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Thompson, Whitney S

0009-0000-5148-6379

Mayo Clinic

Center for Individualized Medicine, Mayo Clinic, Rochester, Minnesota.

Citations 8

Monogenic Etiologies of Kidney Cysts in the Pediatric Population
Bozkurt, Elif G. , Najeeb, Mohamad Sheikh, Yang, Hana , Kemppainen, Jennifer L., Smith, Byron H. , Gregory, Adriana , Baker, Tracy A., Thompson, W. Foster, Khalifa, Muhammed, Cruz, Conrad , Kouri, Anne M. , Tran, Cheryl L. , Sas, David J. , Cramer, Carl H. , Kline, Timothy L. , Torres, Vicente, Chebib, Fouad T., Harris, Peter, Thompson, Whitney S. , Baker, Tracy A. , Sheikh Najeeb, Mohamad, Gregory, Adriana V , Baker, Tracy A , Thompson, Whitney S , Dahl, Neera K , Kline, Timothy L , Torres, Vicente E , Chebib, Fouad T , Harris, Peter C , Hanna, Christian , Smith, Byron , Dahl, Neera K. , Chebib, Fouad T. , Harris, Peter C. , Hanna, Christian

Clinical Journal of the American Society of Nephrology | March 6, 2026 | Volume: 21 | Issue: 6 | Pages: 984-996

10.2215/cjn.0000001027 Get It

Key Points In a cohort of children, 79% of families with kidney cysts had a monogenic diagnosis. Resolved cases were more likely to have a family history of kidney cysts and unresolved cases more often had unilateral cysts. Broad genetic testing revealed genetic diversity and informed prognosis and clinical management in childhood kidney cysts. Background Pediatric kidney cysts may indicate an underlying genetic disorder, yet the full spectrum of causes remains incompletely defined. With advances in genetic testing enabling broader evaluation, this study assessed the diagnostic utility of comprehensive genetic testing in a broad pediatric cohort with kidney cysts and characterized the underlying etiological diversity. Methods This observational cohort study included patients younger than 18 years enrolled between January 2020 and June 2024 at a single tertiary center. Genetic testing used targeted multigene or custom curated exome/genome sequencing panels, with segregation analysis when available. Eligible participants had at least two cysts without family history, one cyst with positive family history, or enlarged echogenic kidneys on prenatal ultrasound; those with congenital anomalies of the kidney and urinary tract associated with cysts were excluded. Clinical presentation was categorized as symptomatic, incidental, prenatal, or family screening. Primary outcomes were diagnostic yield and distribution of pathogenic variants. Results Among 109 patients (median age 7.6 years, 53% female), genetic testing identified a definitive diagnosis in 81 of 100 tested patients (81%) from 72 families (79%; 14 disorders). PKD1 variants were most common (45%), while PKD2 accounted for 7%. Other causes included HNF1B or 17q12 deletions (13%), minor autosomal dominant polycystic kidney disease genes (11%; GANAB, NEK8, IFT140 ), monoallelic PKHD1 (3%), and biallelic PKHD1 (8%), while syndromic ciliopathy genes accounted for 5%. A positive family history of cystic kidney disease was more common among patients with a genetic diagnosis (54% versus 11%; P = 0.008). Patients without an identified genetic diagnosis more often had unilateral cysts (26% versus 4%; P = 0.53). Diagnosis by clinical symptoms was the most genetically diverse category. Conclusions Comprehensive genetic testing in pediatric kidney cysts achieved high diagnostic yield in a selected cohort and identified diverse causes beyond major autosomal dominant polycystic kidney disease/autosomal recessive polycystic kidney disease genes, supporting early evaluation to improve diagnostic accuracy, inform prognosis, and guide management, even in the absence of family history.
Assessment of Aminoglycoside-Induced Hearing Loss Risk in the Perinatal Period
Thompson, Whitney S. , Saba, Leslie , Hasadsri, Linda , Girard, Sylvie, Schimmenti, Lisa A. , Bendel‐Stenzel, Ellen , Wick, Myra , Brumbaugh, Jane E. , Schimmenti, Lisa A , Brumbaugh, Jane E , Thompson, Whitney S

American Journal of Perinatology | July 15, 2024 | Volume: 42 | Issue: 01 | Pages: 126-129

10.1055/s-0044-1788335 Get It

Objective This study aimed to determine the prevalence and heteroplasmy level(s) of MT-RNR1 variants m.1555A > G and m.1494C > T, which are associated with aminoglycoside-induced hearing loss, in a general perinatal population. This study also aimed to characterize the association of these variants and their heteroplasmy levels with hearing loss outcomes with and without aminoglycoside exposure. Study Design Droplet digital polymerase chain reaction was performed on 479 maternal DNA samples from a general perinatal biobank at our institution to detect the presence and heteroplasmy levels of MT-RNR1 variants m.1555A > G and m.1494C > T. Testing of paired neonatal specimen(s) was planned for positive maternal tests. A retrospective chart review was performed to characterize the population, identify aminoglycoside exposures, and determine hearing outcomes. Results All maternal samples tested negative for MT-RNR1 variants m.1555A > G and m.1494C > T. Maternal and neonatal subjects had high rates of aminoglycoside exposure (15.9 and 13.9%, respectively). No subjects with sensorineural or mixed hearing loss had documented aminoglycoside exposure. Conclusion This study demonstrated that a larger sample size is needed to establish the prevalence of these variants as no subjects tested positive. Determination of variant prevalence in the neonatal population, association of variant heteroplasmy levels with hearing outcomes, and reliability of maternal testing as a surrogate for neonatal testing are important next steps toward universal prenatal or newborn screening. Key Points
State of the Science and Ethical Considerations for Preimplantation Genetic Testing for Monogenic Cystic Kidney Diseases and Ciliopathies
Thompson, Whitney S. , Babayev, Samir N. , McGowan, Michelle L. , Kattah, Andrea G. , Wick, Myra , Bendel‐Stenzel, Ellen , Chebib, Fouad T. , Harris, Peter C. , Dahl, Neera K. , Hanna, Christian , Wick, Myra J , Bendel-Stenzel, Ellen M , Torres, Vicente E , Hanna, Christian , Harris, Peter C , Babayev, Samir , Dahl, Neera K , Chebib, Fouad T , Thompson, Whitney S , Torres, Vicente E.

Journal of the American Society of Nephrology | October 26, 2023 | Volume: 35 | Issue: 2 | Pages: 235-248

10.1681/asn.0000000000000253 Get It

There is a broad phenotypic spectrum of monogenic polycystic kidney diseases (PKDs). These disorders often involve cilia-related genes and lead to the development of fluid-filled cysts and eventual kidney function decline and failure. Preimplantation genetic testing for monogenic (PGT-M) disorders has moved into the clinical realm. It allows prospective parents to avoid passing on heritable diseases to their children, including monogenic PKD. The PGT-M process involves embryo generation through in vitro fertilization, with subsequent testing of embryos and selective transfer of those that do not harbor the specific disease-causing variant(s). There is a growing body of literature supporting the success of PGT-M for autosomal-dominant and autosomal-recessive PKD, although with important technical limitations in some cases. This technology can be applied to many other types of monogenic PKD and ciliopathies despite the lack of existing reports in the literature. PGT-M for monogenic PKD, like other forms of assisted reproductive technology, raises important ethical questions. When considering PGT-M for kidney diseases, as well as the potential to avoid disease in future generations, there are regulatory and ethical considerations. These include limited government regulation and unstandardized consent processes, potential technical errors, high cost and equity concerns, risks associated with pregnancy for mothers with kidney disease, and the impact on all involved in the process, including the children who were made possible with this technology.
Ultra‐rapid whole genome sequencing: A paradigm shift in the pre‐transplant evaluation of neonatal acute liver failure
Thompson, Whitney S. , Greenmyer, Jacob R. , Lanpher, Brendan C. , Bendel‐Stenzel, Ellen M., Hobbs, Charlotte A. , Ibrahim, Samar H. , Hildreth, Amber , Brumbaugh, Jane E. , Bendel-Stenzel, Ellen M, Ibrahim, Samar H , Hildreth, Amber N , Thompson, Whitney S , Bendel‐Stenzel, Ellen , Dimmock, David

Liver Transplantation | July 21, 2022 | Volume: 29 | Issue: 1 | Pages: 118-121

10.1002/lt.26547 Get It

Neonatal familial hemophagocytic lymphohistiocytosis diagnosed with ultrarapid whole‐genome sequencing
Greenmyer, Jacob R. , Thompson, Whitney S. , Mavis, Stephanie C. , Hassan, Sara , Weckwerth, Jody , Hobbs, Charlotte A. , James, Kiely N. , Nahas, Shareef , Galardy, Paul J. , Collura, Christopher A. , Mavis, Stephanie, Galardy, Paul, Collura, Christopher, Thompson, Whitney S

Pediatric Blood & Cancer | July 7, 2022 | Volume: 70 | Issue: 1 | Pages: No page available

10.1002/pbc.29871 Get It

3q21 deletion affects GATA2 and is associated with myelodysplastic syndrome
Greenmyer, Jacob R. , Thompson, Whitney S. , Hoppman, Nicole L., Khan, Shakila P. , Patnaik, Mrinal S., Schimmenti, Lisa A. , Kohorst, Mira A. , Khan, Shakila, Schimmenti, Lisa A , Thompson, Whitney S , Patnaik, Mrinal S.

British Journal of Haematology | October 17, 2021 | Volume: 196 | Issue: 4 | Pages: 1120-1123

10.1111/bjh.17902 Get It

The future of gene-targeted therapy for hereditary tyrosinemia type 1 as a lead indication among the inborn errors of metabolism
Thompson, Whitney S. , Mondal, Gourish, VanLith, Caitlin J. , Kaiser, Robert A. , Lillegard, Joseph B. , Thompson, Whitney S

Expert Opinion on Orphan Drugs | July 21, 2020 | Volume: 8 | Issue: 7 | Pages: 245-256

10.1080/21678707.2020.1791082 Get It

Personalized Video Feedback and Repeated Task Practice Improve Laparoscopic Knot-Tying Skills: Two Controlled Trials
Abbott, Eduardo , Thompson, Whitney S. , Pandian, T.K. , Farley, David R. , Cook, David A. , Abbott, Eduardo F, Zendejas, Benjamin , Thompson, Whitney S

Academic Medicine | October 25, 2017 | Volume: 92 | Issue: 11S | Pages: S26-S32

10.1097/acm.0000000000001924 Get It

Purpose Compare the effect of personalized feedback (PF) vs. task demonstration (TD), both delivered via video, on laparoscopic knot-tying skills and perceived workload; and evaluate the effect of repeated practice. Method General surgery interns and research fellows completed four repetitions of a simulated laparoscopic knot-tying task at one-month intervals. Midway between repetitions, participants received via e-mail either a TD video (demonstration by an expert) or a PF video (video of their own performance with voiceover from a blinded senior surgeon). Each participant received at least one video per format, with sequence randomly assigned. Outcomes included performance scores and NASA Task Load Index (NASA-TLX) scores. To evaluate the effectiveness of repeated practice, scores from these trainees on a separate delayed retention test were compared against historical controls who did not have scheduled repetitions. Results Twenty-one trainees completed the randomized study. Mean change in performance scores was significantly greater for those receiving PF (difference = 23.1 of 150 [95% confidence interval (CI): 0, 46.2], P = .05). Perceived workload was also significantly reduced (difference = −3.0 of 20 [95% CI: −5.8, −0.3], P = .04). Compared with historical controls (N = 93), the 21 with scheduled repeated practice had higher scores on the laparoscopic knot-tying assessment two weeks after the final repetition (difference = 1.5 of 10 [95% CI: 0.2, 2.8], P = .02). Conclusions Personalized video feedback improves trainees’ procedural performance and perceived workload compared with a task demonstration video. Brief monthly practice sessions support skill acquisition and retention.