has crucial implications for clinical biomarkers and to provide a deeper understanding of heterogeneity in AD.
A robust biomarker of large‐scale network failure in Alzheimer's disease
Wiepert, Daniela A. , Lowe, Val J. , Graff‐Radford, Jonathan, Petersen, Ronald C. , Jones, David T. , Knopman, David S. , Boeve, Bradley F. , Graff‐Radford, Jonathan , Jack, Clifford R. , Jones, David T

Alzheimer's & Dementia: Diagnosis, Assessment & Disease Monitoring | January 25, 2017 | Volume: 6 | Issue: 1 | Pages: 152-161

10.1016/j.dadm.2017.01.004 Get It

AbstractIntroductionBiomarkers for Alzheimer's disease (AD) pathophysiology have been developed that focus on various levels of brain organization. However, no robust biomarker of large‐scale network failure has been developed. Using the recently introduced cascading network failure model of AD, we developed the network failure quotient (NFQ) as a biomarker of this process.MethodsWe developed and optimized the NFQ using our recently published analyses of task‐free functional magnetic resonance imaging data in clinically normal (n = 43) and AD dementia participants (n = 28) from the Alzheimer's Disease Neuroimaging Initiative. The optimized NFQ (oNFQ) was then validated in a cohort spanning the AD spectrum from the Mayo Clinic (n = 218).ResultsThe oNFQ (d = 1.25, 95% confidence interval [1.25, 1.26]) had the highest effect size for differentiating persons with AD dementia from clinically normal participants. The oNFQ measure performed similarly well on the validation Mayo Clinic sample (d = 1.44, 95% confidence interval [1.43, 1.44]). The oNFQ was also associated with other available key biomarkers in the Mayo cohort.DiscussionThis study demonstrates a measure of functional connectivity, based on a cascading network failure model of AD, and was highly successful in identifying AD dementia. A robust biomarker of the large‐scale effects of AD pathophysiology will allow for richer descriptions of the disease process and its modifiers, but is not currently suitable for discriminating clinical diagnostic categories. The large‐scale network level may be one of the earliest manifestations of AD, making this an attractive target for continued biomarker development to be used in prevention trials.