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Koga, Shunsuke

0000-0001-8868-9700

Mayo Clinic

Department of Neuroscience, Mayo Clinic, Jacksonville, Florida, USA.

Citations 65

Deep Learning-Based Image Classification in Differentiating Tufted Astrocytes, Astrocytic Plaques, and Neuritic Plaques
Koga, Shunsuke , Ghayal, Nikhil B , Koga, Shunsuke , Dickson, Dennis W.

Journal of Neuropathology & Experimental Neurology | February 12, 2021 | Volume: 80 | Issue: 4 | Pages: 306-312

10.1093/jnen/nlab005 Get It

Abstract This study aimed to develop a deep learning-based image classification model that can differentiate tufted astrocytes (TA), astrocytic plaques (AP), and neuritic plaques (NP) based on images of tissue sections stained with phospho-tau immunohistochemistry. Phospho-tau-immunostained slides from the motor cortex were scanned at 20× magnification. An automated deep learning platform, Google AutoML, was used to create a model for distinguishing TA in progressive supranuclear palsy (PSP) from AP in corticobasal degeneration (CBD) and NP in Alzheimer disease (AD). A total of 1500 images of representative tau lesions were captured from 35 PSP, 27 CBD, and 33 AD patients. Of those, 1332 images were used for training, and 168 images for cross-validation. We tested the model using 100 additional test images taken from 20 patients of each disease. In cross-validation, precision and recall for each individual lesion type were 100% and 98.0% for TA, 98.5% and 98.5% for AP, and 98.0% and 100% for NP, respectively. In a test set, all images of TA and NP were correctly predicted. Only eleven images of AP were predicted to be TA or NP. Our data indicate the potential usefulness of deep learning-based image classification methods to assist in differential diagnosis of tauopathies.
Clinicopathologic and genetic features of multiple system atrophy with Lewy body disease
Koga, Shunsuke , Li, Fuyao , Zhao, Na , Roemer, Shanu F. , Ferman, Tanis J. , Wernick, Anna I. , Walton, Ronald L., Faroqi, Ayman H. , Graff‐Radford, Neill R. , Cheshire, William P. , Ross, Owen A. , Dickson, Dennis W , Koga, Shunsuke , Cheshire, William P , Ross, Owen A , Ferman, Tanis J , Zhao, Na , Li, Fuyao , Dickson, Dennis W.

Brain Pathology | March 31, 2020 | Volume: 30 | Issue: 4 | Pages: 766-778

10.1111/bpa.12839 Get It

AbstractBackground: Abnormal aggregates of α‐synuclein are pathologic hallmarks of multiple system atrophy (MSA) and Lewy body disease (LBD). LBD sometimes coexists with MSA, but the impact of co‐pathology, particularly diffuse LBD, on presentation of MSA has not been studied. We aimed to determine the frequency and clinicopathologic features of MSA with LBD (MSA+LBD). Methods: Using hematoxylin & eosin and α‐synuclein‐immunostained slides, we assessed the distribution and severity of LBD in 230 autopsy‐confirmed MSA patients collected from 1998 to 2018. Alzheimer‐type pathology was assessed to assign the likelihood of clinical presentations of dementia with Lewy body (DLB) using the consensus criteria for DLB. We reviewed medical records to characterize clinicopathologic features of MSA+LBD. Genetic risk factors for LBD, including APOE ε4 allele and mutations in GBA, SNCA, LRRK2, and VPS35, were analyzed. Results: LBD was observed in 11 MSA patients (5%); seven were brainstem type, three were transitional type, and one was diffuse type. The latter four had an intermediate or high likelihood of DLB. Three of the four had an antemortem diagnosis of Parkinson’s disease with dementia (PDD) or clinically probable DLB. Two patients had neuronal loss in the substantia nigra, but not in striatal or olivocerebellar systems with widespread glial cytoplasmic inclusions, consistent with minimal change MSA. In these cases, LBD was considered the primary pathology, and MSA was considered coincidental. APOE ε4 allele frequency was not different between MSA+LBD and MSA without LBD. Two of nine MSA+LBD patients had a risk variant of GBA (p.T408M and p.E365K). Conclusions: Although rare, MSA with transitional or diffuse LBD can develop clinical features of PDD or DLB. Minimal change MSA can be interpreted as a coincidental, but distinct, α‐synucleinopathy in a subset of patients with diffuse LBD.
Association of Tripartite Motif Containing 11 rs564309 With Tau Pathology in Progressive Supranuclear Palsy
Valentino, Rebecca R. , Koga, Shunsuke , Brushaber, Danielle , Diehl, Nancy N. , Walton, Ronald L., Dickson, Dennis W. , Ross, Owen A. , Brushaber, Danielle E, Dickson, Dennis W , Ross, Owen A , Koga, Shunsuke , Heckman, Michael G.

Movement Disorders | March 6, 2020 | Volume: 35 | Issue: 5 | Pages: 890-894

10.1002/mds.28010 Get It

Abstract Background Intronic variant rs564309 in tripartite motif containing 11 (TRIM11 ) is associated with clinical phenotypic differences in progressive supranuclear palsy (PSP), whereby the minor allele (A) is more common in atypical PSP than typical PSP (PSP‐Richardson's syndrome). However, rs564309 has not been investigated relative to neuropathological outcomes. Objective Evaluate the association of rs564309 with the neuropathologically assessed severity of tau pathology, as measured by semi‐quantitative scores for neurofibrillary tangles, tufted astrocytes, neuropil threads, and oligodendroglial coiled bodies. Methods 797 neuropathologically confirmed PSP cases were genotyped for TRIM11 rs564309 and assessed for tau pathology across 20 neuroanatomical regions. Tau pathology measures and age at death were examined for association with TRIM11 rs564309‐A using multivariable linear regression models. Results TRIM11 rs564309‐A was associated with increased neurofibrillary tangles pathology ( P = 0.050), but was not significantly associated with age at death, neuropil threads, coiled bodies, or tufted astrocytes tau pathology scores. Conclusions TRIM11 rs564309 may influence burden of neurofibrillary tangles tau pathology in PSP; further study is warranted. © 2020 International Parkinson and Movement Disorder Society
PET-detectable tau pathology correlates with long-term neuropsychiatric outcomes in patients with traumatic brain injury
Takahata, Keisuke , Kimura, Yasuyuki , Koga, Shunsuke , Ichise, Masanori , Saito, Fumie, Moriguchi, Sho , Kitamura, Soichiro , Kubota, Manabu , Umeda, Satoshi , Niwa, Fumitoshi , Mizushima, Jin, Morimoto, Yoko, Funayama, Michitaka , Tabuchi, Hajime , Bieniek, Kevin F. , Kawamura, Kazunori , Zhang, Ming-Rong, Mimura, Masaru , Kato, Motoichiro, Suhara, Tetsuya , Higuchi, Makoto , Koga, Shunsuke , Sahara, Naruhiko , Shimada, Hitoshi , Morimoto, Yoko, Dickson, Dennis W.

Brain | July 24, 2019 | Volume: 142 | Issue: 10 | Pages: 3265-3279

10.1093/brain/awz238 Get It

Is tau load associated with long-term outcomes of TBI? By using PET to assess tau deposits in patients with chronic TBI, Takahata et al. reveal elevated tau load compared to age-matched controls, and show that the abundance of tau in white matter is associated with late-onset neuropsychiatric symptoms.
Association of MAPT H1 subhaplotypes with neuropathology of lewy body disease
Kasanuki, Koji , Brennan, Rebecca, Vargas, Emily , Soto, Alexandra I., Murray, Melissa E. , Koga, Shunsuke , Ross, Owen A. , Valentino, Rebecca R. , Brennan, Rebecca R, Labbé, Catherine, Vargas, Emily R, Koga, Shunsuke , Ross, Owen A , Murray, Melissa E , Heckman, Michael G. , Labbé, Catherine , Dickson, Dennis W.

Movement Disorders | June 25, 2019 | Volume: 34 | Issue: 9 | Pages: 1325-1332

10.1002/mds.27773 Get It

AbstractBackgroundGenetic variation at the microtubule‐associated protein tau locus is associated with clinical parkinsonism. However, it is unclear as to whether microtubule‐associated protein tau H1 subhaplotypes are associated with the burden of neuropathological features of Lewy body disease.ObjectivesTo evaluate associations of microtubule‐associated protein tau haplotypes with severity of Lewy body pathology and markers of SN neuronal loss in Lewy body disease cases.MethodsFive hundred eighty‐five autopsy‐confirmed Lewy body disease cases were included. Six microtubule‐associated protein tau variants (rs1467967, rs242557, rs3785883, rs2471738, rs8070723, and rs7521) were genotyped to define common microtubule‐associated protein tau haplotypes. Lewy body counts were measured in five cortical regions. Ventrolateral and medial SN neuronal loss were assessed semiquantitatively. Nigrostriatal dopaminergic degeneration was quantified by image analysis of tyrosine hydroxylase immunoreactivity in the dorsolateral and ventromedial putamen.ResultsThe common microtubule‐associated protein tau H2 haplotype did not show a strong effect on pathological burden in Lewy body disease. The rare H1j haplotype (1.3%) was significantly associated with a lower dorsolateral putaminal tyrosine hydroxylase immunoreactivity (and therefore greater dopaminergic degeneration) compared to other microtubule‐associated protein tau haplotypes (P = 0.0016). Microtubule‐associated protein tau H1j was also nominally (P ≤ 0.05) associated with a lower ventromedial putaminal tyrosine hydroxylase immunoreactivity (P = 0.010), but this did not survive multiple testing correction. Other nominally significant associations between microtubule‐associated protein tau H1 subhaplotypes and neuropathological outcomes were observed.ConclusionsA rare microtubule‐associated protein tau H1 subhaplotype (H1j) may be associated with more severe putaminal dopaminergic degeneration in Lewy body disease cases. Microtubule‐associated protein tau H1j has been associated previously with an increased risk of PD, and therefore our exploratory findings provide insight into the mechanism by which H1j modulates PD risk. © 2019 International Parkinson and Movement Disorder Society
Coexistence of Progressive Supranuclear Palsy With Pontocerebellar Atrophy and Myotonic Dystrophy Type 1
Koga, Shunsuke , Ahlskog, J. Eric , DeTure, Michael , Baker, Matt , Roemer, Shanu F. , Rademakers, Rosa , Ross, Owen A. , Dickson, Dennis W. , DeTure, Michael A, Dickson, Dennis W , Koga, Shunsuke , Ross, Owen A , Konno, Takuya

Journal of Neuropathology & Experimental Neurology | June 19, 2019 | Volume: 78 | Issue: 8 | Pages: 756-762

10.1093/jnen/nlz048 Get It

AbstractProgressive supranuclear palsy with predominant cerebellar ataxia (PSP-C) has been reported as a rare clinical subtype, but the underlying pathology of its cerebellar ataxia remains unclear. Here, we report a patient with the coexistence of PSP with pontocerebellar atrophy and myotonic dystrophy type 1 (DM1). A 73-year-old man who was an asymptomatic carrier of DM1 (66 CTG repeats) started developing ataxic gait with multiple falls, visual blurring, double vision, and word finding difficulty at age 62 and was initially diagnosed with multiple system atrophy (MSA). Subsequently, the diagnosis was changed to PSP due to hypometric downward gaze, reduced blink frequency, symmetric bradykinesia, rigidity, and the absence of autonomic dysfunction. He eventually developed delayed grip opening with percussion myotonia at age 72. At autopsy, severe neuronal degeneration and astrogliosis in the pontocerebellar structures suggested MSA, but immunohistochemistry for α-synuclein did not reveal neuronal or glial cytoplasmic inclusions. Immunohistochemistry for phospho-tau and 4-repeat tau confirmed a neuropathological diagnosis of PSP with exceptionally numerous coiled bodies and threads in the pontine base and cerebellar white matter. This unusual distribution of 4-repeat tau pathology and neuronal degeneration with astrogliosis is a plausible clinicopathological substrate of PSP-C.
In vivo binding of a tau imaging probe, [11C]PBB3, in patients with progressive supranuclear palsy
Endo, Hironobu , Shimada, Hitoshi , Ono, Maiko , Koga, Shunsuke , Kitamura, Soichiro , Niwa, Fumitoshi , Hirano, Shigeki , Kimura, Yasuyuki , Ichise, Masanori , Shinotoh, Hitoshi , Zhang, Ming Rong , Kuwabara, Satoshi , Suhara, Tetsuya , Higuchi, Makoto , Koga, Shunsuke , Sahara, Naruhiko , Dickson, Dennis W. , Toda, Tatsushi , Kuwabara, Satoshi

Movement Disorders | March 20, 2019 | Volume: 34 | Issue: 5 | Pages: 744-754

10.1002/mds.27643 Get It

AbstractBackground[11C]pyridinyl‐butadienyl‐benzothiazole 3 is a PET imaging agent designed for capturing pathological tau aggregates in diverse neurodegenerative disorders, and would be of clinical utility for neuropathological investigations of PSP.ObjectivesTo explore the usefulness of [11C]pyridinyl‐butadienyl‐benzothiazole 3/PET in assessing characteristic distributions of tau pathologies and their association with clinical symptoms in the brains of living PSP patients.MethodsWe assessed 13 PSP patients and 13 age‐matched healthy control subjects. Individuals negative for amyloid β PET with [11C]Pittsburgh compound B underwent clinical scoring, MR scans, and [11C]pyridinyl‐butadienyl‐benzothiazole 3/PET.ResultsThere were significant differences in binding potential for [11C]pyridinyl‐butadienyl‐benzothiazole 3 between PSP patients and healthy control subjects (P = 0.02). PSP patients exhibited greater radioligand retention than healthy control subjects in multiple brain regions, including frontoparietal white matter, parietal gray matter, globus pallidus, STN, red nucleus, and cerebellar dentate nucleus. [11C]pyridinyl‐butadienyl‐benzothiazole 3 deposition in frontoparietal white matter, but not gray matter, was correlated with general severity of parkinsonian and PSP symptoms, whereas both gray matter and white matter [11C]pyridinyl‐butadienyl‐benzothiazole 3 accumulations in the frontoparietal cortices were associated with nonverbal cognitive impairments. Autoradiographic and fluorescence labeling with pyridinyl‐butadienyl‐benzothiazole 3 was observed in gray matter and white matter of PSP motor cortex tissues.ConclusionsOur findings support the in vivo detectability of tau fibrils characteristic of PSP by [11C]pyridinyl‐butadienyl‐benzothiazole 3/PET, and imply distinct and synergistic contributions of gray matter and white matte tau pathologies to clinical symptoms. [11C]pyridinyl‐butadienyl‐benzothiazole 3/PET potentially provides a neuroimaging‐based index for the evolution of PSP tau pathologies promoting the deterioration of motor and cognitive functions. © 2019 The Authors. Movement Disorders published by Wiley Periodicals, Inc. on behalf of International Parkinson and Movement Disorder Society.
TDP‐43 pathology in multiple system atrophy: colocalization of TDP‐43 and α‐synuclein in glial cytoplasmic inclusions
Koga, Shunsuke , Lin, W.‐L., Walton, Ronald L., Ross, Owen A. , Koga, Shunsuke , Ross, Owen A , Lin, W.‐L., Dickson, Dennis W.

Neuropathology and Applied Neurobiology | April 16, 2018 | Volume: 44 | Issue: 7 | Pages: 707-721

10.1111/nan.12485 Get It

AimsThis study aimed to assess clinicopathologic features of transactive response DNA‐binding protein of 43 kDa (TDP‐43) pathology and its risk factors in multiple system atrophy (MSA).MethodsParaffin‐embedded sections of the amygdala and basal forebrain from 186 autopsy‐confirmed MSA cases were screened with immunohistochemistry for phospho‐TDP‐43. In cases having TDP‐43 pathology, additional brain regions were assessed. Immunohistochemical and immunofluorescence double‐staining and immunogold electron microscopy (IEM) were performed to evaluate colocalization of TDP‐43 and α‐synuclein. Genetic risk factors for TDP‐43 pathology were also analysed.ResultsImmunohistochemistry showed various morphologies of TDP‐43 pathology in 13 cases (7%), such as subpial astrocytic inclusions, neuronal inclusions, dystrophic neurites, perivascular inclusions and glial cytoplasmic inclusions (GCIs). Multivariable logistic regression models revealed that only advanced age, but not concurrent Alzheimer's disease, argyrophilic grain disease or hippocampal sclerosis, was an independent risk factor for TDP‐43 pathology in MSA (OR: 1.11, 95% CI: 1.04–1.19, P = 0.002). TDP‐43 pathology was restricted to the amygdala in eight cases and extended to the hippocampus in two cases. The remaining three cases had widespread TDP‐43 pathology. Immunohistochemical and immunofluorescence double‐staining and IEM revealed colocalization of α‐synuclein and TDP‐43 in GCIs with granule‐coated filaments. Pilot genetic studies failed to show associations between risk variants of TMEM106B or GRN and TDP‐43 pathology.ConclusionsTDP‐43 pathology is rare in MSA and occurs mainly in the medial temporal lobe. Advanced age is a risk factor for TDP‐43 pathology in MSA. Colocalization of TDP‐43 and α‐synuclein in GCIs suggests possible direct interaction between the two molecules.