Abstract Background High‐resolution MRI is essential for accurate diagnosis and treatment planning, but its clinical acquisition is often constrained by long scanning times, which increase patient discomfort and reduce scanner throughput. While super‐resolution (SR) techniques offer a post‐acquisition solution to enhance resolution, existing deep learning approaches face trade‐offs between reconstruction fidelity and computational efficiency, limiting their clinical applicability. Purpose This study aims to develop an efficient and accurate deep learning framework for MRI SR that preserves fine anatomical detail while maintaining low computational overhead, enabling practical integration into clinical workflows. Materials and Methods We propose a novel SR framework based on multi‐head selective state‐space models (MHSSM) integrated with a lightweight channel multilayer perceptron (MLP). The model employs 2D patch extraction with hybrid scanning strategies (vertical, horizontal, and diagonal) to capture long‐range dependencies while mitigating pixel forgetting. Each MambaFormer block combines MHSSM, depthwise convolutions, and gated channel mixing to balance local and global feature representation. The framework was trained and evaluated on two distinct datasets: 7T brain T1 MP2RAGE maps (142 subjects) and 1.5T prostate T2w MRI (334 subjects). Performance was compared against multiple baselines including Bicubic interpolation, GAN‐based (CycleGAN, Pix2pix, SPSR), transformer‐based (SwinIR), Mamba‐based (MambaIR), and diffusion‐based (I 2 SB, Res‐SRDiff) methods. Results The proposed model demonstrated superior performance across all evaluation metrics while maintaining exceptional computational efficiency. On the 7T brain dataset, our method achieved the highest structural similarity (SSIM: ) and peak signal‐to‐noise ratio (PSNR: dB), along with the best perceptual quality scores (LPIPS: ; GMSD: ). These results represented statistically significant improvements over all baselines (), including a 2.1% SSIM gain over SPSR and a 2.4% PSNR improvement over Res‐SRDiff. For the prostate dataset, the model similarly outperformed competing approaches, achieving SSIM of , PSNR of dB, LPIPS of , and GMSD of . Notably, our framework accomplished these results with only 0.9 million parameters and 57 GFLOPs, representing reductions of 99.8% in parameters and 97.5% in computational operations compared to Res‐SRDiff, while also substantially outperforming SwinIR and MambaIR in both accuracy and efficiency metrics. Conclusion The proposed framework provides a computationally efficient yet accurate solution for MRI SR, delivering well‐defined anatomical details and improved perceptual fidelity across anatomically distinct datasets. By significantly reducing computational demands while maintaining state‐of‐the‐art performance, the model offers strong potential for feasibility toward clinical translation and scalable integration into future imaging workflows.
Transformer‐based synthesis of 7 Tesla‐like T1 contrast from routine clinical magnetic resonance imaging
Abstract Background Ultra‐high‐field 7 Tesla (7T) magnetic resonance imaging (MRI) provides improved resolution and signal‐to‐noise ratio (SNR) over standard clinical field strengths (1.5T, 3T). However, 7T scanners are costly, scarce, and introduce additional challenges such as susceptibility artifacts. Purpose We propose an efficient transformer‐based model (7T‐Restormer) to synthesize 7T‐like MRI (quantitative T1 MP2RAGE maps) from routine 1.5T or 3T T1‐weighted (T1W) images. Methods The proposed method leverages an efficient restoration transformer backbone and spatial attention layers to capture long‐range dependencies and generate high‐quality 7T‐like images. Our model was validated on an institutional dataset, comprised of 35 1.5T and 108 3T T1w MRI paired with corresponding 7T T1 maps of patients with confirmed multiple sclerosis (MS). A total of 141 patient cases (32 128 slices) were randomly divided into 105 (25 1.5T and 80 3T) training cases (19 204 slices), 19 (5 1.5T and 14 3T) validation cases (3476 slices), and 17 (5 1.5T and 12 3T) test cases (3145 slices). The synthetic 7T T1 maps were evaluated by comparing their similarity to the ground truth volumes using peak signal‐to‐noise ratio (PSNR), structural similarity index measure (SSIM), and normalized mean squared error (NMSE), and were compared against ResViT and ResShift. In addition, a blinded reader study was performed in which three clinicians scored the diagnostic image quality of each method on a 5‐point Likert scale (1 = non‐acceptable, 5 = excellent). Statistical significance ( α = 0.05) was assessed using two‐sided paired t ‐tests with Holm correction for multiple comparisons and Wilcoxon signed‐rank tests with Holm correction for reader scores. Effect sizes (Cohen's for paired data) were also computed to quantify practical significance. We interpreted and as small, medium, and large effects. Results For 1.5T inputs, 7T‐Restormer achieved an NMSE of 0.018 ± 0.003, PSNR of 25.0 ± 0.6 dB, and SSIM of 0.870 ± 0.019; for 3T inputs, the corresponding values were 0.019 ± 0.006, 24.5 ± 1.2 dB, and 0.874 ± 0.027. Across both field strengths, 7T‐Restormer provided the lowest NMSE and highest PSNR and SSIM among the three methods, reducing NMSE by approximately 5% and 25% relative to ResShift and ResViT at 1.5T and by 14% and 24% at 3T, respectively, and increasing PSNR by 0.5–1.5 dB (Holm‐adjusted p < 0.05, paired Cohen's = 1.37–6.84). Training on mixed 1.5T+3T data improved performance for 1.5T inputs compared with 1.5T‐only training (e.g., NMSE 0.018 vs. 0.019; p = 0.001, ), without degrading performance for 3T inputs ( p = 0.630, for NMSE). In the blinded reader study, 7T‐Restormer received higher diagnostic quality scores (3.50 ± 0.28) than ResShift (3.00 ± 0.27) and ResViT (2.33 ± 0.27), corresponding to mean improvements of 0.5–1.2 points on the 5‐point scale (Holm‐adjusted p = 0.014 and 0.004; paired Cohen's and 3.24, respectively). Conclusion We propose a novel method for predicting quantitative 7T MP2RAGE maps from 1.5T and 3T T1W scans with higher quality than existing state‐of‐the‐art methods. Future development and application of our approach may enhance diagnostic accuracy, treatment planning, and facilitate downstream tasks by making the benefits of 7T MRI more accessible to standard clinical workflows.
A component method to delineate surgical spine implants for proton Monte Carlo dose calculation
AbstractPurposeMetallic implants have been correlated to local control failure for spinal sarcoma and chordoma patients due to the uncertainty of implant delineation from computed tomography (CT). Such uncertainty can compromise the proton Monte Carlo dose calculation (MCDC) accuracy. A component method is proposed to determine the dimension and volume of the implants from CT images.MethodsThe proposed component method leverages the knowledge of surgical implants from medical supply vendors to predefine accurate contours for each implant component, including tulips, screw bodies, lockers, and rods. A retrospective patient study was conducted to demonstrate the feasibility of the method. The reference implant materials and samples were collected from patient medical records and vendors, Medtronic and NuVasive. Additional CT images with extensive features, such as extended Hounsfield units and various reconstruction diameters, were used to quantify the uncertainty of implant contours.ResultsFor in vivo patient implant estimation, the reference and the component method differences were 0.35, 0.17, and 0.04 cm3for tulips, screw bodies, and rods, respectively. The discrepancies by a conventional threshold method were 5.46, 0.76, and 0.05 cm3, respectively. The mischaracterization of implant materials and dimensions can underdose the clinical target volume coverage by 20 cm3for a patient with eight lumbar implants. The tulip dominates the dosimetry uncertainty as it can be made from titanium or cobalt–chromium alloys by different vendors.ConclusionsA component method was developed and demonstrated using phantom and patient studies with implants. The proposed method provides more accurate implant characterization for proton MCDC and can potentially enhance the treatment quality for proton therapy. The current proof‐of‐concept study is limited to the implant characterization for lumbar spine. Future investigations could be extended to cervical spine and dental implants for head‐and‐neck patients where tight margins are required to spare organs at risk.